RNA–Protein interactions for RNA: ENST00000612303.1

NEAT1-204, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 3 BASIC

Gene NEAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-204ENST00000612303 TARDBPQ13148 414 aaKnown RBP eCLIP12.38□□□□□ -0.434e-17■■■■□ 25.6
NEAT1-204ENST00000612303 ZRANB2O95218 330 aaKnown RBP eCLIP13.95□□□□□ -0.186e-24■■■□□ 18.9
NEAT1-204ENST00000612303 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.77□□□□□ -0.372e-11■■■□□ 15
NEAT1-204ENST00000612303 TIA1P31483 386 aaKnown RBP eCLIP12.75□□□□□ -0.377e-28■■■□□ 14.7
NEAT1-204ENST00000612303 HNRNPMP52272 730 aaKnown RBP eCLIP19.86■□□□□ 0.772e-56■■□□□ 13.1
NEAT1-204ENST00000612303 FUSP35637 526 aaKnown RBP eCLIP8.44□□□□□ -1.067e-18■■□□□ 12.9
NEAT1-204ENST00000612303 SRSF1Q07955 248 aaKnown RBP eCLIP11.22□□□□□ -0.612e-40■■□□□ 12.4
NEAT1-204ENST00000612303 GTF2F1P35269 517 aaKnown RBP eCLIP13.95□□□□□ -0.183e-73■■□□□ 12
NEAT1-204ENST00000612303 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.48□□□□□ -0.251e-8■■□□□ 11.6
NEAT1-204ENST00000612303 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.77□□□□□ -0.216e-12■■□□□ 11.5
NEAT1-204ENST00000612303 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.29□□□□□ -0.121e-323■□□□□ 11.1
NEAT1-204ENST00000612303 U2AF2P26368 475 aaKnown RBP eCLIP15.38■□□□□ 0.051e-323■□□□□ 11
NEAT1-204ENST00000612303 EWSR1Q01844 656 aaKnown RBP eCLIP10.66□□□□□ -0.77e-34■□□□□ 10.4
NEAT1-204ENST00000612303 PRPF4O43172 522 aaKnown RBP eCLIP13.31□□□□□ -0.284e-64■□□□□ 10.2
NEAT1-204ENST00000612303 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.03□□□□□ -0.481e-70■□□□□ 10
NEAT1-204ENST00000612303 RBFOX2O43251 390 aaKnown RBP eCLIP10.88□□□□□ -0.671e-323■□□□□ 9.7
NEAT1-204ENST00000612303 HLTFQ14527 1009 aaKnown RBP eCLIP13.69□□□□□ -0.227e-6■□□□□ 9.7
NEAT1-204ENST00000612303 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.27□□□□□ -0.131e-323■□□□□ 9.6
NEAT1-204ENST00000612303 HNRNPCP07910 306 aaKnown RBP eCLIP10.9□□□□□ -0.661e-323■□□□□ 9.5
NEAT1-204ENST00000612303 FUBP3Q96I24 572 aaKnown RBP eCLIP14.05□□□□□ -0.169e-43■□□□□ 9.5
NEAT1-204ENST00000612303 RBM15Q96T37 977 aaKnown RBP eCLIP13.59□□□□□ -0.231e-22■□□□□ 9.5
NEAT1-204ENST00000612303 HNRNPUQ00839 825 aaKnown RBP eCLIP17.8■□□□□ 0.445e-59■□□□□ 9.1
NEAT1-204ENST00000612303 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.27■□□□□ 0.846e-86■□□□□ 9
NEAT1-204ENST00000612303 U2AF1Q01081 240 aaKnown RBP eCLIP17.69■□□□□ 0.421e-323■□□□□ 9
NEAT1-204ENST00000612303 BCCIPQ9P287 314 aaKnown RBP eCLIP13.4□□□□□ -0.269e-48■□□□□ 9
NEAT1-204ENST00000612303 TAF15Q92804 592 aaKnown RBP eCLIP10.52□□□□□ -0.732e-54■□□□□ 8.9
NEAT1-204ENST00000612303 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.96□□□□□ -0.338e-26■□□□□ 8.8
NEAT1-204ENST00000612303 SRSF7Q16629 238 aaKnown RBP eCLIP11.22□□□□□ -0.612e-10■□□□□ 8.6
NEAT1-204ENST00000612303 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.58□□□□□ -0.082e-6■□□□□ 8.6
NEAT1-204ENST00000612303 AARSP49588 968 aaKnown RBP eCLIP14.21□□□□□ -0.132e-79■□□□□ 8.4
NEAT1-204ENST00000612303 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.3□□□□□ -0.282e-57■□□□□ 8.4
NEAT1-204ENST00000612303 NONOQ15233 471 aaKnown RBP eCLIP15.23■□□□□ 0.031e-26■□□□□ 8.4
NEAT1-204ENST00000612303 RBM5P52756 815 aaKnown RBP eCLIP15.72■□□□□ 0.111e-323■□□□□ 8.3
NEAT1-204ENST00000612303 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.33□□□□□ -0.66e-55■□□□□ 8.3
NEAT1-204ENST00000612303 AQRO60306 1485 aaKnown RBP eCLIP21.51■■□□□ 1.034e-14■□□□□ 8.2
NEAT1-204ENST00000612303 NCBP2P52298 156 aaKnown RBP eCLIP12.54□□□□□ -0.41e-69■□□□□ 8.1
NEAT1-204ENST00000612303 NIPBLQ6KC79 2804 aaeCLIP10.12□□□□□ -0.791e-29■□□□□ 8
Retrieved 37 of 37 RNA–protein pairs in 4.5 ms