RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 PP632Q6XCG6 107 aa6.34□□□□□ -1.39
CLTC-215ENST00000621829 FLNBO75369 2602 aaKnown RBP6.33□□□□□ -1.4
CLTC-215ENST00000621829 KRTAP13-2Q52LG2 175 aa6.32□□□□□ -1.4
CLTC-215ENST00000621829 FRYLO94915 3013 aa6.28□□□□□ -1.4
CLTC-215ENST00000621829 SPEGQ15772 3267 aa6.28□□□□□ -1.4
CLTC-215ENST00000621829 RPS29P62273 56 aaKnown RBP6.28□□□□□ -1.4
CLTC-215ENST00000621829 KRTAP13-1Q8IUC0 172 aa6.26□□□□□ -1.41
CLTC-215ENST00000621829 TEP1Q99973 2627 aaKnown RBP6.26□□□□□ -1.41
CLTC-215ENST00000621829 TACC2O95359 2948 aa6.25□□□□□ -1.41
CLTC-215ENST00000621829 ATMQ13315 3056 aa6.24□□□□□ -1.41
CLTC-215ENST00000621829 Q6ZRN7 208 aaPredicted RBP6.24□□□□□ -1.41
CLTC-215ENST00000621829 SETXQ7Z333 2677 aaKnown RBP6.23□□□□□ -1.41
CLTC-215ENST00000621829 DMXL1Q9Y485 3027 aa6.22□□□□□ -1.41
CLTC-215ENST00000621829 ZZEF1O43149 2961 aa6.22□□□□□ -1.41
CLTC-215ENST00000621829 BOD1L1Q8NFC6 3051 aa6.21□□□□□ -1.42
CLTC-215ENST00000621829 ZNF292O60281 2723 aa6.2□□□□□ -1.42
CLTC-215ENST00000621829 ITPR2Q14571 2701 aa6.19□□□□□ -1.42
CLTC-215ENST00000621829 IGSF10Q6WRI0 2623 aa6.19□□□□□ -1.42
CLTC-215ENST00000621829 DCHS1Q96JQ0 3298 aa6.18□□□□□ -1.42
CLTC-215ENST00000621829 WDFY3Q8IZQ1 3526 aa6.17□□□□□ -1.42
CLTC-215ENST00000621829 KMT2BQ9UMN6 2715 aaPredicted RBP6.16□□□□□ -1.42
CLTC-215ENST00000621829 HIVEP1P15822 2718 aa6.14□□□□□ -1.43
CLTC-215ENST00000621829 ADGRG4Q8IZF6 3080 aa6.14□□□□□ -1.43
CLTC-215ENST00000621829 MYO15AQ9UKN7 3530 aa6.14□□□□□ -1.43
CLTC-215ENST00000621829 CHD9Q3L8U1 2897 aa6.14□□□□□ -1.43
CLTC-215ENST00000621829 CRYBG3Q68DQ2 2970 aa6.13□□□□□ -1.43
CLTC-215ENST00000621829 USP34Q70CQ2 3546 aa6.09□□□□□ -1.43
CLTC-215ENST00000621829 A0A1B0GVY2 172 aa6.08□□□□□ -1.44
CLTC-215ENST00000621829 LOC400499M0QZD8 3231 aa6.03□□□□□ -1.44
CLTC-215ENST00000621829 TNRC18O15417 2968 aaPredicted RBP6.03□□□□□ -1.44
CLTC-215ENST00000621829 TGP01266 2768 aa6.01□□□□□ -1.45
CLTC-215ENST00000621829 KRTAP12-2P59991 146 aa6.01□□□□□ -1.45
CLTC-215ENST00000621829 CELSR2Q9HCU4 2923 aa6□□□□□ -1.45
CLTC-215ENST00000621829 CSMD1Q96PZ7 3565 aa5.99□□□□□ -1.45
CLTC-215ENST00000621829 ASPMQ8IZT6 3477 aa5.98□□□□□ -1.45
CLTC-215ENST00000621829 TPRXLQ17RH7 258 aa5.98□□□□□ -1.45
CLTC-215ENST00000621829 SPTBN5Q9NRC6 3674 aaKnown RBP5.96□□□□□ -1.46
CLTC-215ENST00000621829 XP32Q5T750 250 aa5.95□□□□□ -1.46
CLTC-215ENST00000621829 CELSR1Q9NYQ6 3014 aa5.92□□□□□ -1.46
CLTC-215ENST00000621829 LAMA5O15230 3695 aa5.91□□□□□ -1.46
CLTC-215ENST00000621829 ZFHX4Q86UP3 3567 aa5.88□□□□□ -1.47
CLTC-215ENST00000621829 KRTAP1-4P0C5Y4 121 aa5.86□□□□□ -1.47
CLTC-215ENST00000621829 ZFHX3Q15911 3703 aa5.84□□□□□ -1.48
CLTC-215ENST00000621829 SRRM2Q9UQ35 2752 aaKnown RBP5.82□□□□□ -1.48
CLTC-215ENST00000621829 DCHS2Q6V1P9 2916 aa5.82□□□□□ -1.48
CLTC-215ENST00000621829 KRTAP10-10P60014 251 aa5.81□□□□□ -1.48
CLTC-215ENST00000621829 EYSQ5T1H1 3165 aa5.8□□□□□ -1.48
CLTC-215ENST00000621829 KRTAP13-4Q3LI77 160 aa5.8□□□□□ -1.48
CLTC-215ENST00000621829 NF1P21359 2839 aa5.8□□□□□ -1.48
CLTC-215ENST00000621829 KRTAP12-1P59990 96 aa5.79□□□□□ -1.48
CLTC-215ENST00000621829 PRO2289Q9P1D8 64 aa5.79□□□□□ -1.48
CLTC-215ENST00000621829 KRTAP13-3Q3SY46 172 aa5.79□□□□□ -1.48
CLTC-215ENST00000621829 RELNP78509 3460 aa5.79□□□□□ -1.48
CLTC-215ENST00000621829 PDZD2O15018 2839 aa5.79□□□□□ -1.48
CLTC-215ENST00000621829 FBN2P35556 2912 aa5.79□□□□□ -1.48
CLTC-215ENST00000621829 NIPBLQ6KC79 2804 aaeCLIP5.76□□□□□ -1.493e-6■■■■□ 20
CLTC-215ENST00000621829 DMDP11532 3685 aa5.75□□□□□ -1.49
CLTC-215ENST00000621829 KRTAP15-1Q3LI76 137 aa5.73□□□□□ -1.49
CLTC-215ENST00000621829 SMG1Q96Q15 3661 aaKnown RBP5.73□□□□□ -1.49
CLTC-215ENST00000621829 TENM3Q9P273 2699 aa5.73□□□□□ -1.49
CLTC-215ENST00000621829 TENM1Q9UKZ4 2725 aa5.73□□□□□ -1.49
CLTC-215ENST00000621829 INE1O15225 51 aa5.67□□□□□ -1.5
CLTC-215ENST00000621829 ZANQ9Y493 2812 aa5.65□□□□□ -1.51
CLTC-215ENST00000621829 SPENQ96T58 3664 aaKnown RBP5.63□□□□□ -1.51
CLTC-215ENST00000621829 HRNRQ86YZ3 2850 aaPredicted RBP5.62□□□□□ -1.51
CLTC-215ENST00000621829 CUBNO60494 3623 aa5.61□□□□□ -1.51
CLTC-215ENST00000621829 MXRA5Q9NR99 2828 aa5.6□□□□□ -1.51
CLTC-215ENST00000621829 FLNCQ14315 2725 aa5.6□□□□□ -1.51
CLTC-215ENST00000621829 NBPF19A0A087WUL8 3843 aa5.58□□□□□ -1.52
CLTC-215ENST00000621829 KRTAP3-1Q9BYR8 98 aa5.55□□□□□ -1.52
CLTC-215ENST00000621829 SVEP1Q4LDE5 3571 aa5.55□□□□□ -1.52
CLTC-215ENST00000621829 TENM2Q9NT68 2774 aa5.48□□□□□ -1.53
CLTC-215ENST00000621829 KRTAP10-6P60371 365 aaPredicted RBP5.47□□□□□ -1.53
CLTC-215ENST00000621829 VWFP04275 2813 aa5.47□□□□□ -1.53
CLTC-215ENST00000621829 TENM4Q6N022 2769 aa5.46□□□□□ -1.53
CLTC-215ENST00000621829 PKD1L1Q8TDX9 2849 aa5.43□□□□□ -1.54
CLTC-215ENST00000621829 MEGF8Q7Z7M0 2845 aa5.35□□□□□ -1.55
CLTC-215ENST00000621829 COL7A1Q02388 2944 aa5.34□□□□□ -1.56
CLTC-215ENST00000621829 CRCT1Q9UGL9 99 aa5.34□□□□□ -1.56
CLTC-215ENST00000621829 MUC3AQ02505 3323 aa5.28□□□□□ -1.56
CLTC-215ENST00000621829 VPS13CQ709C8 3753 aa5.28□□□□□ -1.56
CLTC-215ENST00000621829 CSMD3Q7Z407 3707 aa5.26□□□□□ -1.57
CLTC-215ENST00000621829 FBN3Q75N90 2809 aa5.23□□□□□ -1.57
CLTC-215ENST00000621829 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
CLTC-215ENST00000621829 KRTAP3-2Q9BYR7 98 aa5.21□□□□□ -1.58
CLTC-215ENST00000621829 CSMD2Q7Z408 3487 aa5.2□□□□□ -1.58
CLTC-215ENST00000621829 KRTAP10-12P60413 245 aa5.18□□□□□ -1.58
CLTC-215ENST00000621829 KRTAP3-3Q9BYR6 98 aa5.17□□□□□ -1.58
CLTC-215ENST00000621829 FBN1P35555 2871 aaKnown RBP5.15□□□□□ -1.58
CLTC-215ENST00000621829 OTOGQ6ZRI0 2925 aa5.12□□□□□ -1.59
CLTC-215ENST00000621829 TRRAPQ9Y4A5 3859 aa5.11□□□□□ -1.59
CLTC-215ENST00000621829 KRTAP12-3P60328 96 aa5.09□□□□□ -1.6
CLTC-215ENST00000621829 LCE3AQ5TA76 89 aa5.08□□□□□ -1.6
CLTC-215ENST00000621829 ALMS1Q8TCU4 4167 aa5.08□□□□□ -1.6
CLTC-215ENST00000621829 KRTAP10-5P60370 271 aa5.03□□□□□ -1.6
CLTC-215ENST00000621829 AKAP9Q99996 3911 aa5□□□□□ -1.61
CLTC-215ENST00000621829 BSNQ9UPA5 3926 aa4.95□□□□□ -1.62
CLTC-215ENST00000621829 KRTAP21-3Q3LHN1 58 aa4.94□□□□□ -1.62
CLTC-215ENST00000621829 LORP23490 312 aaPredicted RBP4.87□□□□□ -1.63
CLTC-215ENST00000621829 ANK3Q12955 4377 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms