RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 TACC2O95359 2948 aa6.51□□□□□ -1.37
HLCS-207ENST00000612277 CFAP46Q8IYW2 2715 aa6.5□□□□□ -1.37
HLCS-207ENST00000612277 ZNF292O60281 2723 aa6.49□□□□□ -1.37
HLCS-207ENST00000612277 LOC400499M0QZD8 3231 aa6.49□□□□□ -1.37
HLCS-207ENST00000612277 KALRNO60229 2985 aa6.48□□□□□ -1.37
HLCS-207ENST00000612277 STAB1Q9NY15 2570 aa6.47□□□□□ -1.37
HLCS-207ENST00000612277 DCHS1Q96JQ0 3298 aa6.45□□□□□ -1.38
HLCS-207ENST00000612277 ADGRG4Q8IZF6 3080 aa6.45□□□□□ -1.38
HLCS-207ENST00000612277 CHD6Q8TD26 2715 aa6.45□□□□□ -1.38
HLCS-207ENST00000612277 XP32Q5T750 250 aa6.43□□□□□ -1.38
HLCS-207ENST00000612277 GCN1Q92616 2671 aaKnown RBP6.4□□□□□ -1.38
HLCS-207ENST00000612277 BAHCC1Q9P281 2608 aa6.39□□□□□ -1.39
HLCS-207ENST00000612277 WDFY3Q8IZQ1 3526 aa6.39□□□□□ -1.39
HLCS-207ENST00000612277 UNC79Q9P2D8 2635 aa6.38□□□□□ -1.39
HLCS-207ENST00000612277 KRTAP10-10P60014 251 aa6.37□□□□□ -1.39
HLCS-207ENST00000612277 TEX15Q9BXT5 2789 aa6.37□□□□□ -1.39
HLCS-207ENST00000612277 KRTAP12-2P59991 146 aa6.36□□□□□ -1.39
HLCS-207ENST00000612277 ASH1LQ9NR48 2969 aaKnown RBP6.31□□□□□ -1.4
HLCS-207ENST00000612277 DMXL1Q9Y485 3027 aa6.3□□□□□ -1.4
HLCS-207ENST00000612277 KRTAP13-4Q3LI77 160 aa6.29□□□□□ -1.4
HLCS-207ENST00000612277 INE1O15225 51 aa6.27□□□□□ -1.41
HLCS-207ENST00000612277 NOTCH1P46531 2555 aa6.27□□□□□ -1.41
HLCS-207ENST00000612277 MUC3AQ02505 3323 aa6.27□□□□□ -1.41
HLCS-207ENST00000612277 TPRXLQ17RH7 258 aa6.26□□□□□ -1.41
HLCS-207ENST00000612277 NBEAL2Q6ZNJ1 2754 aa6.26□□□□□ -1.41
HLCS-207ENST00000612277 COL6A5A8TX70 2615 aa6.25□□□□□ -1.41
HLCS-207ENST00000612277 KRTAP1-4P0C5Y4 121 aa6.24□□□□□ -1.41
HLCS-207ENST00000612277 ASPMQ8IZT6 3477 aa6.24□□□□□ -1.41
HLCS-207ENST00000612277 FLNCQ14315 2725 aa6.24□□□□□ -1.41
HLCS-207ENST00000612277 STAB2Q8WWQ8 2551 aa6.23□□□□□ -1.41
HLCS-207ENST00000612277 SPTBN5Q9NRC6 3674 aaKnown RBP6.23□□□□□ -1.41
HLCS-207ENST00000612277 UBR5O95071 2799 aaPredicted RBP6.22□□□□□ -1.41
HLCS-207ENST00000612277 ITPR1Q14643 2758 aa6.18□□□□□ -1.42
HLCS-207ENST00000612277 UTP20O75691 2785 aaKnown RBP6.17□□□□□ -1.42
HLCS-207ENST00000612277 KRTAP15-1Q3LI76 137 aa6.17□□□□□ -1.42
HLCS-207ENST00000612277 TNRC18O15417 2968 aaPredicted RBP6.15□□□□□ -1.42
HLCS-207ENST00000612277 CUBNO60494 3623 aa6.14□□□□□ -1.43
HLCS-207ENST00000612277 KRTAP12-1P59990 96 aa6.13□□□□□ -1.43
HLCS-207ENST00000612277 NSD1Q96L73 2696 aaPredicted RBP6.12□□□□□ -1.43
HLCS-207ENST00000612277 IGSF10Q6WRI0 2623 aa6.1□□□□□ -1.43
HLCS-207ENST00000612277 DCHS2Q6V1P9 2916 aa6.1□□□□□ -1.43
HLCS-207ENST00000612277 KRTAP23-1A1A580 65 aa6.1□□□□□ -1.43
HLCS-207ENST00000612277 KRTAP13-3Q3SY46 172 aa6.09□□□□□ -1.43
HLCS-207ENST00000612277 LRBAP50851 2863 aa6.09□□□□□ -1.43
HLCS-207ENST00000612277 ZANQ9Y493 2812 aa6.06□□□□□ -1.44
HLCS-207ENST00000612277 ITPR2Q14571 2701 aa6.05□□□□□ -1.44
HLCS-207ENST00000612277 ZFHX4Q86UP3 3567 aa6.05□□□□□ -1.44
HLCS-207ENST00000612277 NF1P21359 2839 aa6.04□□□□□ -1.44
HLCS-207ENST00000612277 CRYBG3Q68DQ2 2970 aa6.03□□□□□ -1.44
HLCS-207ENST00000612277 CELSR2Q9HCU4 2923 aa6.03□□□□□ -1.44
HLCS-207ENST00000612277 CELSR1Q9NYQ6 3014 aa5.98□□□□□ -1.45
HLCS-207ENST00000612277 LAMA5O15230 3695 aa5.98□□□□□ -1.45
HLCS-207ENST00000612277 KMT2BQ9UMN6 2715 aaPredicted RBP5.98□□□□□ -1.45
HLCS-207ENST00000612277 KRTAP21-3Q3LHN1 58 aa5.96□□□□□ -1.46
HLCS-207ENST00000612277 APCP25054 2843 aa5.95□□□□□ -1.46
HLCS-207ENST00000612277 RELNP78509 3460 aa5.94□□□□□ -1.46
HLCS-207ENST00000612277 NIPBLQ6KC79 2804 aaeCLIP5.94□□□□□ -1.46
HLCS-207ENST00000612277 DMDP11532 3685 aa5.93□□□□□ -1.46
HLCS-207ENST00000612277 FBN2P35556 2912 aa5.93□□□□□ -1.46
HLCS-207ENST00000612277 CSMD1Q96PZ7 3565 aa5.87□□□□□ -1.47
HLCS-207ENST00000612277 HIVEP1P15822 2718 aa5.85□□□□□ -1.47
HLCS-207ENST00000612277 SMG1Q96Q15 3661 aaKnown RBP5.84□□□□□ -1.47
HLCS-207ENST00000612277 SVEP1Q4LDE5 3571 aa5.84□□□□□ -1.48
HLCS-207ENST00000612277 SPENQ96T58 3664 aaKnown RBP5.83□□□□□ -1.48
HLCS-207ENST00000612277 KRTAP3-1Q9BYR8 98 aa5.77□□□□□ -1.49
HLCS-207ENST00000612277 MXRA5Q9NR99 2828 aa5.75□□□□□ -1.49
HLCS-207ENST00000612277 PDZD2O15018 2839 aa5.73□□□□□ -1.49
HLCS-207ENST00000612277 CRCT1Q9UGL9 99 aa5.73□□□□□ -1.49
HLCS-207ENST00000612277 KRTAP10-6P60371 365 aaPredicted RBP5.72□□□□□ -1.49
HLCS-207ENST00000612277 TENM4Q6N022 2769 aa5.71□□□□□ -1.5
HLCS-207ENST00000612277 PKD1L1Q8TDX9 2849 aa5.7□□□□□ -1.5
HLCS-207ENST00000612277 SRRM2Q9UQ35 2752 aaKnown RBP5.69□□□□□ -1.5
HLCS-207ENST00000612277 HRNRQ86YZ3 2850 aaPredicted RBP5.67□□□□□ -1.5
HLCS-207ENST00000612277 FBN1P35555 2871 aaKnown RBP5.65□□□□□ -1.51
HLCS-207ENST00000612277 KRTAP10-12P60413 245 aa5.63□□□□□ -1.51
HLCS-207ENST00000612277 TENM3Q9P273 2699 aa5.63□□□□□ -1.51
HLCS-207ENST00000612277 VWFP04275 2813 aa5.55□□□□□ -1.52
HLCS-207ENST00000612277 TGP01266 2768 aa5.54□□□□□ -1.52
HLCS-207ENST00000612277 ZFHX3Q15911 3703 aa5.53□□□□□ -1.52
HLCS-207ENST00000612277 KRTAP12-3P60328 96 aa5.51□□□□□ -1.53
HLCS-207ENST00000612277 TENM1Q9UKZ4 2725 aa5.49□□□□□ -1.53
HLCS-207ENST00000612277 KRTAP10-5P60370 271 aa5.45□□□□□ -1.54
HLCS-207ENST00000612277 CSMD2Q7Z408 3487 aa5.45□□□□□ -1.54
HLCS-207ENST00000612277 KRTAP3-2Q9BYR7 98 aa5.44□□□□□ -1.54
HLCS-207ENST00000612277 TENM2Q9NT68 2774 aa5.43□□□□□ -1.54
HLCS-207ENST00000612277 OTOGQ6ZRI0 2925 aa5.42□□□□□ -1.54
HLCS-207ENST00000612277 LCE3AQ5TA76 89 aa5.41□□□□□ -1.54
HLCS-207ENST00000612277 KRTAP3-3Q9BYR6 98 aa5.35□□□□□ -1.55
HLCS-207ENST00000612277 COL7A1Q02388 2944 aa5.24□□□□□ -1.57
HLCS-207ENST00000612277 NBPF19A0A087WUL8 3843 aa5.17□□□□□ -1.58
HLCS-207ENST00000612277 KRTAP10-7P60409 375 aaPredicted RBP5.11□□□□□ -1.59
HLCS-207ENST00000612277 MT1HL1P0DM35 61 aa5.08□□□□□ -1.6
HLCS-207ENST00000612277 KRTAP8-1Q8IUC2 63 aa5.06□□□□□ -1.6
HLCS-207ENST00000612277 LORP23490 312 aaPredicted RBP5.01□□□□□ -1.61
HLCS-207ENST00000612277 VPS13CQ709C8 3753 aa5□□□□□ -1.61
HLCS-207ENST00000612277 FBN3Q75N90 2809 aa4.95□□□□□ -1.62
HLCS-207ENST00000612277 ANK3Q12955 4377 aaKnown RBP4.95□□□□□ -1.62
HLCS-207ENST00000612277 MEGF8Q7Z7M0 2845 aa4.94□□□□□ -1.62
HLCS-207ENST00000612277 KRTAP10-4P60372 401 aaPredicted RBP4.93□□□□□ -1.62
HLCS-207ENST00000612277 TRRAPQ9Y4A5 3859 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms