RNA–Protein interactions for RNA: ENST00000620149.1

SPTSSB-205, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 BASIC

Gene SPTSSB, Length 231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-205ENST00000620149 NDUFA1O15239 70 aa0.13□□□□□ -2.39
SPTSSB-205ENST00000620149 SPRR2AP35326 72 aa0.13□□□□□ -2.39
SPTSSB-205ENST00000620149 CLPSL2Q6UWE3 100 aa0.13□□□□□ -2.39
SPTSSB-205ENST00000620149 FAT4Q6V0I7 4981 aa0.13□□□□□ -2.39
SPTSSB-205ENST00000620149 CLTCL1P53675 1640 aa0.13□□□□□ -2.39
SPTSSB-205ENST00000620149 TRPM2O94759 1503 aa0.13□□□□□ -2.39
SPTSSB-205ENST00000620149 HRNRQ86YZ3 2850 aaPredicted RBP0.12□□□□□ -2.39
SPTSSB-205ENST00000620149 IQGAP1P46940 1657 aa0.12□□□□□ -2.39
SPTSSB-205ENST00000620149 STAB1Q9NY15 2570 aa0.12□□□□□ -2.39
SPTSSB-205ENST00000620149 MAP1BP46821 2468 aaKnown RBP0.12□□□□□ -2.39
SPTSSB-205ENST00000620149 NBASA2RRP1 2371 aa0.12□□□□□ -2.39
SPTSSB-205ENST00000620149 CHD6Q8TD26 2715 aa0.12□□□□□ -2.39
SPTSSB-205ENST00000620149 PKD1L1Q8TDX9 2849 aa0.11□□□□□ -2.39
SPTSSB-205ENST00000620149 ATRQ13535 2644 aa0.11□□□□□ -2.39
SPTSSB-205ENST00000620149 DMBT1Q9UGM3 2413 aaPredicted RBP0.11□□□□□ -2.39
SPTSSB-205ENST00000620149 POLR2KP53803 58 aaKnown RBP0.11□□□□□ -2.39
SPTSSB-205ENST00000620149 RYR3Q15413 4870 aa0.11□□□□□ -2.39
SPTSSB-205ENST00000620149 FLNBO75369 2602 aaKnown RBP0.11□□□□□ -2.39
SPTSSB-205ENST00000620149 IGSF10Q6WRI0 2623 aa0.11□□□□□ -2.39
SPTSSB-205ENST00000620149 KRTAP6-2Q3LI66 62 aa0.1□□□□□ -2.39
SPTSSB-205ENST00000620149 MAST4O15021 2626 aa0.1□□□□□ -2.39
SPTSSB-205ENST00000620149 HMCN2Q8NDA2 5059 aa0.1□□□□□ -2.39
SPTSSB-205ENST00000620149 SPRR2EP22531 72 aa0.09□□□□□ -2.4
SPTSSB-205ENST00000620149 KRTAP20-1Q3LI63 56 aa0.09□□□□□ -2.4
SPTSSB-205ENST00000620149 SYNE1Q8NF91 8797 aaKnown RBP0.09□□□□□ -2.4
SPTSSB-205ENST00000620149 PKD1L2Q7Z442 2459 aa0.08□□□□□ -2.4
SPTSSB-205ENST00000620149 TNXBP22105 4242 aa0.08□□□□□ -2.4
SPTSSB-205ENST00000620149 DEFB1P60022 68 aa0.08□□□□□ -2.4
SPTSSB-205ENST00000620149 HYDINQ4G0P3 5121 aa0.08□□□□□ -2.4
SPTSSB-205ENST00000620149 CREBBPQ92793 2442 aa0.08□□□□□ -2.4
SPTSSB-205ENST00000620149 CSMD3Q7Z407 3707 aa0.08□□□□□ -2.4
SPTSSB-205ENST00000620149 ABCA13Q86UQ4 5058 aa0.08□□□□□ -2.4
SPTSSB-205ENST00000620149 MT1AP04731 61 aa0.07□□□□□ -2.4
SPTSSB-205ENST00000620149 TOMM7Q9P0U1 55 aa0.07□□□□□ -2.4
SPTSSB-205ENST00000620149 TRANK1O15050 2925 aa0.07□□□□□ -2.4
SPTSSB-205ENST00000620149 CELSR1Q9NYQ6 3014 aa0.07□□□□□ -2.4
SPTSSB-205ENST00000620149 CEP290O15078 2479 aa0.07□□□□□ -2.4
SPTSSB-205ENST00000620149 NFAT5O94916 1531 aa0.07□□□□□ -2.4
SPTSSB-205ENST00000620149 MTORP42345 2549 aa0.07□□□□□ -2.4
SPTSSB-205ENST00000620149 BSNQ9UPA5 3926 aa0.06□□□□□ -2.4
SPTSSB-205ENST00000620149 SPRR2FQ96RM1 72 aa0.06□□□□□ -2.4
SPTSSB-205ENST00000620149 LRP1Q07954 4544 aaKnown RBP0.06□□□□□ -2.4
SPTSSB-205ENST00000620149 COL7A1Q02388 2944 aa0.06□□□□□ -2.4
SPTSSB-205ENST00000620149 DSPP15924 2871 aaKnown RBP0.05□□□□□ -2.4
SPTSSB-205ENST00000620149 PRRC2CQ9Y520 2896 aaKnown RBP0.05□□□□□ -2.4
SPTSSB-205ENST00000620149 SONP18583 2426 aaKnown RBP0.05□□□□□ -2.4
SPTSSB-205ENST00000620149 SPG11Q96JI7 2443 aa0.05□□□□□ -2.4
SPTSSB-205ENST00000620149 HECTD1Q9ULT8 2610 aa0.05□□□□□ -2.4
SPTSSB-205ENST00000620149 MYCBP2O75592 4640 aa0.04□□□□□ -2.4
SPTSSB-205ENST00000620149 ACACAQ13085 2346 aa0.04□□□□□ -2.4
SPTSSB-205ENST00000620149 SETXQ7Z333 2677 aaKnown RBP0.04□□□□□ -2.4
SPTSSB-205ENST00000620149 TNRC18O15417 2968 aaPredicted RBP0.04□□□□□ -2.4
SPTSSB-205ENST00000620149 REV3LO60673 3130 aa0.04□□□□□ -2.4
SPTSSB-205ENST00000620149 KRTAP19-7Q3SYF9 63 aa0.04□□□□□ -2.4
SPTSSB-205ENST00000620149 SETD2Q9BYW2 2564 aaPredicted RBP0.04□□□□□ -2.4
SPTSSB-205ENST00000620149 NSD1Q96L73 2696 aaPredicted RBP0.04□□□□□ -2.4
SPTSSB-205ENST00000620149 DCHS2Q6V1P9 2916 aa0.03□□□□□ -2.4
SPTSSB-205ENST00000620149 ATP7AQ04656 1500 aa0.03□□□□□ -2.4
SPTSSB-205ENST00000620149 HIVEP1P15822 2718 aa0.03□□□□□ -2.4
SPTSSB-205ENST00000620149 FLNCQ14315 2725 aa0.03□□□□□ -2.4
SPTSSB-205ENST00000620149 EPPK1P58107 5090 aaKnown RBP0.03□□□□□ -2.4
SPTSSB-205ENST00000620149 SAMD9LQ8IVG5 1584 aa0.03□□□□□ -2.4
SPTSSB-205ENST00000620149 AKAP13Q12802 2813 aa0.03□□□□□ -2.4
SPTSSB-205ENST00000620149 HERC1Q15751 4861 aa0.03□□□□□ -2.4
SPTSSB-205ENST00000620149 KRTAP6-1Q3LI64 71 aa0.03□□□□□ -2.4
SPTSSB-205ENST00000620149 ANK2Q01484 3957 aa0.03□□□□□ -2.41
SPTSSB-205ENST00000620149 TOP2AP11388 1531 aaKnown RBP0.03□□□□□ -2.41
SPTSSB-205ENST00000620149 ZANQ9Y493 2812 aa0.02□□□□□ -2.41
SPTSSB-205ENST00000620149 RPL39P62891 51 aaKnown RBP0.02□□□□□ -2.41
SPTSSB-205ENST00000620149 KRTAP19-8Q3LI54 63 aa0.02□□□□□ -2.41
SPTSSB-205ENST00000620149 FLNAP21333 2647 aaKnown RBP0.01□□□□□ -2.41
SPTSSB-205ENST00000620149 HUWE1Q7Z6Z7 4374 aaKnown RBP0.01□□□□□ -2.41
SPTSSB-205ENST00000620149 LINC01590Q5TEZ4 76 aa0.01□□□□□ -2.41
SPTSSB-205ENST00000620149 STAB2Q8WWQ8 2551 aa0.01□□□□□ -2.41
SPTSSB-205ENST00000620149 COL6A5A8TX70 2615 aa0.01□□□□□ -2.41
SPTSSB-205ENST00000620149 ALMS1Q8TCU4 4167 aa0.01□□□□□ -2.41
SPTSSB-205ENST00000620149 LPAP08519 4548 aa0.01□□□□□ -2.41
SPTSSB-205ENST00000620149 HSPG2P98160 4391 aa0□□□□□ -2.41
SPTSSB-205ENST00000620149 KRTAP8-1Q8IUC2 63 aa0□□□□□ -2.41
SPTSSB-205ENST00000620149 LEAP2Q969E1 77 aa0□□□□□ -2.41
SPTSSB-205ENST00000620149 FAT2Q9NYQ8 4349 aa0□□□□□ -2.41
SPTSSB-205ENST00000620149 USH2AO75445 5202 aa-0□□□□□ -2.41
SPTSSB-205ENST00000620149 ACACBO00763 2458 aa-0.01□□□□□ -2.41
SPTSSB-205ENST00000620149 FAM186AA6NE01 2351 aa-0.01□□□□□ -2.41
SPTSSB-205ENST00000620149 TGP01266 2768 aa-0.01□□□□□ -2.41
SPTSSB-205ENST00000620149 GCN1Q92616 2671 aaKnown RBP-0.01□□□□□ -2.41
SPTSSB-205ENST00000620149 SNRPGP62308 76 aaKnown RBP-0.01□□□□□ -2.41
SPTSSB-205ENST00000620149 RPL39LQ96EH5 51 aaKnown RBP-0.01□□□□□ -2.41
SPTSSB-205ENST00000620149 LRRK2Q5S007 2527 aa-0.01□□□□□ -2.41
SPTSSB-205ENST00000620149 CCDC168Q8NDH2 2452 aa-0.01□□□□□ -2.41
SPTSSB-205ENST00000620149 NF1P21359 2839 aa-0.01□□□□□ -2.41
SPTSSB-205ENST00000620149 KMT2AQ03164 3969 aa-0.02□□□□□ -2.41
SPTSSB-205ENST00000620149 SMR3BP02814 79 aaPredicted RBP-0.02□□□□□ -2.41
SPTSSB-205ENST00000620149 RHPN1-AS1Q9BWJ2 59 aa-0.02□□□□□ -2.41
SPTSSB-205ENST00000620149 SRRM2Q9UQ35 2752 aaKnown RBP-0.02□□□□□ -2.41
SPTSSB-205ENST00000620149 DMXL1Q9Y485 3027 aa-0.03□□□□□ -2.41
SPTSSB-205ENST00000620149 SVEP1Q4LDE5 3571 aa-0.03□□□□□ -2.41
SPTSSB-205ENST00000620149 MT1HP80294 61 aa-0.03□□□□□ -2.41
SPTSSB-205ENST00000620149 DEFB136Q30KP8 78 aa-0.03□□□□□ -2.41
SPTSSB-205ENST00000620149 NBEAL2Q6ZNJ1 2754 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms