RNA–Protein interactions for RNA: ENST00000612303.1

NEAT1-204, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 3 BASIC

Gene NEAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-204ENST00000612303 A0A087WVE0 104 aa7.52□□□□□ -1.21
NEAT1-204ENST00000612303 MYCBP2O75592 4640 aa7.5□□□□□ -1.21
NEAT1-204ENST00000612303 HCG22E2RYF7 251 aa7.49□□□□□ -1.21
NEAT1-204ENST00000612303 C8orf87E5RJ46 101 aa7.49□□□□□ -1.21
NEAT1-204ENST00000612303 IGHV6-1A0A0B4J1U7 121 aa7.48□□□□□ -1.21
NEAT1-204ENST00000612303 FAM236AA0A1B0GUQ0 79 aa7.48□□□□□ -1.21
NEAT1-204ENST00000612303 FAM236BA0A1B0GV22 79 aa7.48□□□□□ -1.21
NEAT1-204ENST00000612303 C8orf17Q9NRJ1 99 aa7.48□□□□□ -1.21
NEAT1-204ENST00000612303 FP248Q71RG6 208 aaPredicted RBP7.47□□□□□ -1.21
NEAT1-204ENST00000612303 MMP24-AS1A0A0U1RRL7 71 aa7.46□□□□□ -1.22
NEAT1-204ENST00000612303 ABCA13Q86UQ4 5058 aa7.45□□□□□ -1.22
NEAT1-204ENST00000612303 LINC00313P59037 77 aa7.45□□□□□ -1.22
NEAT1-204ENST00000612303 CASC2Q6XLA1 102 aa7.45□□□□□ -1.22
NEAT1-204ENST00000612303 hDV103S1A0JD37 113 aa7.44□□□□□ -1.22
NEAT1-204ENST00000612303 J3QL48 77 aa7.44□□□□□ -1.22
NEAT1-204ENST00000612303 WFDC13Q8IUB5 93 aa7.43□□□□□ -1.22
NEAT1-204ENST00000612303 RETNLBQ9BQ08 111 aa7.43□□□□□ -1.22
NEAT1-204ENST00000612303 ATOX1O00244 68 aa7.42□□□□□ -1.22
NEAT1-204ENST00000612303 NOTCH2NLQ7Z3S9 236 aa7.42□□□□□ -1.22
NEAT1-204ENST00000612303 TMEM254Q8TBM7 123 aa7.42□□□□□ -1.22
NEAT1-204ENST00000612303 SMIM20Q8N5G0 67 aa7.41□□□□□ -1.22
NEAT1-204ENST00000612303 MRPL34Q9BQ48 92 aaKnown RBP7.39□□□□□ -1.23
NEAT1-204ENST00000612303 IGLV7-46A0A075B6I9 117 aa7.37□□□□□ -1.23
NEAT1-204ENST00000612303 KRTAP16-1A8MUX0 517 aa7.36□□□□□ -1.23
NEAT1-204ENST00000612303 TRAV7A0A075B6U4 112 aa7.35□□□□□ -1.23
NEAT1-204ENST00000612303 OCR1Q9BZK8 76 aa7.35□□□□□ -1.23
NEAT1-204ENST00000612303 Q8N9P0 234 aaPredicted RBP7.34□□□□□ -1.23
NEAT1-204ENST00000612303 ANAPC13Q9BS18 74 aa7.34□□□□□ -1.23
NEAT1-204ENST00000612303 TP53AIP1Q9HCN2 124 aa7.34□□□□□ -1.23
NEAT1-204ENST00000612303 SERP2Q8N6R1 65 aa7.33□□□□□ -1.24
NEAT1-204ENST00000612303 PRR4Q16378 134 aa7.32□□□□□ -1.24
NEAT1-204ENST00000612303 UQCRQO14949 82 aa7.31□□□□□ -1.24
NEAT1-204ENST00000612303 C9orf92A6NGG3 77 aa7.3□□□□□ -1.24
NEAT1-204ENST00000612303 KRTAP13-3Q3SY46 172 aa7.3□□□□□ -1.24
NEAT1-204ENST00000612303 NDUFS5O43920 106 aa7.29□□□□□ -1.24
NEAT1-204ENST00000612303 C20orf166-AS1Q96NR2 134 aa7.28□□□□□ -1.24
NEAT1-204ENST00000612303 A8MUU9 505 aa7.27□□□□□ -1.25
NEAT1-204ENST00000612303 COX7CP15954 63 aa7.27□□□□□ -1.25
NEAT1-204ENST00000612303 TPRXLQ17RH7 258 aa7.27□□□□□ -1.25
NEAT1-204ENST00000612303 C5orf47Q569G3 176 aa7.27□□□□□ -1.25
NEAT1-204ENST00000612303 PCP4P48539 62 aa7.24□□□□□ -1.25
NEAT1-204ENST00000612303 Q75L30 129 aa7.24□□□□□ -1.25
NEAT1-204ENST00000612303 TRAV22A0A0B4J277 110 aa7.21□□□□□ -1.26
NEAT1-204ENST00000612303 H3BPC8 53 aa7.21□□□□□ -1.26
NEAT1-204ENST00000612303 MP68P56378 58 aa7.21□□□□□ -1.26
NEAT1-204ENST00000612303 PCLOQ9Y6V0 5065 aa7.2□□□□□ -1.26
NEAT1-204ENST00000612303 XP32Q5T750 250 aa7.2□□□□□ -1.26
NEAT1-204ENST00000612303 H0Y9P7 68 aa7.19□□□□□ -1.26
NEAT1-204ENST00000612303 Q5W150 140 aa7.19□□□□□ -1.26
NEAT1-204ENST00000612303 ZCCHC13Q8WW36 166 aaKnown RBP7.18□□□□□ -1.26
NEAT1-204ENST00000612303 RPL37P61927 97 aaKnown RBP7.17□□□□□ -1.26
NEAT1-204ENST00000612303 C20orf197Q8N268 126 aa7.16□□□□□ -1.26
NEAT1-204ENST00000612303 A0A0U1RQV1 116 aa7.15□□□□□ -1.26
NEAT1-204ENST00000612303 CCDC179H3BU77 68 aa7.15□□□□□ -1.26
NEAT1-204ENST00000612303 KLKP1Q107X0 134 aa7.15□□□□□ -1.26
NEAT1-204ENST00000612303 LINC00208Q96KT6 92 aa7.14□□□□□ -1.27
NEAT1-204ENST00000612303 ATP11AUNQ6ZP68 121 aa7.13□□□□□ -1.27
NEAT1-204ENST00000612303 C1orf64Q8NEQ6 169 aa7.13□□□□□ -1.27
NEAT1-204ENST00000612303 LOC101927531A0A1B0GV80 90 aa7.12□□□□□ -1.27
NEAT1-204ENST00000612303 SNURFQ9Y675 71 aa7.1□□□□□ -1.27
NEAT1-204ENST00000612303 NDUFC1O43677 76 aa7.09□□□□□ -1.27
NEAT1-204ENST00000612303 IGKV2-30P06310 120 aa7.08□□□□□ -1.28
NEAT1-204ENST00000612303 CYP4F30PQ9H0H9 118 aa7.07□□□□□ -1.28
NEAT1-204ENST00000612303 SEC61BP60468 96 aaKnown RBP7.04□□□□□ -1.28
NEAT1-204ENST00000612303 C7orf65Q6ZTY9 151 aa7.04□□□□□ -1.28
NEAT1-204ENST00000612303 HERC1Q15751 4861 aa7.04□□□□□ -1.28
NEAT1-204ENST00000612303 LPAP08519 4548 aa7.02□□□□□ -1.28
NEAT1-204ENST00000612303 IGKV2D-30A0A075B6S6 120 aa7.02□□□□□ -1.29
NEAT1-204ENST00000612303 LRP2P98164 4655 aa7.02□□□□□ -1.29
NEAT1-204ENST00000612303 PCOTHQ58A44 107 aa7.02□□□□□ -1.29
NEAT1-204ENST00000612303 CYSTM1Q9H1C7 97 aa7.02□□□□□ -1.29
NEAT1-204ENST00000612303 H7BZZ5 65 aa7.01□□□□□ -1.29
NEAT1-204ENST00000612303 SPINK7P58062 85 aa7□□□□□ -1.29
NEAT1-204ENST00000612303 HMCN2Q8NDA2 5059 aa6.98□□□□□ -1.29
NEAT1-204ENST00000612303 SPANXA2-OT1Q8N9U9 137 aa6.96□□□□□ -1.3
NEAT1-204ENST00000612303 TMEM258P61165 79 aa6.94□□□□□ -1.3
NEAT1-204ENST00000612303 HRES1P13985 223 aa6.93□□□□□ -1.3
NEAT1-204ENST00000612303 ATP5EP56381 51 aaPredicted RBP6.91□□□□□ -1.3
NEAT1-204ENST00000612303 MUC17Q685J3 4493 aa6.91□□□□□ -1.3
NEAT1-204ENST00000612303 FAM236DA0A1B0GTK5 79 aa6.87□□□□□ -1.31
NEAT1-204ENST00000612303 FAM236CP0DP71 79 aa6.87□□□□□ -1.31
NEAT1-204ENST00000612303 C4orf26Q17RF5 130 aa6.85□□□□□ -1.31
NEAT1-204ENST00000612303 COX6B2Q6YFQ2 88 aa6.83□□□□□ -1.32
NEAT1-204ENST00000612303 A8MUN3 132 aa6.82□□□□□ -1.32
NEAT1-204ENST00000612303 MPLKIPQ8TAP9 179 aa6.82□□□□□ -1.32
NEAT1-204ENST00000612303 DMAC1Q96GE9 116 aa6.82□□□□□ -1.32
NEAT1-204ENST00000612303 KRTAP4-1Q9BYQ7 146 aa6.81□□□□□ -1.32
NEAT1-204ENST00000612303 ACYP2P14621 99 aa6.79□□□□□ -1.32
NEAT1-204ENST00000612303 RBM12B-AS1Q9P1G2 102 aa6.79□□□□□ -1.32
NEAT1-204ENST00000612303 KRTAP3-1Q9BYR8 98 aa6.77□□□□□ -1.33
NEAT1-204ENST00000612303 SERP1Q9Y6X1 66 aa6.74□□□□□ -1.33
NEAT1-204ENST00000612303 RPS28P62857 69 aaKnown RBP6.71□□□□□ -1.34
NEAT1-204ENST00000612303 H1FX-AS1Q4G0G2 97 aa6.7□□□□□ -1.34
NEAT1-204ENST00000612303 COA5Q86WW8 74 aa6.7□□□□□ -1.34
NEAT1-204ENST00000612303 KRTAP19-2Q3LHN2 52 aa6.65□□□□□ -1.34
NEAT1-204ENST00000612303 CHKB-CPT1BH3BT56 60 aa6.64□□□□□ -1.35
NEAT1-204ENST00000612303 SVIPQ8NHG7 77 aa6.61□□□□□ -1.35
NEAT1-204ENST00000612303 SPTSSBQ8NFR3 76 aa6.59□□□□□ -1.35
NEAT1-204ENST00000612303 S4R3F8 94 aa6.59□□□□□ -1.35
NEAT1-204ENST00000612303 RNF213Q63HN8 5207 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms