RNA–Protein interactions for RNA: ENST00000611728.1

AC004241.3-201, humanhuman

BASIC

Gene AC004241.3, Length 517 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004241.3-201ENST00000611728 TNRC18O15417 2968 aaPredicted RBP0.67□□□□□ -2.3
AC004241.3-201ENST00000611728 FAT2Q9NYQ8 4349 aa0.67□□□□□ -2.3
AC004241.3-201ENST00000611728 PRKDCP78527 4128 aaKnown RBP0.65□□□□□ -2.31
AC004241.3-201ENST00000611728 HUWE1Q7Z6Z7 4374 aaKnown RBP0.65□□□□□ -2.31
AC004241.3-201ENST00000611728 SETXQ7Z333 2677 aaKnown RBP0.64□□□□□ -2.31
AC004241.3-201ENST00000611728 LRP1Q07954 4544 aaKnown RBP0.64□□□□□ -2.31
AC004241.3-201ENST00000611728 M0QZ58 72 aa0.64□□□□□ -2.31
AC004241.3-201ENST00000611728 MYCBP2O75592 4640 aa0.63□□□□□ -2.31
AC004241.3-201ENST00000611728 MAP1BP46821 2468 aaKnown RBP0.63□□□□□ -2.31
AC004241.3-201ENST00000611728 HRNRQ86YZ3 2850 aaPredicted RBP0.62□□□□□ -2.31
AC004241.3-201ENST00000611728 IGSF10Q6WRI0 2623 aa0.6□□□□□ -2.31
AC004241.3-201ENST00000611728 CACNA1AO00555 2505 aa0.6□□□□□ -2.31
AC004241.3-201ENST00000611728 TNP1P09430 55 aa0.6□□□□□ -2.31
AC004241.3-201ENST00000611728 SNRPGP62308 76 aaKnown RBP0.59□□□□□ -2.31
AC004241.3-201ENST00000611728 FLNBO75369 2602 aaKnown RBP0.57□□□□□ -2.32
AC004241.3-201ENST00000611728 SPRR2AP35326 72 aa0.56□□□□□ -2.32
AC004241.3-201ENST00000611728 PHGR1C9JFL3 82 aa0.55□□□□□ -2.32
AC004241.3-201ENST00000611728 DUOX1Q9NRD9 1551 aa0.54□□□□□ -2.32
AC004241.3-201ENST00000611728 MACF1Q9UPN3 7388 aaKnown RBP0.54□□□□□ -2.32
AC004241.3-201ENST00000611728 MROH2BQ7Z745 1585 aa0.53□□□□□ -2.32
AC004241.3-201ENST00000611728 A0A0C4DFX4 3053 aa0.53□□□□□ -2.32
AC004241.3-201ENST00000611728 DEFB110Q30KQ9 67 aa0.53□□□□□ -2.32
AC004241.3-201ENST00000611728 SPTBN4Q9H254 2564 aa0.53□□□□□ -2.32
AC004241.3-201ENST00000611728 NSD1Q96L73 2696 aaPredicted RBP0.53□□□□□ -2.32
AC004241.3-201ENST00000611728 SRRM2Q9UQ35 2752 aaKnown RBP0.51□□□□□ -2.33
AC004241.3-201ENST00000611728 NF1P21359 2839 aa0.51□□□□□ -2.33
AC004241.3-201ENST00000611728 LPAP08519 4548 aa0.51□□□□□ -2.33
AC004241.3-201ENST00000611728 SYNE2Q8WXH0 6885 aaKnown RBP0.51□□□□□ -2.33
AC004241.3-201ENST00000611728 MUC5ACP98088 5654 aa0.51□□□□□ -2.33
AC004241.3-201ENST00000611728 POLR2KP53803 58 aaKnown RBP0.5□□□□□ -2.33
AC004241.3-201ENST00000611728 CLPSL2Q6UWE3 100 aa0.5□□□□□ -2.33
AC004241.3-201ENST00000611728 MAST4O15021 2626 aa0.5□□□□□ -2.33
AC004241.3-201ENST00000611728 KMT2AQ03164 3969 aa0.49□□□□□ -2.33
AC004241.3-201ENST00000611728 MT1AP04731 61 aa0.48□□□□□ -2.33
AC004241.3-201ENST00000611728 MTORP42345 2549 aa0.48□□□□□ -2.33
AC004241.3-201ENST00000611728 SONP18583 2426 aaKnown RBP0.47□□□□□ -2.33
AC004241.3-201ENST00000611728 DCHS2Q6V1P9 2916 aa0.47□□□□□ -2.33
AC004241.3-201ENST00000611728 KRTAP6-2Q3LI66 62 aa0.47□□□□□ -2.33
AC004241.3-201ENST00000611728 LYSTQ99698 3801 aa0.47□□□□□ -2.33
AC004241.3-201ENST00000611728 FAT4Q6V0I7 4981 aa0.47□□□□□ -2.33
AC004241.3-201ENST00000611728 COL7A1Q02388 2944 aa0.47□□□□□ -2.33
AC004241.3-201ENST00000611728 STAB1Q9NY15 2570 aa0.47□□□□□ -2.33
AC004241.3-201ENST00000611728 GCC2Q8IWJ2 1684 aa0.46□□□□□ -2.34
AC004241.3-201ENST00000611728 FLNCQ14315 2725 aa0.46□□□□□ -2.34
AC004241.3-201ENST00000611728 PDZD2O15018 2839 aa0.46□□□□□ -2.34
AC004241.3-201ENST00000611728 GCN1Q92616 2671 aaKnown RBP0.45□□□□□ -2.34
AC004241.3-201ENST00000611728 DMBT1Q9UGM3 2413 aaPredicted RBP0.44□□□□□ -2.34
AC004241.3-201ENST00000611728 KMT2DO14686 5537 aa0.44□□□□□ -2.34
AC004241.3-201ENST00000611728 ZZEF1O43149 2961 aa0.43□□□□□ -2.34
AC004241.3-201ENST00000611728 FSIP2Q5CZC0 6907 aa0.43□□□□□ -2.34
AC004241.3-201ENST00000611728 ACACAQ13085 2346 aa0.43□□□□□ -2.34
AC004241.3-201ENST00000611728 COL6A5A8TX70 2615 aa0.42□□□□□ -2.34
AC004241.3-201ENST00000611728 SETD2Q9BYW2 2564 aaPredicted RBP0.42□□□□□ -2.34
AC004241.3-201ENST00000611728 SPRR2EP22531 72 aa0.41□□□□□ -2.34
AC004241.3-201ENST00000611728 RPL39P62891 51 aaKnown RBP0.41□□□□□ -2.34
AC004241.3-201ENST00000611728 SPG11Q96JI7 2443 aa0.39□□□□□ -2.35
AC004241.3-201ENST00000611728 DMXL1Q9Y485 3027 aa0.39□□□□□ -2.35
AC004241.3-201ENST00000611728 MDN1Q9NU22 5596 aa0.38□□□□□ -2.35
AC004241.3-201ENST00000611728 PKD1P98161 4303 aa0.37□□□□□ -2.35
AC004241.3-201ENST00000611728 FLNAP21333 2647 aaKnown RBP0.37□□□□□ -2.35
AC004241.3-201ENST00000611728 ANKRD11Q6UB99 2663 aaPredicted RBP0.37□□□□□ -2.35
AC004241.3-201ENST00000611728 COL6A3P12111 3177 aa0.37□□□□□ -2.35
AC004241.3-201ENST00000611728 HMCN2Q8NDA2 5059 aa0.37□□□□□ -2.35
AC004241.3-201ENST00000611728 HSPG2P98160 4391 aa0.37□□□□□ -2.35
AC004241.3-201ENST00000611728 LRRK2Q5S007 2527 aa0.36□□□□□ -2.35
AC004241.3-201ENST00000611728 SPART-AS1P0CW21 52 aa0.36□□□□□ -2.35
AC004241.3-201ENST00000611728 FAM186AA6NE01 2351 aa0.35□□□□□ -2.35
AC004241.3-201ENST00000611728 TACC2O95359 2948 aa0.35□□□□□ -2.35
AC004241.3-201ENST00000611728 ZANQ9Y493 2812 aa0.34□□□□□ -2.35
AC004241.3-201ENST00000611728 VPS13BQ7Z7G8 4022 aa0.34□□□□□ -2.35
AC004241.3-201ENST00000611728 KRTAP8-1Q8IUC2 63 aa0.34□□□□□ -2.36
AC004241.3-201ENST00000611728 SPRR2FQ96RM1 72 aa0.34□□□□□ -2.36
AC004241.3-201ENST00000611728 ANKHD1Q8IWZ3 2542 aaKnown RBP0.33□□□□□ -2.36
AC004241.3-201ENST00000611728 SACSQ9NZJ4 4579 aa0.33□□□□□ -2.36
AC004241.3-201ENST00000611728 RPL39LQ96EH5 51 aaKnown RBP0.32□□□□□ -2.36
AC004241.3-201ENST00000611728 TOMM7Q9P0U1 55 aa0.32□□□□□ -2.36
AC004241.3-201ENST00000611728 ACACBO00763 2458 aa0.31□□□□□ -2.36
AC004241.3-201ENST00000611728 RIF1Q5UIP0 2472 aaKnown RBP0.31□□□□□ -2.36
AC004241.3-201ENST00000611728 TENM2Q9NT68 2774 aa0.31□□□□□ -2.36
AC004241.3-201ENST00000611728 CUBNO60494 3623 aa0.3□□□□□ -2.36
AC004241.3-201ENST00000611728 HECTD4Q9Y4D8 3996 aa0.3□□□□□ -2.36
AC004241.3-201ENST00000611728 LRP1BQ9NZR2 4599 aa0.3□□□□□ -2.36
AC004241.3-201ENST00000611728 NBEAL2Q6ZNJ1 2754 aa0.29□□□□□ -2.36
AC004241.3-201ENST00000611728 TGP01266 2768 aa0.29□□□□□ -2.36
AC004241.3-201ENST00000611728 UTP20O75691 2785 aaKnown RBP0.28□□□□□ -2.37
AC004241.3-201ENST00000611728 TEP1Q99973 2627 aaKnown RBP0.27□□□□□ -2.37
AC004241.3-201ENST00000611728 SVEP1Q4LDE5 3571 aa0.27□□□□□ -2.37
AC004241.3-201ENST00000611728 ANK3Q12955 4377 aaKnown RBP0.27□□□□□ -2.37
AC004241.3-201ENST00000611728 NBEAQ8NFP9 2946 aa0.26□□□□□ -2.37
AC004241.3-201ENST00000611728 PKHD1L1Q86WI1 4243 aa0.26□□□□□ -2.37
AC004241.3-201ENST00000611728 FLGP20930 4061 aaPredicted RBP0.26□□□□□ -2.37
AC004241.3-201ENST00000611728 EPG5Q9HCE0 2579 aa0.25□□□□□ -2.37
AC004241.3-201ENST00000611728 FASNP49327 2511 aaKnown RBP0.25□□□□□ -2.37
AC004241.3-201ENST00000611728 SPRR2GQ9BYE4 73 aa0.24□□□□□ -2.37
AC004241.3-201ENST00000611728 DSTQ03001 7570 aaKnown RBP0.24□□□□□ -2.37
AC004241.3-201ENST00000611728 HIVEP1P15822 2718 aa0.23□□□□□ -2.37
AC004241.3-201ENST00000611728 DNAH3Q8TD57 4116 aa0.23□□□□□ -2.37
AC004241.3-201ENST00000611728 PKHD1P08F94 4074 aa0.22□□□□□ -2.37
AC004241.3-201ENST00000611728 KRTAP19-5Q3LI72 72 aa0.22□□□□□ -2.37
AC004241.3-201ENST00000611728 LEAP2Q969E1 77 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms