RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 Q6ZRN7 208 aaPredicted RBP7.32□□□□□ -1.24
CDH1-212ENST00000611625 A0A1B0GU33 70 aa7.3□□□□□ -1.24
CDH1-212ENST00000611625 DMDP11532 3685 aa7.3□□□□□ -1.24
CDH1-212ENST00000611625 KRTAP10-1P60331 282 aa7.3□□□□□ -1.24
CDH1-212ENST00000611625 LINC01554Q52M75 96 aa7.28□□□□□ -1.24
CDH1-212ENST00000611625 KRTAP13-1Q8IUC0 172 aa7.28□□□□□ -1.24
CDH1-212ENST00000611625 H3BS24 57 aa7.28□□□□□ -1.24
CDH1-212ENST00000611625 A0A0D9SG42 100 aa7.27□□□□□ -1.25
CDH1-212ENST00000611625 CRIPTQ9P021 101 aa7.25□□□□□ -1.25
CDH1-212ENST00000611625 DMBT1Q9UGM3 2413 aaPredicted RBP7.24□□□□□ -1.25
CDH1-212ENST00000611625 SMG1Q96Q15 3661 aaKnown RBP7.2□□□□□ -1.26
CDH1-212ENST00000611625 ASB16-AS1Q495Z4 193 aa7.19□□□□□ -1.26
CDH1-212ENST00000611625 CSMD1Q96PZ7 3565 aa7.19□□□□□ -1.26
CDH1-212ENST00000611625 TENM3Q9P273 2699 aa7.18□□□□□ -1.26
CDH1-212ENST00000611625 TENM4Q6N022 2769 aa7.16□□□□□ -1.26
CDH1-212ENST00000611625 CSAG1Q6PB30 78 aa7.15□□□□□ -1.27
CDH1-212ENST00000611625 CELSR1Q9NYQ6 3014 aa7.15□□□□□ -1.27
CDH1-212ENST00000611625 FLG2Q5D862 2391 aaPredicted RBP7.15□□□□□ -1.27
CDH1-212ENST00000611625 J3QL48 77 aa7.14□□□□□ -1.27
CDH1-212ENST00000611625 A8MU10 97 aa7.12□□□□□ -1.27
CDH1-212ENST00000611625 COX6B2Q6YFQ2 88 aa7.11□□□□□ -1.27
CDH1-212ENST00000611625 KRTAP13-2Q52LG2 175 aa7.1□□□□□ -1.27
CDH1-212ENST00000611625 Q6ZSA8 131 aa7.09□□□□□ -1.27
CDH1-212ENST00000611625 A6NN06 94 aa7.09□□□□□ -1.28
CDH1-212ENST00000611625 SPATA8Q6RVD6 105 aa7.08□□□□□ -1.28
CDH1-212ENST00000611625 TENM1Q9UKZ4 2725 aa7.06□□□□□ -1.28
CDH1-212ENST00000611625 S4R3F8 94 aa7.06□□□□□ -1.28
CDH1-212ENST00000611625 H1FX-AS1Q4G0G2 97 aa7.04□□□□□ -1.28
CDH1-212ENST00000611625 VWFP04275 2813 aa7.01□□□□□ -1.29
CDH1-212ENST00000611625 PDZD2O15018 2839 aa7□□□□□ -1.29
CDH1-212ENST00000611625 RPS29P62273 56 aaKnown RBP7□□□□□ -1.29
CDH1-212ENST00000611625 SVEP1Q4LDE5 3571 aa6.99□□□□□ -1.29
CDH1-212ENST00000611625 RPL37P61927 97 aaKnown RBP6.99□□□□□ -1.29
CDH1-212ENST00000611625 Q5VSD8 79 aa6.97□□□□□ -1.29
CDH1-212ENST00000611625 ROMO1P60602 79 aa6.92□□□□□ -1.3
CDH1-212ENST00000611625 LUZP6Q538Z0 58 aa6.9□□□□□ -1.3
CDH1-212ENST00000611625 ADM2Q7Z4H4 148 aa6.9□□□□□ -1.3
CDH1-212ENST00000611625 CAMK2N1Q7Z7J9 78 aa6.87□□□□□ -1.31
CDH1-212ENST00000611625 OTOGQ6ZRI0 2925 aa6.87□□□□□ -1.31
CDH1-212ENST00000611625 FBN1P35555 2871 aaKnown RBP6.86□□□□□ -1.31
CDH1-212ENST00000611625 SPENQ96T58 3664 aaKnown RBP6.86□□□□□ -1.31
CDH1-212ENST00000611625 R4GN34 69 aa6.85□□□□□ -1.31
CDH1-212ENST00000611625 KRTAP1-4P0C5Y4 121 aa6.84□□□□□ -1.31
CDH1-212ENST00000611625 CUBNO60494 3623 aa6.82□□□□□ -1.32
CDH1-212ENST00000611625 A8MUU9 505 aa6.81□□□□□ -1.32
CDH1-212ENST00000611625 SEC61BP60468 96 aaKnown RBP6.8□□□□□ -1.32
CDH1-212ENST00000611625 C20orf166-AS1Q96NR2 134 aa6.79□□□□□ -1.32
CDH1-212ENST00000611625 TGP01266 2768 aa6.79□□□□□ -1.32
CDH1-212ENST00000611625 NBPF19A0A087WUL8 3843 aa6.78□□□□□ -1.32
CDH1-212ENST00000611625 BSNQ9UPA5 3926 aa6.78□□□□□ -1.32
CDH1-212ENST00000611625 KRTAP25-1Q3LHN0 102 aa6.78□□□□□ -1.32
CDH1-212ENST00000611625 PKD1L1Q8TDX9 2849 aa6.78□□□□□ -1.32
CDH1-212ENST00000611625 M0QZ58 72 aa6.77□□□□□ -1.33
CDH1-212ENST00000611625 KRTAP16-1A8MUX0 517 aa6.76□□□□□ -1.33
CDH1-212ENST00000611625 TENM2Q9NT68 2774 aa6.73□□□□□ -1.33
CDH1-212ENST00000611625 KRTAP13-3Q3SY46 172 aa6.7□□□□□ -1.34
CDH1-212ENST00000611625 CSMD2Q7Z408 3487 aa6.7□□□□□ -1.34
CDH1-212ENST00000611625 A0A0A0MQY5 61 aa6.68□□□□□ -1.34
CDH1-212ENST00000611625 ANK3Q12955 4377 aaKnown RBP6.67□□□□□ -1.34
CDH1-212ENST00000611625 M0R2T5 61 aa6.63□□□□□ -1.35
CDH1-212ENST00000611625 H0YAA0 97 aa6.62□□□□□ -1.35
CDH1-212ENST00000611625 ZFHX3Q15911 3703 aa6.61□□□□□ -1.35
CDH1-212ENST00000611625 KRTAP21-3Q3LHN1 58 aa6.6□□□□□ -1.35
CDH1-212ENST00000611625 NDUFAF8A1L188 74 aa6.59□□□□□ -1.35
CDH1-212ENST00000611625 TRRAPQ9Y4A5 3859 aa6.57□□□□□ -1.36
CDH1-212ENST00000611625 XP32Q5T750 250 aa6.54□□□□□ -1.36
CDH1-212ENST00000611625 FBN3Q75N90 2809 aa6.53□□□□□ -1.36
CDH1-212ENST00000611625 SRRM2Q9UQ35 2752 aaKnown RBP6.52□□□□□ -1.37
CDH1-212ENST00000611625 VPS13CQ709C8 3753 aa6.43□□□□□ -1.38
CDH1-212ENST00000611625 C10orf95Q9H7T3 257 aa6.41□□□□□ -1.38
CDH1-212ENST00000611625 MEGF8Q7Z7M0 2845 aa6.41□□□□□ -1.38
CDH1-212ENST00000611625 PLAC4Q8WY50 150 aa6.38□□□□□ -1.39
CDH1-212ENST00000611625 P0C880 135 aa6.38□□□□□ -1.39
CDH1-212ENST00000611625 A0A1B0GVY2 172 aa6.35□□□□□ -1.39
CDH1-212ENST00000611625 TPRXLQ17RH7 258 aa6.34□□□□□ -1.39
CDH1-212ENST00000611625 KRTAP10-8P60410 259 aa6.32□□□□□ -1.4
CDH1-212ENST00000611625 KRTAP3-1Q9BYR8 98 aa6.3□□□□□ -1.4
CDH1-212ENST00000611625 COL7A1Q02388 2944 aa6.25□□□□□ -1.41
CDH1-212ENST00000611625 ZNF469Q96JG9 3925 aaPredicted RBP6.25□□□□□ -1.41
CDH1-212ENST00000611625 TNP1P09430 55 aa6.25□□□□□ -1.41
CDH1-212ENST00000611625 HUWE1Q7Z6Z7 4374 aaKnown RBP6.21□□□□□ -1.42
CDH1-212ENST00000611625 PP632Q6XCG6 107 aa6.19□□□□□ -1.42
CDH1-212ENST00000611625 AKAP9Q99996 3911 aa6.16□□□□□ -1.42
CDH1-212ENST00000611625 KRTAP12-2P59991 146 aa6.15□□□□□ -1.42
CDH1-212ENST00000611625 KRTAP10-6P60371 365 aaPredicted RBP6.09□□□□□ -1.43
CDH1-212ENST00000611625 KRTAP12-1P59990 96 aa6.09□□□□□ -1.44
CDH1-212ENST00000611625 KRTAP13-4Q3LI77 160 aa6.07□□□□□ -1.44
CDH1-212ENST00000611625 CSMD3Q7Z407 3707 aa6.03□□□□□ -1.44
CDH1-212ENST00000611625 KRTAP10-4P60372 401 aaPredicted RBP5.96□□□□□ -1.45
CDH1-212ENST00000611625 DNAH9Q9NYC9 4486 aa5.96□□□□□ -1.46
CDH1-212ENST00000611625 KRTAP3-3Q9BYR6 98 aa5.94□□□□□ -1.46
CDH1-212ENST00000611625 KRTAP3-2Q9BYR7 98 aa5.93□□□□□ -1.46
CDH1-212ENST00000611625 MT1HL1P0DM35 61 aa5.9□□□□□ -1.47
CDH1-212ENST00000611625 KRTAP10-10P60014 251 aa5.9□□□□□ -1.47
CDH1-212ENST00000611625 PLECQ15149 4684 aaKnown RBP5.88□□□□□ -1.47
CDH1-212ENST00000611625 DNAH1Q9P2D7 4330 aa5.84□□□□□ -1.47
CDH1-212ENST00000611625 DNAH10Q8IVF4 4471 aa5.84□□□□□ -1.48
CDH1-212ENST00000611625 DNAH11Q96DT5 4516 aa5.79□□□□□ -1.48
CDH1-212ENST00000611625 DNAH5Q8TE73 4624 aa5.77□□□□□ -1.49
CDH1-212ENST00000611625 VPS13DQ5THJ4 4388 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms