RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 PRAC1Q96KF2 57 aa10.44□□□□□ -0.74
ATXN2-227ENST00000616825 TENM3Q9P273 2699 aa10.4□□□□□ -0.74
ATXN2-227ENST00000616825 ZFHX4Q86UP3 3567 aa10.39□□□□□ -0.75
ATXN2-227ENST00000616825 A0A087X002 238 aa10.37□□□□□ -0.75
ATXN2-227ENST00000616825 KRTAP29-1A8MX34 341 aaPredicted RBP10.37□□□□□ -0.75
ATXN2-227ENST00000616825 APCP25054 2843 aa10.37□□□□□ -0.75
ATXN2-227ENST00000616825 CELSR2Q9HCU4 2923 aa10.36□□□□□ -0.75
ATXN2-227ENST00000616825 M0QZ58 72 aa10.36□□□□□ -0.75
ATXN2-227ENST00000616825 ASPMQ8IZT6 3477 aa10.32□□□□□ -0.76
ATXN2-227ENST00000616825 H1FX-AS1Q4G0G2 97 aa10.29□□□□□ -0.76
ATXN2-227ENST00000616825 ROMO1P60602 79 aa10.26□□□□□ -0.77
ATXN2-227ENST00000616825 CSMD1Q96PZ7 3565 aa10.25□□□□□ -0.77
ATXN2-227ENST00000616825 NOTCH2NLQ7Z3S9 236 aa10.22□□□□□ -0.77
ATXN2-227ENST00000616825 A0A0A0MQY5 61 aa10.21□□□□□ -0.77
ATXN2-227ENST00000616825 ASB16-AS1Q495Z4 193 aa10.21□□□□□ -0.78
ATXN2-227ENST00000616825 Q6ZRN7 208 aaPredicted RBP10.21□□□□□ -0.78
ATXN2-227ENST00000616825 CRYBG3Q68DQ2 2970 aa10.2□□□□□ -0.78
ATXN2-227ENST00000616825 ADM2Q7Z4H4 148 aa10.19□□□□□ -0.78
ATXN2-227ENST00000616825 DCHS2Q6V1P9 2916 aa10.18□□□□□ -0.78
ATXN2-227ENST00000616825 PLAC4Q8WY50 150 aa10.18□□□□□ -0.78
ATXN2-227ENST00000616825 SMG1Q96Q15 3661 aaKnown RBP10.18□□□□□ -0.78
ATXN2-227ENST00000616825 KRTAP11-1Q8IUC1 163 aa10.17□□□□□ -0.78
ATXN2-227ENST00000616825 SPATA8Q6RVD6 105 aa10.16□□□□□ -0.78
ATXN2-227ENST00000616825 RPS29P62273 56 aaKnown RBP10.15□□□□□ -0.78
ATXN2-227ENST00000616825 A8MU10 97 aa10.14□□□□□ -0.79
ATXN2-227ENST00000616825 KRTAP7-1Q8IUC3 87 aa10.08□□□□□ -0.8
ATXN2-227ENST00000616825 NF1P21359 2839 aa10.08□□□□□ -0.8
ATXN2-227ENST00000616825 HRNRQ86YZ3 2850 aaPredicted RBP10.06□□□□□ -0.8
ATXN2-227ENST00000616825 ZANQ9Y493 2812 aa10.05□□□□□ -0.8
ATXN2-227ENST00000616825 KRTAP13-2Q52LG2 175 aa10.03□□□□□ -0.8
ATXN2-227ENST00000616825 DMDP11532 3685 aa10.03□□□□□ -0.8
ATXN2-227ENST00000616825 TENM1Q9UKZ4 2725 aa10.02□□□□□ -0.8
ATXN2-227ENST00000616825 KRTAP13-1Q8IUC0 172 aa10□□□□□ -0.81
ATXN2-227ENST00000616825 H3BS24 57 aa10□□□□□ -0.81
ATXN2-227ENST00000616825 MUC3AQ02505 3323 aa9.99□□□□□ -0.81
ATXN2-227ENST00000616825 SPENQ96T58 3664 aaKnown RBP9.97□□□□□ -0.81
ATXN2-227ENST00000616825 LAMA5O15230 3695 aa9.96□□□□□ -0.82
ATXN2-227ENST00000616825 RELNP78509 3460 aa9.95□□□□□ -0.82
ATXN2-227ENST00000616825 A8MUU9 505 aa9.94□□□□□ -0.82
ATXN2-227ENST00000616825 SVEP1Q4LDE5 3571 aa9.93□□□□□ -0.82
ATXN2-227ENST00000616825 FBN2P35556 2912 aa9.91□□□□□ -0.82
ATXN2-227ENST00000616825 A6NN06 94 aa9.89□□□□□ -0.83
ATXN2-227ENST00000616825 C20orf166-AS1Q96NR2 134 aa9.87□□□□□ -0.83
ATXN2-227ENST00000616825 KRTAP21-3Q3LHN1 58 aa9.85□□□□□ -0.83
ATXN2-227ENST00000616825 TENM2Q9NT68 2774 aa9.85□□□□□ -0.83
ATXN2-227ENST00000616825 CELSR1Q9NYQ6 3014 aa9.82□□□□□ -0.84
ATXN2-227ENST00000616825 CUBNO60494 3623 aa9.78□□□□□ -0.84
ATXN2-227ENST00000616825 PKD1L1Q8TDX9 2849 aa9.78□□□□□ -0.84
ATXN2-227ENST00000616825 KRTAP25-1Q3LHN0 102 aa9.73□□□□□ -0.85
ATXN2-227ENST00000616825 MXRA5Q9NR99 2828 aa9.72□□□□□ -0.85
ATXN2-227ENST00000616825 PDZD2O15018 2839 aa9.65□□□□□ -0.86
ATXN2-227ENST00000616825 TNP1P09430 55 aa9.63□□□□□ -0.87
ATXN2-227ENST00000616825 KRTAP16-1A8MUX0 517 aa9.55□□□□□ -0.88
ATXN2-227ENST00000616825 KRTAP1-4P0C5Y4 121 aa9.55□□□□□ -0.88
ATXN2-227ENST00000616825 SRRM2Q9UQ35 2752 aaKnown RBP9.54□□□□□ -0.88
ATXN2-227ENST00000616825 VWFP04275 2813 aa9.53□□□□□ -0.88
ATXN2-227ENST00000616825 XP32Q5T750 250 aa9.48□□□□□ -0.89
ATXN2-227ENST00000616825 TGP01266 2768 aa9.46□□□□□ -0.9
ATXN2-227ENST00000616825 NDUFAF8A1L188 74 aa9.45□□□□□ -0.9
ATXN2-227ENST00000616825 KRTAP10-8P60410 259 aa9.37□□□□□ -0.91
ATXN2-227ENST00000616825 PP632Q6XCG6 107 aa9.35□□□□□ -0.91
ATXN2-227ENST00000616825 TPRXLQ17RH7 258 aa9.34□□□□□ -0.91
ATXN2-227ENST00000616825 C10orf95Q9H7T3 257 aa9.34□□□□□ -0.91
ATXN2-227ENST00000616825 OTOGQ6ZRI0 2925 aa9.31□□□□□ -0.92
ATXN2-227ENST00000616825 A0A1B0GVY2 172 aa9.28□□□□□ -0.92
ATXN2-227ENST00000616825 CSMD2Q7Z408 3487 aa9.21□□□□□ -0.93
ATXN2-227ENST00000616825 H0YAA0 97 aa9.19□□□□□ -0.94
ATXN2-227ENST00000616825 ZFHX3Q15911 3703 aa9.19□□□□□ -0.94
ATXN2-227ENST00000616825 KRTAP10-10P60014 251 aa9.19□□□□□ -0.94
ATXN2-227ENST00000616825 KRTAP13-3Q3SY46 172 aa9.17□□□□□ -0.94
ATXN2-227ENST00000616825 NBPF19A0A087WUL8 3843 aa9.11□□□□□ -0.95
ATXN2-227ENST00000616825 FBN1P35555 2871 aaKnown RBP9.11□□□□□ -0.95
ATXN2-227ENST00000616825 P0C880 135 aa9.09□□□□□ -0.95
ATXN2-227ENST00000616825 BSNQ9UPA5 3926 aa9.08□□□□□ -0.96
ATXN2-227ENST00000616825 PRO2289Q9P1D8 64 aa9.06□□□□□ -0.96
ATXN2-227ENST00000616825 FBN3Q75N90 2809 aa8.9□□□□□ -0.99
ATXN2-227ENST00000616825 VPS13CQ709C8 3753 aa8.89□□□□□ -0.99
ATXN2-227ENST00000616825 COL7A1Q02388 2944 aa8.81□□□□□ -1
ATXN2-227ENST00000616825 MEGF8Q7Z7M0 2845 aa8.68□□□□□ -1.02
ATXN2-227ENST00000616825 KRTAP12-2P59991 146 aa8.62□□□□□ -1.03
ATXN2-227ENST00000616825 KRTAP13-4Q3LI77 160 aa8.57□□□□□ -1.04
ATXN2-227ENST00000616825 TRRAPQ9Y4A5 3859 aa8.56□□□□□ -1.04
ATXN2-227ENST00000616825 KRTAP12-1P59990 96 aa8.54□□□□□ -1.04
ATXN2-227ENST00000616825 ANK3Q12955 4377 aaKnown RBP8.51□□□□□ -1.05
ATXN2-227ENST00000616825 KRTAP3-1Q9BYR8 98 aa8.5□□□□□ -1.05
ATXN2-227ENST00000616825 AKAP9Q99996 3911 aa8.38□□□□□ -1.07
ATXN2-227ENST00000616825 CSMD3Q7Z407 3707 aa8.36□□□□□ -1.07
ATXN2-227ENST00000616825 ZNF469Q96JG9 3925 aaPredicted RBP8.33□□□□□ -1.08
ATXN2-227ENST00000616825 KRTAP10-6P60371 365 aaPredicted RBP8.29□□□□□ -1.08
ATXN2-227ENST00000616825 KRTAP15-1Q3LI76 137 aa8.23□□□□□ -1.09
ATXN2-227ENST00000616825 MT1HL1P0DM35 61 aa8.2□□□□□ -1.1
ATXN2-227ENST00000616825 DNHD1Q96M86 4753 aa8.02□□□□□ -1.13
ATXN2-227ENST00000616825 KRTAP3-2Q9BYR7 98 aa7.97□□□□□ -1.13
ATXN2-227ENST00000616825 KRTAP3-3Q9BYR6 98 aa7.94□□□□□ -1.14
ATXN2-227ENST00000616825 KRTAP10-4P60372 401 aaPredicted RBP7.9□□□□□ -1.15
ATXN2-227ENST00000616825 KRTAP10-12P60413 245 aa7.89□□□□□ -1.15
ATXN2-227ENST00000616825 DNAH10Q8IVF4 4471 aa7.89□□□□□ -1.15
ATXN2-227ENST00000616825 KRTAP4-5Q9BYR2 181 aa7.86□□□□□ -1.15
ATXN2-227ENST00000616825 ALMS1Q8TCU4 4167 aa7.81□□□□□ -1.16
ATXN2-227ENST00000616825 HUWE1Q7Z6Z7 4374 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms