RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CFAP47Q6ZTR5 3102 aa5.48□□□□□ -1.53
CLTCL1-208ENST00000615606 S4R3F8 94 aa5.48□□□□□ -1.53
CLTCL1-208ENST00000615606 DCHS2Q6V1P9 2916 aa5.48□□□□□ -1.53
CLTCL1-208ENST00000615606 MYO15AQ9UKN7 3530 aa5.46□□□□□ -1.53
CLTCL1-208ENST00000615606 Q5VV11 94 aa5.45□□□□□ -1.54
CLTCL1-208ENST00000615606 DMBT1Q9UGM3 2413 aaPredicted RBP5.44□□□□□ -1.54
CLTCL1-208ENST00000615606 ASH1LQ9NR48 2969 aaKnown RBP5.44□□□□□ -1.54
CLTCL1-208ENST00000615606 KRTAP13-2Q52LG2 175 aa5.44□□□□□ -1.54
CLTCL1-208ENST00000615606 PRAC1Q96KF2 57 aa5.43□□□□□ -1.54
CLTCL1-208ENST00000615606 LUZP6Q538Z0 58 aa5.42□□□□□ -1.54
CLTCL1-208ENST00000615606 NF1P21359 2839 aa5.41□□□□□ -1.54
CLTCL1-208ENST00000615606 FBN2P35556 2912 aa5.41□□□□□ -1.54
CLTCL1-208ENST00000615606 FLG2Q5D862 2391 aaPredicted RBP5.4□□□□□ -1.54
CLTCL1-208ENST00000615606 KRTAP29-1A8MX34 341 aaPredicted RBP5.4□□□□□ -1.55
CLTCL1-208ENST00000615606 MXRA5Q9NR99 2828 aa5.39□□□□□ -1.55
CLTCL1-208ENST00000615606 CAMK2N1Q7Z7J9 78 aa5.38□□□□□ -1.55
CLTCL1-208ENST00000615606 PDZD2O15018 2839 aa5.38□□□□□ -1.55
CLTCL1-208ENST00000615606 DMAC1Q96GE9 116 aa5.36□□□□□ -1.55
CLTCL1-208ENST00000615606 H3BS24 57 aa5.36□□□□□ -1.55
CLTCL1-208ENST00000615606 NOTCH2NLQ7Z3S9 236 aa5.34□□□□□ -1.55
CLTCL1-208ENST00000615606 R4GN34 69 aa5.32□□□□□ -1.56
CLTCL1-208ENST00000615606 RPL37P61927 97 aaKnown RBP5.31□□□□□ -1.56
CLTCL1-208ENST00000615606 RELNP78509 3460 aa5.28□□□□□ -1.56
CLTCL1-208ENST00000615606 KRTAP1-4P0C5Y4 121 aa5.27□□□□□ -1.57
CLTCL1-208ENST00000615606 H1FX-AS1Q4G0G2 97 aa5.26□□□□□ -1.57
CLTCL1-208ENST00000615606 OTOGQ6ZRI0 2925 aa5.25□□□□□ -1.57
CLTCL1-208ENST00000615606 TENM2Q9NT68 2774 aa5.25□□□□□ -1.57
CLTCL1-208ENST00000615606 DCHS1Q96JQ0 3298 aa5.24□□□□□ -1.57
CLTCL1-208ENST00000615606 WDFY3Q8IZQ1 3526 aa5.23□□□□□ -1.57
CLTCL1-208ENST00000615606 CELSR1Q9NYQ6 3014 aa5.22□□□□□ -1.57
CLTCL1-208ENST00000615606 TENM1Q9UKZ4 2725 aa5.22□□□□□ -1.57
CLTCL1-208ENST00000615606 M0QZ58 72 aa5.22□□□□□ -1.57
CLTCL1-208ENST00000615606 A8MUU9 505 aa5.21□□□□□ -1.57
CLTCL1-208ENST00000615606 A0A0A0MQY5 61 aa5.21□□□□□ -1.58
CLTCL1-208ENST00000615606 A0A1B0GVY2 172 aa5.21□□□□□ -1.58
CLTCL1-208ENST00000615606 TENM3Q9P273 2699 aa5.21□□□□□ -1.58
CLTCL1-208ENST00000615606 C20orf166-AS1Q96NR2 134 aa5.2□□□□□ -1.58
CLTCL1-208ENST00000615606 ROMO1P60602 79 aa5.2□□□□□ -1.58
CLTCL1-208ENST00000615606 MUC3AQ02505 3323 aa5.2□□□□□ -1.58
CLTCL1-208ENST00000615606 ADM2Q7Z4H4 148 aa5.2□□□□□ -1.58
CLTCL1-208ENST00000615606 LAMA5O15230 3695 aa5.18□□□□□ -1.58
CLTCL1-208ENST00000615606 SPATA8Q6RVD6 105 aa5.16□□□□□ -1.58
CLTCL1-208ENST00000615606 ASPMQ8IZT6 3477 aa5.16□□□□□ -1.58
CLTCL1-208ENST00000615606 PLAC4Q8WY50 150 aa5.15□□□□□ -1.59
CLTCL1-208ENST00000615606 XP32Q5T750 250 aa5.14□□□□□ -1.59
CLTCL1-208ENST00000615606 TPRXLQ17RH7 258 aa5.13□□□□□ -1.59
CLTCL1-208ENST00000615606 NBPF19A0A087WUL8 3843 aa5.13□□□□□ -1.59
CLTCL1-208ENST00000615606 DMDP11532 3685 aa5.13□□□□□ -1.59
CLTCL1-208ENST00000615606 A6NN06 94 aa5.13□□□□□ -1.59
CLTCL1-208ENST00000615606 ZFHX4Q86UP3 3567 aa5.09□□□□□ -1.59
CLTCL1-208ENST00000615606 PKD1L1Q8TDX9 2849 aa5.08□□□□□ -1.6
CLTCL1-208ENST00000615606 ANK3Q12955 4377 aaKnown RBP5.07□□□□□ -1.6
CLTCL1-208ENST00000615606 KRTAP10-8P60410 259 aa5.06□□□□□ -1.6
CLTCL1-208ENST00000615606 VWFP04275 2813 aa5.05□□□□□ -1.6
CLTCL1-208ENST00000615606 FBN1P35555 2871 aaKnown RBP5.05□□□□□ -1.6
CLTCL1-208ENST00000615606 KRTAP25-1Q3LHN0 102 aa5.04□□□□□ -1.6
CLTCL1-208ENST00000615606 A8MU10 97 aa5.03□□□□□ -1.6
CLTCL1-208ENST00000615606 KRTAP13-3Q3SY46 172 aa5.03□□□□□ -1.6
CLTCL1-208ENST00000615606 TGP01266 2768 aa5.02□□□□□ -1.61
CLTCL1-208ENST00000615606 KRTAP16-1A8MUX0 517 aa5.01□□□□□ -1.61
CLTCL1-208ENST00000615606 ZFHX3Q15911 3703 aa5□□□□□ -1.61
CLTCL1-208ENST00000615606 SMG1Q96Q15 3661 aaKnown RBP4.96□□□□□ -1.61
CLTCL1-208ENST00000615606 NDUFAF8A1L188 74 aa4.91□□□□□ -1.62
CLTCL1-208ENST00000615606 CSMD1Q96PZ7 3565 aa4.89□□□□□ -1.63
CLTCL1-208ENST00000615606 BSNQ9UPA5 3926 aa4.86□□□□□ -1.63
CLTCL1-208ENST00000615606 SPENQ96T58 3664 aaKnown RBP4.85□□□□□ -1.63
CLTCL1-208ENST00000615606 CSMD2Q7Z408 3487 aa4.84□□□□□ -1.64
CLTCL1-208ENST00000615606 SVEP1Q4LDE5 3571 aa4.83□□□□□ -1.64
CLTCL1-208ENST00000615606 FBN3Q75N90 2809 aa4.83□□□□□ -1.64
CLTCL1-208ENST00000615606 KRTAP10-10P60014 251 aa4.82□□□□□ -1.64
CLTCL1-208ENST00000615606 TNP1P09430 55 aa4.81□□□□□ -1.64
CLTCL1-208ENST00000615606 TRRAPQ9Y4A5 3859 aa4.79□□□□□ -1.64
CLTCL1-208ENST00000615606 CUBNO60494 3623 aa4.78□□□□□ -1.64
CLTCL1-208ENST00000615606 H0YAA0 97 aa4.72□□□□□ -1.65
CLTCL1-208ENST00000615606 MT1HL1P0DM35 61 aa4.72□□□□□ -1.65
CLTCL1-208ENST00000615606 MEGF8Q7Z7M0 2845 aa4.7□□□□□ -1.66
CLTCL1-208ENST00000615606 C10orf95Q9H7T3 257 aa4.7□□□□□ -1.66
CLTCL1-208ENST00000615606 HUWE1Q7Z6Z7 4374 aaKnown RBP4.7□□□□□ -1.66
CLTCL1-208ENST00000615606 PRO2289Q9P1D8 64 aa4.69□□□□□ -1.66
CLTCL1-208ENST00000615606 P0C880 135 aa4.68□□□□□ -1.66
CLTCL1-208ENST00000615606 PP632Q6XCG6 107 aa4.67□□□□□ -1.66
CLTCL1-208ENST00000615606 KRTAP10-4P60372 401 aaPredicted RBP4.67□□□□□ -1.66
CLTCL1-208ENST00000615606 SRRM2Q9UQ35 2752 aaKnown RBP4.66□□□□□ -1.66
CLTCL1-208ENST00000615606 ALMS1Q8TCU4 4167 aa4.64□□□□□ -1.67
CLTCL1-208ENST00000615606 KRTAP4-5Q9BYR2 181 aa4.62□□□□□ -1.67
CLTCL1-208ENST00000615606 COL7A1Q02388 2944 aa4.61□□□□□ -1.67
CLTCL1-208ENST00000615606 AKAP9Q99996 3911 aa4.58□□□□□ -1.68
CLTCL1-208ENST00000615606 KRTAP3-1Q9BYR8 98 aa4.56□□□□□ -1.68
CLTCL1-208ENST00000615606 DNAH9Q9NYC9 4486 aa4.55□□□□□ -1.68
CLTCL1-208ENST00000615606 ZNF469Q96JG9 3925 aaPredicted RBP4.49□□□□□ -1.69
CLTCL1-208ENST00000615606 VPS13CQ709C8 3753 aa4.49□□□□□ -1.69
CLTCL1-208ENST00000615606 DNHD1Q96M86 4753 aa4.45□□□□□ -1.7
CLTCL1-208ENST00000615606 KRTAP12-2P59991 146 aa4.43□□□□□ -1.7
CLTCL1-208ENST00000615606 DNAH5Q8TE73 4624 aa4.4□□□□□ -1.7
CLTCL1-208ENST00000615606 KRTAP12-1P59990 96 aa4.4□□□□□ -1.71
CLTCL1-208ENST00000615606 KRTAP13-4Q3LI77 160 aa4.37□□□□□ -1.71
CLTCL1-208ENST00000615606 DNAH11Q96DT5 4516 aa4.37□□□□□ -1.71
CLTCL1-208ENST00000615606 KRTAP10-6P60371 365 aaPredicted RBP4.37□□□□□ -1.71
CLTCL1-208ENST00000615606 PLECQ15149 4684 aaKnown RBP4.36□□□□□ -1.71
CLTCL1-208ENST00000615606 DNAH1Q9P2D7 4330 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms