RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 COL6A5A8TX70 2615 aa9.79□□□□□ -0.84
TSKU-205ENST00000612930 ANAPC11Q9NYG5 84 aa9.79□□□□□ -0.84
TSKU-205ENST00000612930 STAB1Q9NY15 2570 aa9.79□□□□□ -0.84
TSKU-205ENST00000612930 PLA2G1BP04054 148 aaKnown RBP9.79□□□□□ -0.84
TSKU-205ENST00000612930 NBEAL1Q6ZS30 2694 aa9.78□□□□□ -0.84
TSKU-205ENST00000612930 UBE2DNLQ8IWF7 75 aa9.77□□□□□ -0.85
TSKU-205ENST00000612930 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.76□□□□□ -0.85
TSKU-205ENST00000612930 KRTAP24-1Q3LI83 254 aa9.74□□□□□ -0.85
TSKU-205ENST00000612930 DMAC1Q96GE9 116 aa9.74□□□□□ -0.85
TSKU-205ENST00000612930 SPINK6Q6UWN8 80 aa9.74□□□□□ -0.85
TSKU-205ENST00000612930 SPATA8Q6RVD6 105 aa9.72□□□□□ -0.85
TSKU-205ENST00000612930 SPACA4Q8TDM5 124 aa9.72□□□□□ -0.85
TSKU-205ENST00000612930 ZNF706Q9Y5V0 76 aaPredicted RBP9.72□□□□□ -0.85
TSKU-205ENST00000612930 A0A1B0GU69 56 aa9.71□□□□□ -0.85
TSKU-205ENST00000612930 RTL8CO15255 209 aa9.71□□□□□ -0.86
TSKU-205ENST00000612930 APLNQ9ULZ1 77 aa9.7□□□□□ -0.86
TSKU-205ENST00000612930 LINC01554Q52M75 96 aa9.68□□□□□ -0.86
TSKU-205ENST00000612930 DNAH7Q8WXX0 4024 aa9.68□□□□□ -0.86
TSKU-205ENST00000612930 PSORS1C2Q9UIG4 136 aa9.67□□□□□ -0.86
TSKU-205ENST00000612930 Q6ZRN7 208 aaPredicted RBP9.66□□□□□ -0.86
TSKU-205ENST00000612930 DNAH8Q96JB1 4490 aa9.65□□□□□ -0.86
TSKU-205ENST00000612930 IGLV5-52A0A0A0MRZ9 124 aa9.64□□□□□ -0.87
TSKU-205ENST00000612930 MIR22HGQ0VDD5 57 aa9.63□□□□□ -0.87
TSKU-205ENST00000612930 STAB2Q8WWQ8 2551 aa9.62□□□□□ -0.87
TSKU-205ENST00000612930 ZNF861PO60384 105 aa9.62□□□□□ -0.87
TSKU-205ENST00000612930 RETNLBQ9BQ08 111 aa9.61□□□□□ -0.87
TSKU-205ENST00000612930 NBDYA0A0U1RRE5 68 aa9.61□□□□□ -0.87
TSKU-205ENST00000612930 FRAS1Q86XX4 4008 aa9.61□□□□□ -0.87
TSKU-205ENST00000612930 UQCR11O14957 56 aa9.59□□□□□ -0.87
TSKU-205ENST00000612930 IGKV2-30P06310 120 aa9.58□□□□□ -0.88
TSKU-205ENST00000612930 CIRBP-AS1Q8TBR5 109 aa9.58□□□□□ -0.88
TSKU-205ENST00000612930 FAM229AH3BQW9 127 aa9.56□□□□□ -0.88
TSKU-205ENST00000612930 DYNC2H1Q8NCM8 4307 aaKnown RBP9.54□□□□□ -0.88
TSKU-205ENST00000612930 CSAG1Q6PB30 78 aa9.51□□□□□ -0.89
TSKU-205ENST00000612930 PLECQ15149 4684 aaKnown RBP9.5□□□□□ -0.89
TSKU-205ENST00000612930 A0A087WTM6 91 aa9.49□□□□□ -0.89
TSKU-205ENST00000612930 HECTD4Q9Y4D8 3996 aa9.48□□□□□ -0.89
TSKU-205ENST00000612930 H3BS24 57 aa9.45□□□□□ -0.9
TSKU-205ENST00000612930 IGLV7-43P04211 117 aa9.44□□□□□ -0.9
TSKU-205ENST00000612930 KRTAP16-1A8MUX0 517 aa9.43□□□□□ -0.9
TSKU-205ENST00000612930 SSBP3-AS1Q7Z2R9 100 aa9.43□□□□□ -0.9
TSKU-205ENST00000612930 IGKV2D-30A0A075B6S6 120 aa9.41□□□□□ -0.9
TSKU-205ENST00000612930 DNAH17Q9UFH2 4485 aa9.41□□□□□ -0.9
TSKU-205ENST00000612930 MGAM2Q2M2H8 2515 aa9.37□□□□□ -0.91
TSKU-205ENST00000612930 VPS13DQ5THJ4 4388 aa9.36□□□□□ -0.91
TSKU-205ENST00000612930 MEGF8Q7Z7M0 2845 aa9.33□□□□□ -0.92
TSKU-205ENST00000612930 NUPR2A6NF83 97 aa9.31□□□□□ -0.92
TSKU-205ENST00000612930 SPINK1P00995 79 aa9.31□□□□□ -0.92
TSKU-205ENST00000612930 KRTAP13-2Q52LG2 175 aa9.31□□□□□ -0.92
TSKU-205ENST00000612930 FBN3Q75N90 2809 aa9.28□□□□□ -0.92
TSKU-205ENST00000612930 TGP01266 2768 aa9.27□□□□□ -0.93
TSKU-205ENST00000612930 DNAH2Q9P225 4427 aa9.26□□□□□ -0.93
TSKU-205ENST00000612930 STARD9Q9P2P6 4700 aa9.26□□□□□ -0.93
TSKU-205ENST00000612930 Q8N1X5 172 aa9.25□□□□□ -0.93
TSKU-205ENST00000612930 Q6ZSA8 131 aa9.24□□□□□ -0.93
TSKU-205ENST00000612930 A8MUU9 505 aa9.23□□□□□ -0.93
TSKU-205ENST00000612930 H0YAA0 97 aa9.23□□□□□ -0.93
TSKU-205ENST00000612930 KMT2AQ03164 3969 aa9.22□□□□□ -0.93
TSKU-205ENST00000612930 LY6G6CO95867 125 aa9.22□□□□□ -0.93
TSKU-205ENST00000612930 C1orf134Q5TEV5 83 aa9.19□□□□□ -0.94
TSKU-205ENST00000612930 KRTAP25-1Q3LHN0 102 aa9.18□□□□□ -0.94
TSKU-205ENST00000612930 LINC00304Q8N9R0 145 aa9.18□□□□□ -0.94
TSKU-205ENST00000612930 DNAH11Q96DT5 4516 aa9.16□□□□□ -0.94
TSKU-205ENST00000612930 PRKDCP78527 4128 aaKnown RBP9.15□□□□□ -0.94
TSKU-205ENST00000612930 TYMSOSQ8TAI1 123 aa9.15□□□□□ -0.95
TSKU-205ENST00000612930 DNAH6Q9C0G6 4158 aa9.12□□□□□ -0.95
TSKU-205ENST00000612930 KRTAP1-4P0C5Y4 121 aa9.09□□□□□ -0.95
TSKU-205ENST00000612930 ROMO1P60602 79 aa9.08□□□□□ -0.96
TSKU-205ENST00000612930 A0A1B0GU33 70 aa9.08□□□□□ -0.96
TSKU-205ENST00000612930 DNAH5Q8TE73 4624 aa9.05□□□□□ -0.96
TSKU-205ENST00000612930 KRTAP10-2P60368 255 aa9.05□□□□□ -0.96
TSKU-205ENST00000612930 J3QL48 77 aa9.03□□□□□ -0.96
TSKU-205ENST00000612930 H1FX-AS1Q4G0G2 97 aa9.03□□□□□ -0.96
TSKU-205ENST00000612930 LRP1BQ9NZR2 4599 aa9.01□□□□□ -0.97
TSKU-205ENST00000612930 KRTAP3-1Q9BYR8 98 aa9.01□□□□□ -0.97
TSKU-205ENST00000612930 FLG2Q5D862 2391 aaPredicted RBP8.98□□□□□ -0.97
TSKU-205ENST00000612930 CRIPTQ9P021 101 aa8.98□□□□□ -0.97
TSKU-205ENST00000612930 KRTAP10-1P60331 282 aa8.93□□□□□ -0.98
TSKU-205ENST00000612930 VPS13BQ7Z7G8 4022 aa8.88□□□□□ -0.99
TSKU-205ENST00000612930 P0C880 135 aa8.88□□□□□ -0.99
TSKU-205ENST00000612930 COX6B2Q6YFQ2 88 aa8.86□□□□□ -0.99
TSKU-205ENST00000612930 DNHD1Q96M86 4753 aa8.84□□□□□ -0.99
TSKU-205ENST00000612930 K7ERS5 55 aa8.84□□□□□ -0.99
TSKU-205ENST00000612930 PKD1P98161 4303 aa8.84□□□□□ -0.99
TSKU-205ENST00000612930 C9orf92A6NGG3 77 aa8.83□□□□□ -1
TSKU-205ENST00000612930 C20orf166-AS1Q96NR2 134 aa8.83□□□□□ -1
TSKU-205ENST00000612930 RPS29P62273 56 aaKnown RBP8.78□□□□□ -1
TSKU-205ENST00000612930 FAT2Q9NYQ8 4349 aa8.72□□□□□ -1.01
TSKU-205ENST00000612930 TPRXLQ17RH7 258 aa8.69□□□□□ -1.02
TSKU-205ENST00000612930 SACSQ9NZJ4 4579 aa8.68□□□□□ -1.02
TSKU-205ENST00000612930 RPL37P61927 97 aaKnown RBP8.67□□□□□ -1.02
TSKU-205ENST00000612930 KRTAP10-6P60371 365 aaPredicted RBP8.66□□□□□ -1.02
TSKU-205ENST00000612930 KRTAP13-4Q3LI77 160 aa8.66□□□□□ -1.02
TSKU-205ENST00000612930 HYDINQ4G0P3 5121 aa8.63□□□□□ -1.03
TSKU-205ENST00000612930 SPINT4Q6UDR6 99 aa8.61□□□□□ -1.03
TSKU-205ENST00000612930 A0A0D9SG42 100 aa8.6□□□□□ -1.03
TSKU-205ENST00000612930 KRTAP3-3Q9BYR6 98 aa8.59□□□□□ -1.03
TSKU-205ENST00000612930 C10orf95Q9H7T3 257 aa8.58□□□□□ -1.04
TSKU-205ENST00000612930 KRTAP3-2Q9BYR7 98 aa8.57□□□□□ -1.04
TSKU-205ENST00000612930 PKHD1L1Q86WI1 4243 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms