RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 PELP1Q8IZL8 1130 aaKnown RBP19.1■□□□□ 0.65
CLTC-215ENST00000621829 DCAF8L2P0C7V8 631 aa18.72■□□□□ 0.59
CLTC-215ENST00000621829 MYT1Q01538 1121 aa18.63■□□□□ 0.57
CLTC-215ENST00000621829 ERICH6Q7L0X2 663 aa18.58■□□□□ 0.56
CLTC-215ENST00000621829 SUPT5HO00267 1087 aaKnown RBP18.36■□□□□ 0.53
CLTC-215ENST00000621829 EHMT2Q96KQ7 1210 aa18.31■□□□□ 0.52
CLTC-215ENST00000621829 CENPBP07199 599 aaPredicted RBP18.21■□□□□ 0.5
CLTC-215ENST00000621829 CCER1Q8TC90 406 aaPredicted RBP18.19■□□□□ 0.5
CLTC-215ENST00000621829 PCGF6Q9BYE7 350 aa18.09■□□□□ 0.49
CLTC-215ENST00000621829 YTHDC1Q96MU7 727 aaKnown RBP17.88■□□□□ 0.45
CLTC-215ENST00000621829 TTBK1Q5TCY1 1321 aaPredicted RBP17.82■□□□□ 0.44
CLTC-215ENST00000621829 SHROOM4Q9ULL8 1493 aa17.73■□□□□ 0.43
CLTC-215ENST00000621829 NEFLP07196 543 aa17.71■□□□□ 0.43
CLTC-215ENST00000621829 ZEB1P37275 1124 aaPredicted RBP17.67■□□□□ 0.42
CLTC-215ENST00000621829 APLP2Q06481 763 aa17.65■□□□□ 0.42
CLTC-215ENST00000621829 FAM9AQ8IZU1 332 aaPredicted RBP17.46■□□□□ 0.39
CLTC-215ENST00000621829 DAXXQ9UER7 740 aaPredicted RBP17.4■□□□□ 0.38
CLTC-215ENST00000621829 RTL5Q5HYW3 569 aaPredicted RBP17.22■□□□□ 0.35
CLTC-215ENST00000621829 HRCP23327 699 aa17.17■□□□□ 0.34
CLTC-215ENST00000621829 RANGAP1P46060 587 aaPredicted RBP17.16■□□□□ 0.34
CLTC-215ENST00000621829 PPARGC1BQ86YN6 1023 aaKnown RBP17.05■□□□□ 0.32
CLTC-215ENST00000621829 ZNF316A6NFI3 1004 aaPredicted RBP17.02■□□□□ 0.32
CLTC-215ENST00000621829 ATP1B4Q9UN42 357 aaPredicted RBP16.93■□□□□ 0.3
CLTC-215ENST00000621829 TRIM26Q12899 539 aaPredicted RBP16.91■□□□□ 0.3
CLTC-215ENST00000621829 GTF3C3Q9Y5Q9 886 aa16.9■□□□□ 0.3
CLTC-215ENST00000621829 EIF5BO60841 1220 aaKnown RBP16.89■□□□□ 0.29
CLTC-215ENST00000621829 BCANQ96GW7 911 aa16.83■□□□□ 0.29
CLTC-215ENST00000621829 CNGB1Q14028 1251 aaPredicted RBP16.81■□□□□ 0.28
CLTC-215ENST00000621829 DIEXFQ68CQ4 756 aaKnown RBP16.79■□□□□ 0.28
CLTC-215ENST00000621829 TRIM41Q8WV44 630 aa16.79■□□□□ 0.28
CLTC-215ENST00000621829 POLR3GLQ9BT43 218 aa16.79■□□□□ 0.28
CLTC-215ENST00000621829 CLSPNQ9HAW4 1339 aa16.76■□□□□ 0.27
CLTC-215ENST00000621829 UBTFP17480 764 aaKnown RBP16.73■□□□□ 0.27
CLTC-215ENST00000621829 GLIPR1L2Q4G1C9 344 aa16.62■□□□□ 0.25
CLTC-215ENST00000621829 CDK11AQ9UQ88 783 aaPredicted RBP16.62■□□□□ 0.25
CLTC-215ENST00000621829 ITGAEP38570 1179 aa16.55■□□□□ 0.24
CLTC-215ENST00000621829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.52■□□□□ 0.24
CLTC-215ENST00000621829 HNRNPUL2Q1KMD3 747 aaKnown RBP16.47■□□□□ 0.23
CLTC-215ENST00000621829 NISCHQ9Y2I1 1504 aa16.47■□□□□ 0.23
CLTC-215ENST00000621829 ACIN1Q9UKV3 1341 aaKnown RBP16.45■□□□□ 0.22
CLTC-215ENST00000621829 LOC105371045A0A1W2PR82 267 aa16.41■□□□□ 0.22
CLTC-215ENST00000621829 ANP32AP39687 249 aaKnown RBP16.39■□□□□ 0.21
CLTC-215ENST00000621829 NPM2Q86SE8 214 aaKnown RBP16.38■□□□□ 0.21
CLTC-215ENST00000621829 NBR1Q14596 966 aa16.35■□□□□ 0.21
CLTC-215ENST00000621829 SLC4A1APQ9BWU0 796 aaKnown RBP16.31■□□□□ 0.2
CLTC-215ENST00000621829 BCL11AQ9H165 835 aa16.25■□□□□ 0.19
CLTC-215ENST00000621829 ANP32BQ92688 251 aaKnown RBP16.21■□□□□ 0.19
CLTC-215ENST00000621829 ARXQ96QS3 562 aa16.2■□□□□ 0.18
CLTC-215ENST00000621829 ANP32CO43423 234 aa16.17■□□□□ 0.18
CLTC-215ENST00000621829 MYT1LQ9UL68 1186 aa16.16■□□□□ 0.18
CLTC-215ENST00000621829 FKBP8Q14318 412 aa16.14■□□□□ 0.17
CLTC-215ENST00000621829 SCAF1Q9H7N4 1312 aaKnown RBP16.12■□□□□ 0.17
CLTC-215ENST00000621829 ZBTB47Q9UFB7 747 aaPredicted RBP16.1■□□□□ 0.17
CLTC-215ENST00000621829 NEUROD1Q13562 356 aa16.1■□□□□ 0.17
CLTC-215ENST00000621829 CHIC1Q5VXU3 224 aa16.09■□□□□ 0.17
CLTC-215ENST00000621829 CANXP27824 592 aaKnown RBP16.05■□□□□ 0.16
CLTC-215ENST00000621829 RTN4Q9NQC3 1192 aaKnown RBP16.01■□□□□ 0.15
CLTC-215ENST00000621829 HSP90AA1P07900 732 aaKnown RBP15.99■□□□□ 0.15
CLTC-215ENST00000621829 ANP32EQ9BTT0 268 aa15.94■□□□□ 0.14
CLTC-215ENST00000621829 TNNT2P45379 298 aaPredicted RBP15.92■□□□□ 0.14
CLTC-215ENST00000621829 FAM50AQ14320 339 aaKnown RBP15.9■□□□□ 0.14
CLTC-215ENST00000621829 AMER1Q5JTC6 1135 aaPredicted RBP15.87■□□□□ 0.13
CLTC-215ENST00000621829 TRIM52Q96A61 297 aa15.85■□□□□ 0.13
CLTC-215ENST00000621829 ZNF326Q5BKZ1 582 aaKnown RBP15.84■□□□□ 0.13
CLTC-215ENST00000621829 SLC24A1O60721 1099 aa15.83■□□□□ 0.12
CLTC-215ENST00000621829 UPF2Q9HAU5 1272 aaKnown RBP15.83■□□□□ 0.12
CLTC-215ENST00000621829 NAP1L5Q96NT1 182 aaPredicted RBP15.81■□□□□ 0.12
CLTC-215ENST00000621829 TRIM44Q96DX7 344 aaPredicted RBP15.79■□□□□ 0.12
CLTC-215ENST00000621829 CDK11BP21127 795 aaKnown RBP15.77■□□□□ 0.12
CLTC-215ENST00000621829 IRX6P78412 446 aaPredicted RBP15.76■□□□□ 0.11
CLTC-215ENST00000621829 HNRNPUQ00839 825 aaKnown RBP eCLIP15.75■□□□□ 0.11
CLTC-215ENST00000621829 CCDC136Q96JN2 1154 aa15.75■□□□□ 0.11
CLTC-215ENST00000621829 NEFMP07197 916 aa15.67■□□□□ 0.1
CLTC-215ENST00000621829 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.67■□□□□ 0.1
CLTC-215ENST00000621829 FAM9BQ8IZU0 186 aa15.67■□□□□ 0.1
CLTC-215ENST00000621829 SALL2Q9Y467 1007 aaPredicted RBP15.66■□□□□ 0.1
CLTC-215ENST00000621829 DNTTIP2Q5QJE6 756 aaKnown RBP15.64■□□□□ 0.09
CLTC-215ENST00000621829 ERICH6BQ5W0A0 696 aa15.64■□□□□ 0.09
CLTC-215ENST00000621829 ARID4BQ4LE39 1312 aaPredicted RBP15.59■□□□□ 0.09
CLTC-215ENST00000621829 DDX10Q13206 875 aaKnown RBP15.58■□□□□ 0.08
CLTC-215ENST00000621829 LAS1LQ9Y4W2 734 aaKnown RBP15.57■□□□□ 0.08
CLTC-215ENST00000621829 DEKP35659 375 aaKnown RBP15.56■□□□□ 0.08
CLTC-215ENST00000621829 DDRGK1Q96HY6 314 aa15.56■□□□□ 0.08
CLTC-215ENST00000621829 PTMAP06454 111 aaKnown RBP15.55■□□□□ 0.08
CLTC-215ENST00000621829 MIER1Q8N108 512 aa15.55■□□□□ 0.08
CLTC-215ENST00000621829 NCLP19338 710 aaKnown RBP15.52■□□□□ 0.08
CLTC-215ENST00000621829 BECN1Q14457 450 aa15.5■□□□□ 0.07
CLTC-215ENST00000621829 TPRNQ4KMQ1 711 aa15.48■□□□□ 0.07
CLTC-215ENST00000621829 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.47■□□□□ 0.07
CLTC-215ENST00000621829 NOP58Q9Y2X3 529 aaKnown RBP15.47■□□□□ 0.07
CLTC-215ENST00000621829 ARID3AQ99856 593 aa15.45■□□□□ 0.06
CLTC-215ENST00000621829 GOLGA6L22H0YM25 854 aa15.42■□□□□ 0.06
CLTC-215ENST00000621829 PPM1GO15355 546 aaPredicted RBP15.42■□□□□ 0.06
CLTC-215ENST00000621829 TMC1Q8TDI8 760 aa15.38■□□□□ 0.05
CLTC-215ENST00000621829 CSRNP3Q8WYN3 585 aa15.37■□□□□ 0.05
CLTC-215ENST00000621829 PLCB2Q00722 1185 aa15.34■□□□□ 0.05
CLTC-215ENST00000621829 SUPT16HQ9Y5B9 1047 aaKnown RBP15.33■□□□□ 0.04
CLTC-215ENST00000621829 MRS2Q9HD23 443 aa15.32■□□□□ 0.04
CLTC-215ENST00000621829 ZBTB7CA1YPR0 619 aa15.31■□□□□ 0.04
CLTC-215ENST00000621829 TONSLQ96HA7 1378 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms