RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 ATP11AUNQ6ZP68 121 aa10.11□□□□□ -0.79
TNIP1-220ENST00000610535 WWC2-AS2Q96NR7 200 aa10.11□□□□□ -0.79
TNIP1-220ENST00000610535 LINC01558Q9Y6Z2 57 aa10.1□□□□□ -0.79
TNIP1-220ENST00000610535 FRAS1Q86XX4 4008 aa10.1□□□□□ -0.79
TNIP1-220ENST00000610535 KTN1-AS1Q86SY8 53 aa10.1□□□□□ -0.79
TNIP1-220ENST00000610535 KMT2AQ03164 3969 aa10.09□□□□□ -0.79
TNIP1-220ENST00000610535 CDC42SE1Q9NRR8 79 aa10.08□□□□□ -0.8
TNIP1-220ENST00000610535 PLAC8Q9NZF1 115 aa10.08□□□□□ -0.8
TNIP1-220ENST00000610535 SPINK7P58062 85 aa10.07□□□□□ -0.8
TNIP1-220ENST00000610535 SPINK6Q6UWN8 80 aa10.07□□□□□ -0.8
TNIP1-220ENST00000610535 PSORS1C2Q9UIG4 136 aa10.07□□□□□ -0.8
TNIP1-220ENST00000610535 A6NN06 94 aa10.05□□□□□ -0.8
TNIP1-220ENST00000610535 Q5W150 140 aa10.05□□□□□ -0.8
TNIP1-220ENST00000610535 PRR26Q8N8Z3 221 aa10.04□□□□□ -0.8
TNIP1-220ENST00000610535 DYNC2H1Q8NCM8 4307 aaKnown RBP10.03□□□□□ -0.8
TNIP1-220ENST00000610535 DNAH8Q96JB1 4490 aa10.03□□□□□ -0.8
TNIP1-220ENST00000610535 ZNF706Q9Y5V0 76 aaPredicted RBP10.03□□□□□ -0.8
TNIP1-220ENST00000610535 IGLV5-52A0A0A0MRZ9 124 aa10.01□□□□□ -0.81
TNIP1-220ENST00000610535 FBN3Q75N90 2809 aa10.01□□□□□ -0.81
TNIP1-220ENST00000610535 RBM12B-AS1Q9P1G2 102 aa10□□□□□ -0.81
TNIP1-220ENST00000610535 A0A087WTM6 91 aa9.98□□□□□ -0.81
TNIP1-220ENST00000610535 ZNF861PO60384 105 aa9.98□□□□□ -0.81
TNIP1-220ENST00000610535 NUPR2A6NF83 97 aa9.97□□□□□ -0.81
TNIP1-220ENST00000610535 HECTD4Q9Y4D8 3996 aa9.95□□□□□ -0.82
TNIP1-220ENST00000610535 RTL8CO15255 209 aa9.95□□□□□ -0.82
TNIP1-220ENST00000610535 KRTAP13-3Q3SY46 172 aa9.95□□□□□ -0.82
TNIP1-220ENST00000610535 DNAH2Q9P225 4427 aa9.94□□□□□ -0.82
TNIP1-220ENST00000610535 CIRBP-AS1Q8TBR5 109 aa9.93□□□□□ -0.82
TNIP1-220ENST00000610535 RETNLBQ9BQ08 111 aa9.91□□□□□ -0.82
TNIP1-220ENST00000610535 VPS13DQ5THJ4 4388 aa9.91□□□□□ -0.82
TNIP1-220ENST00000610535 C7orf65Q6ZTY9 151 aa9.89□□□□□ -0.83
TNIP1-220ENST00000610535 DNAH17Q9UFH2 4485 aa9.87□□□□□ -0.83
TNIP1-220ENST00000610535 ACYP2P14621 99 aa9.86□□□□□ -0.83
TNIP1-220ENST00000610535 LY6G6CO95867 125 aa9.85□□□□□ -0.83
TNIP1-220ENST00000610535 IGLV7-43P04211 117 aa9.83□□□□□ -0.84
TNIP1-220ENST00000610535 ALMS1Q8TCU4 4167 aa9.82□□□□□ -0.84
TNIP1-220ENST00000610535 DNAH6Q9C0G6 4158 aa9.8□□□□□ -0.84
TNIP1-220ENST00000610535 DMAC1Q96GE9 116 aa9.78□□□□□ -0.84
TNIP1-220ENST00000610535 LINC00313P59037 77 aa9.77□□□□□ -0.84
TNIP1-220ENST00000610535 C8orf87E5RJ46 101 aa9.76□□□□□ -0.85
TNIP1-220ENST00000610535 PRAC1Q96KF2 57 aa9.76□□□□□ -0.85
TNIP1-220ENST00000610535 SSBP3-AS1Q7Z2R9 100 aa9.74□□□□□ -0.85
TNIP1-220ENST00000610535 A0A1B0GU69 56 aa9.74□□□□□ -0.85
TNIP1-220ENST00000610535 FAM229AH3BQW9 127 aa9.72□□□□□ -0.85
TNIP1-220ENST00000610535 ADM2Q7Z4H4 148 aa9.72□□□□□ -0.85
TNIP1-220ENST00000610535 HYDINQ4G0P3 5121 aa9.71□□□□□ -0.86
TNIP1-220ENST00000610535 C1orf134Q5TEV5 83 aa9.7□□□□□ -0.86
TNIP1-220ENST00000610535 IGKV2-30P06310 120 aa9.7□□□□□ -0.86
TNIP1-220ENST00000610535 DNAH11Q96DT5 4516 aa9.68□□□□□ -0.86
TNIP1-220ENST00000610535 KRTAP13-2Q52LG2 175 aa9.66□□□□□ -0.86
TNIP1-220ENST00000610535 IGKV2D-30A0A075B6S6 120 aa9.65□□□□□ -0.86
TNIP1-220ENST00000610535 KRTAP10-2P60368 255 aa9.65□□□□□ -0.86
TNIP1-220ENST00000610535 KRTAP16-1A8MUX0 517 aa9.63□□□□□ -0.87
TNIP1-220ENST00000610535 SPATA8Q6RVD6 105 aa9.61□□□□□ -0.87
TNIP1-220ENST00000610535 DNAH5Q8TE73 4624 aa9.6□□□□□ -0.87
TNIP1-220ENST00000610535 MIR22HGQ0VDD5 57 aa9.59□□□□□ -0.87
TNIP1-220ENST00000610535 UQCR11O14957 56 aa9.56□□□□□ -0.88
TNIP1-220ENST00000610535 LRP1BQ9NZR2 4599 aa9.55□□□□□ -0.88
TNIP1-220ENST00000610535 PLA2G1BP04054 148 aaKnown RBP9.54□□□□□ -0.88
TNIP1-220ENST00000610535 SPINK1P00995 79 aa9.54□□□□□ -0.88
TNIP1-220ENST00000610535 PKHD1P08F94 4074 aa9.48□□□□□ -0.89
TNIP1-220ENST00000610535 PKD1P98161 4303 aa9.48□□□□□ -0.89
TNIP1-220ENST00000610535 KRTAP10-1P60331 282 aa9.48□□□□□ -0.89
TNIP1-220ENST00000610535 FAT2Q9NYQ8 4349 aa9.48□□□□□ -0.89
TNIP1-220ENST00000610535 KRTAP1-4P0C5Y4 121 aa9.47□□□□□ -0.89
TNIP1-220ENST00000610535 Q8N1X5 172 aa9.47□□□□□ -0.89
TNIP1-220ENST00000610535 LINC01554Q52M75 96 aa9.42□□□□□ -0.9
TNIP1-220ENST00000610535 C4orf48Q5BLP8 95 aa9.4□□□□□ -0.9
TNIP1-220ENST00000610535 VPS13BQ7Z7G8 4022 aa9.4□□□□□ -0.9
TNIP1-220ENST00000610535 Q6ZSA8 131 aa9.4□□□□□ -0.91
TNIP1-220ENST00000610535 CSAG1Q6PB30 78 aa9.39□□□□□ -0.91
TNIP1-220ENST00000610535 TYMSOSQ8TAI1 123 aa9.37□□□□□ -0.91
TNIP1-220ENST00000610535 SACSQ9NZJ4 4579 aa9.33□□□□□ -0.92
TNIP1-220ENST00000610535 SMR3BP02814 79 aaPredicted RBP9.3□□□□□ -0.92
TNIP1-220ENST00000610535 FAT1Q14517 4588 aa9.23□□□□□ -0.93
TNIP1-220ENST00000610535 H0YAA0 97 aa9.23□□□□□ -0.93
TNIP1-220ENST00000610535 KMT2CQ8NEZ4 4911 aaKnown RBP9.22□□□□□ -0.93
TNIP1-220ENST00000610535 LINC00304Q8N9R0 145 aa9.21□□□□□ -0.93
TNIP1-220ENST00000610535 C9orf92A6NGG3 77 aa9.21□□□□□ -0.94
TNIP1-220ENST00000610535 DYNC1H1Q14204 4646 aaKnown RBP9.19□□□□□ -0.94
TNIP1-220ENST00000610535 KRTAP3-1Q9BYR8 98 aa9.18□□□□□ -0.94
TNIP1-220ENST00000610535 A8MUU9 505 aa9.13□□□□□ -0.95
TNIP1-220ENST00000610535 FLG2Q5D862 2391 aaPredicted RBP9.13□□□□□ -0.95
TNIP1-220ENST00000610535 A0A1B0GU33 70 aa9.12□□□□□ -0.95
TNIP1-220ENST00000610535 KRTAP21-3Q3LHN1 58 aa9.11□□□□□ -0.95
TNIP1-220ENST00000610535 RPS29P62273 56 aaKnown RBP9.08□□□□□ -0.96
TNIP1-220ENST00000610535 C20orf166-AS1Q96NR2 134 aa9.08□□□□□ -0.96
TNIP1-220ENST00000610535 H1FX-AS1Q4G0G2 97 aa9.06□□□□□ -0.96
TNIP1-220ENST00000610535 CRIPTQ9P021 101 aa9.03□□□□□ -0.96
TNIP1-220ENST00000610535 RYR2Q92736 4967 aa9.03□□□□□ -0.96
TNIP1-220ENST00000610535 H3BS24 57 aa9.03□□□□□ -0.96
TNIP1-220ENST00000610535 APOBP04114 4563 aaKnown RBP9.02□□□□□ -0.97
TNIP1-220ENST00000610535 KRTAP25-1Q3LHN0 102 aa9.02□□□□□ -0.97
TNIP1-220ENST00000610535 A0A1B0GVY2 172 aa8.95□□□□□ -0.98
TNIP1-220ENST00000610535 COX6B2Q6YFQ2 88 aa8.93□□□□□ -0.98
TNIP1-220ENST00000610535 LRP1Q07954 4544 aaKnown RBP8.91□□□□□ -0.98
TNIP1-220ENST00000610535 RYR3Q15413 4870 aa8.9□□□□□ -0.98
TNIP1-220ENST00000610535 PKHD1L1Q86WI1 4243 aa8.9□□□□□ -0.99
TNIP1-220ENST00000610535 K7ERS5 55 aa8.86□□□□□ -0.99
TNIP1-220ENST00000610535 DMBT1Q9UGM3 2413 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms