RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 LAMA1P25391 3075 aa10.93□□□□□ -0.66
FGFR1-241ENST00000619564 XP32Q5T750 250 aa10.89□□□□□ -0.67
FGFR1-241ENST00000619564 KRTAP1-4P0C5Y4 121 aa10.88□□□□□ -0.67
FGFR1-241ENST00000619564 KALRNO60229 2985 aa10.87□□□□□ -0.67
FGFR1-241ENST00000619564 APCP25054 2843 aa10.87□□□□□ -0.67
FGFR1-241ENST00000619564 REV3LO60673 3130 aa10.86□□□□□ -0.67
FGFR1-241ENST00000619564 NBEAQ8NFP9 2946 aa10.86□□□□□ -0.67
FGFR1-241ENST00000619564 ATMQ13315 3056 aa10.85□□□□□ -0.67
FGFR1-241ENST00000619564 COL12A1Q99715 3063 aa10.8□□□□□ -0.68
FGFR1-241ENST00000619564 KRTAP16-1A8MUX0 517 aa10.77□□□□□ -0.69
FGFR1-241ENST00000619564 DMXL2Q8TDJ6 3036 aa10.75□□□□□ -0.69
FGFR1-241ENST00000619564 CRYBG3Q68DQ2 2970 aa10.75□□□□□ -0.69
FGFR1-241ENST00000619564 NIPBLQ6KC79 2804 aaeCLIP10.75□□□□□ -0.69
FGFR1-241ENST00000619564 KRTAP10-8P60410 259 aa10.74□□□□□ -0.69
FGFR1-241ENST00000619564 A0A1B0GVY2 172 aa10.74□□□□□ -0.69
FGFR1-241ENST00000619564 TPRXLQ17RH7 258 aa10.74□□□□□ -0.69
FGFR1-241ENST00000619564 LRBAP50851 2863 aa10.73□□□□□ -0.69
FGFR1-241ENST00000619564 SPTBN5Q9NRC6 3674 aaKnown RBP10.72□□□□□ -0.69
FGFR1-241ENST00000619564 C10orf95Q9H7T3 257 aa10.7□□□□□ -0.7
FGFR1-241ENST00000619564 COL6A3P12111 3177 aa10.7□□□□□ -0.7
FGFR1-241ENST00000619564 FRYLO94915 3013 aa10.7□□□□□ -0.7
FGFR1-241ENST00000619564 NDUFAF8A1L188 74 aa10.66□□□□□ -0.7
FGFR1-241ENST00000619564 ASH1LQ9NR48 2969 aaKnown RBP10.66□□□□□ -0.7
FGFR1-241ENST00000619564 PP632Q6XCG6 107 aa10.64□□□□□ -0.71
FGFR1-241ENST00000619564 BOD1L1Q8NFC6 3051 aa10.61□□□□□ -0.71
FGFR1-241ENST00000619564 EYSQ5T1H1 3165 aa10.59□□□□□ -0.71
FGFR1-241ENST00000619564 KRTAP10-10P60014 251 aa10.57□□□□□ -0.72
FGFR1-241ENST00000619564 CELSR2Q9HCU4 2923 aa10.57□□□□□ -0.72
FGFR1-241ENST00000619564 SPEGQ15772 3267 aa10.56□□□□□ -0.72
FGFR1-241ENST00000619564 ADGRG4Q8IZF6 3080 aa10.55□□□□□ -0.72
FGFR1-241ENST00000619564 TNRC18O15417 2968 aaPredicted RBP10.53□□□□□ -0.72
FGFR1-241ENST00000619564 KRTAP13-3Q3SY46 172 aa10.51□□□□□ -0.73
FGFR1-241ENST00000619564 ZZEF1O43149 2961 aa10.48□□□□□ -0.73
FGFR1-241ENST00000619564 PRO2289Q9P1D8 64 aa10.47□□□□□ -0.73
FGFR1-241ENST00000619564 DCHS2Q6V1P9 2916 aa10.46□□□□□ -0.73
FGFR1-241ENST00000619564 H0YAA0 97 aa10.4□□□□□ -0.74
FGFR1-241ENST00000619564 CFAP47Q6ZTR5 3102 aa10.35□□□□□ -0.75
FGFR1-241ENST00000619564 USP34Q70CQ2 3546 aa10.35□□□□□ -0.75
FGFR1-241ENST00000619564 TENM3Q9P273 2699 aa10.33□□□□□ -0.76
FGFR1-241ENST00000619564 TENM1Q9UKZ4 2725 aa10.33□□□□□ -0.76
FGFR1-241ENST00000619564 MYO15AQ9UKN7 3530 aa10.31□□□□□ -0.76
FGFR1-241ENST00000619564 ZANQ9Y493 2812 aa10.29□□□□□ -0.76
FGFR1-241ENST00000619564 DMXL1Q9Y485 3027 aa10.29□□□□□ -0.76
FGFR1-241ENST00000619564 P0C880 135 aa10.27□□□□□ -0.77
FGFR1-241ENST00000619564 TENM2Q9NT68 2774 aa10.25□□□□□ -0.77
FGFR1-241ENST00000619564 NF1P21359 2839 aa10.22□□□□□ -0.77
FGFR1-241ENST00000619564 LOC400499M0QZD8 3231 aa10.17□□□□□ -0.78
FGFR1-241ENST00000619564 HRNRQ86YZ3 2850 aaPredicted RBP10.12□□□□□ -0.79
FGFR1-241ENST00000619564 FBN2P35556 2912 aa10.02□□□□□ -0.8
FGFR1-241ENST00000619564 TGP01266 2768 aa9.96□□□□□ -0.81
FGFR1-241ENST00000619564 CELSR1Q9NYQ6 3014 aa9.94□□□□□ -0.82
FGFR1-241ENST00000619564 MXRA5Q9NR99 2828 aa9.91□□□□□ -0.82
FGFR1-241ENST00000619564 PKD1L1Q8TDX9 2849 aa9.87□□□□□ -0.83
FGFR1-241ENST00000619564 WDFY3Q8IZQ1 3526 aa9.86□□□□□ -0.83
FGFR1-241ENST00000619564 KRTAP12-2P59991 146 aa9.84□□□□□ -0.83
FGFR1-241ENST00000619564 RELNP78509 3460 aa9.8□□□□□ -0.84
FGFR1-241ENST00000619564 KRTAP13-4Q3LI77 160 aa9.77□□□□□ -0.85
FGFR1-241ENST00000619564 LAMA5O15230 3695 aa9.72□□□□□ -0.85
FGFR1-241ENST00000619564 VWFP04275 2813 aa9.71□□□□□ -0.86
FGFR1-241ENST00000619564 ASPMQ8IZT6 3477 aa9.7□□□□□ -0.86
FGFR1-241ENST00000619564 DMDP11532 3685 aa9.7□□□□□ -0.86
FGFR1-241ENST00000619564 PDZD2O15018 2839 aa9.68□□□□□ -0.86
FGFR1-241ENST00000619564 ZFHX4Q86UP3 3567 aa9.68□□□□□ -0.86
FGFR1-241ENST00000619564 KRTAP12-1P59990 96 aa9.67□□□□□ -0.86
FGFR1-241ENST00000619564 DCHS1Q96JQ0 3298 aa9.64□□□□□ -0.87
FGFR1-241ENST00000619564 KRTAP3-1Q9BYR8 98 aa9.61□□□□□ -0.87
FGFR1-241ENST00000619564 MUC3AQ02505 3323 aa9.59□□□□□ -0.87
FGFR1-241ENST00000619564 KRTAP15-1Q3LI76 137 aa9.45□□□□□ -0.9
FGFR1-241ENST00000619564 CSMD1Q96PZ7 3565 aa9.38□□□□□ -0.91
FGFR1-241ENST00000619564 SMG1Q96Q15 3661 aaKnown RBP9.36□□□□□ -0.91
FGFR1-241ENST00000619564 MT1HL1P0DM35 61 aa9.35□□□□□ -0.91
FGFR1-241ENST00000619564 KRTAP10-6P60371 365 aaPredicted RBP9.33□□□□□ -0.92
FGFR1-241ENST00000619564 NBPF19A0A087WUL8 3843 aa9.29□□□□□ -0.92
FGFR1-241ENST00000619564 OTOGQ6ZRI0 2925 aa9.27□□□□□ -0.92
FGFR1-241ENST00000619564 SRRM2Q9UQ35 2752 aaKnown RBP9.26□□□□□ -0.93
FGFR1-241ENST00000619564 FBN1P35555 2871 aaKnown RBP9.25□□□□□ -0.93
FGFR1-241ENST00000619564 SVEP1Q4LDE5 3571 aa9.14□□□□□ -0.95
FGFR1-241ENST00000619564 FBN3Q75N90 2809 aa9.13□□□□□ -0.95
FGFR1-241ENST00000619564 ANK3Q12955 4377 aaKnown RBP9.09□□□□□ -0.95
FGFR1-241ENST00000619564 KRTAP10-12P60413 245 aa9.07□□□□□ -0.96
FGFR1-241ENST00000619564 KRTAP4-5Q9BYR2 181 aa9.05□□□□□ -0.96
FGFR1-241ENST00000619564 SPENQ96T58 3664 aaKnown RBP9.05□□□□□ -0.96
FGFR1-241ENST00000619564 MEGF8Q7Z7M0 2845 aa9.04□□□□□ -0.96
FGFR1-241ENST00000619564 ZFHX3Q15911 3703 aa9.03□□□□□ -0.96
FGFR1-241ENST00000619564 KRTAP10-4P60372 401 aaPredicted RBP9□□□□□ -0.97
FGFR1-241ENST00000619564 KRTAP3-3Q9BYR6 98 aa8.98□□□□□ -0.97
FGFR1-241ENST00000619564 KRTAP3-2Q9BYR7 98 aa8.97□□□□□ -0.97
FGFR1-241ENST00000619564 CSMD2Q7Z408 3487 aa8.97□□□□□ -0.97
FGFR1-241ENST00000619564 CRCT1Q9UGL9 99 aa8.94□□□□□ -0.98
FGFR1-241ENST00000619564 BSNQ9UPA5 3926 aa8.93□□□□□ -0.98
FGFR1-241ENST00000619564 COL7A1Q02388 2944 aa8.92□□□□□ -0.98
FGFR1-241ENST00000619564 CUBNO60494 3623 aa8.92□□□□□ -0.98
FGFR1-241ENST00000619564 KRTAP12-3P60328 96 aa8.77□□□□□ -1.01
FGFR1-241ENST00000619564 INE1O15225 51 aa8.73□□□□□ -1.01
FGFR1-241ENST00000619564 TRRAPQ9Y4A5 3859 aa8.69□□□□□ -1.02
FGFR1-241ENST00000619564 HUWE1Q7Z6Z7 4374 aaKnown RBP8.67□□□□□ -1.02
FGFR1-241ENST00000619564 ALMS1Q8TCU4 4167 aa8.64□□□□□ -1.03
FGFR1-241ENST00000619564 KRTAP23-1A1A580 65 aa8.63□□□□□ -1.03
FGFR1-241ENST00000619564 LCE3AQ5TA76 89 aa8.62□□□□□ -1.03
FGFR1-241ENST00000619564 LORP23490 312 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms