RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 TACC2O95359 2948 aa6.19□□□□□ -1.42
SHANK2-219ENST00000606715 DNAH14Q0VDD8 3507 aa6.19□□□□□ -1.42
SHANK2-219ENST00000606715 LAMA1P25391 3075 aa6.19□□□□□ -1.42
SHANK2-219ENST00000606715 DMXL2Q8TDJ6 3036 aa6.17□□□□□ -1.42
SHANK2-219ENST00000606715 NOTCH2NLQ7Z3S9 236 aa6.16□□□□□ -1.42
SHANK2-219ENST00000606715 EYSQ5T1H1 3165 aa6.14□□□□□ -1.43
SHANK2-219ENST00000606715 COL6A3P12111 3177 aa6.14□□□□□ -1.43
SHANK2-219ENST00000606715 TNP1P09430 55 aa6.13□□□□□ -1.43
SHANK2-219ENST00000606715 LRBAP50851 2863 aa6.13□□□□□ -1.43
SHANK2-219ENST00000606715 A8MU10 97 aa6.13□□□□□ -1.43
SHANK2-219ENST00000606715 KRTAP25-1Q3LHN0 102 aa6.12□□□□□ -1.43
SHANK2-219ENST00000606715 BOD1L1Q8NFC6 3051 aa6.12□□□□□ -1.43
SHANK2-219ENST00000606715 REV3LO60673 3130 aa6.09□□□□□ -1.43
SHANK2-219ENST00000606715 NDUFAF8A1L188 74 aa6.09□□□□□ -1.43
SHANK2-219ENST00000606715 ADGRG4Q8IZF6 3080 aa6.09□□□□□ -1.43
SHANK2-219ENST00000606715 SPTBN5Q9NRC6 3674 aaKnown RBP6.08□□□□□ -1.44
SHANK2-219ENST00000606715 NBEAQ8NFP9 2946 aa6.08□□□□□ -1.44
SHANK2-219ENST00000606715 KALRNO60229 2985 aa6.07□□□□□ -1.44
SHANK2-219ENST00000606715 A0A1B0GVY2 172 aa6.07□□□□□ -1.44
SHANK2-219ENST00000606715 ZZEF1O43149 2961 aa6.07□□□□□ -1.44
SHANK2-219ENST00000606715 KRTAP10-8P60410 259 aa6.06□□□□□ -1.44
SHANK2-219ENST00000606715 FREM2Q5SZK8 3169 aa6.05□□□□□ -1.44
SHANK2-219ENST00000606715 A6NN06 94 aa6.02□□□□□ -1.45
SHANK2-219ENST00000606715 C10orf95Q9H7T3 257 aa6.01□□□□□ -1.45
SHANK2-219ENST00000606715 KRTAP10-10P60014 251 aa6.01□□□□□ -1.45
SHANK2-219ENST00000606715 KRTAP1-4P0C5Y4 121 aa6□□□□□ -1.45
SHANK2-219ENST00000606715 ZANQ9Y493 2812 aa5.98□□□□□ -1.45
SHANK2-219ENST00000606715 CRYBG3Q68DQ2 2970 aa5.97□□□□□ -1.45
SHANK2-219ENST00000606715 XP32Q5T750 250 aa5.96□□□□□ -1.46
SHANK2-219ENST00000606715 CELSR2Q9HCU4 2923 aa5.96□□□□□ -1.46
SHANK2-219ENST00000606715 PRO2289Q9P1D8 64 aa5.96□□□□□ -1.46
SHANK2-219ENST00000606715 USP34Q70CQ2 3546 aa5.94□□□□□ -1.46
SHANK2-219ENST00000606715 DMXL1Q9Y485 3027 aa5.94□□□□□ -1.46
SHANK2-219ENST00000606715 TPRXLQ17RH7 258 aa5.94□□□□□ -1.46
SHANK2-219ENST00000606715 DCHS2Q6V1P9 2916 aa5.94□□□□□ -1.46
SHANK2-219ENST00000606715 CFAP47Q6ZTR5 3102 aa5.94□□□□□ -1.46
SHANK2-219ENST00000606715 HRNRQ86YZ3 2850 aaPredicted RBP5.93□□□□□ -1.46
SHANK2-219ENST00000606715 ASH1LQ9NR48 2969 aaKnown RBP5.89□□□□□ -1.47
SHANK2-219ENST00000606715 SPEGQ15772 3267 aa5.88□□□□□ -1.47
SHANK2-219ENST00000606715 MYO15AQ9UKN7 3530 aa5.88□□□□□ -1.47
SHANK2-219ENST00000606715 NF1P21359 2839 aa5.87□□□□□ -1.47
SHANK2-219ENST00000606715 MXRA5Q9NR99 2828 aa5.84□□□□□ -1.48
SHANK2-219ENST00000606715 PP632Q6XCG6 107 aa5.81□□□□□ -1.48
SHANK2-219ENST00000606715 KRTAP13-3Q3SY46 172 aa5.77□□□□□ -1.49
SHANK2-219ENST00000606715 TENM1Q9UKZ4 2725 aa5.76□□□□□ -1.49
SHANK2-219ENST00000606715 LOC400499M0QZD8 3231 aa5.76□□□□□ -1.49
SHANK2-219ENST00000606715 TENM3Q9P273 2699 aa5.76□□□□□ -1.49
SHANK2-219ENST00000606715 TENM2Q9NT68 2774 aa5.75□□□□□ -1.49
SHANK2-219ENST00000606715 FBN2P35556 2912 aa5.74□□□□□ -1.49
SHANK2-219ENST00000606715 PDZD2O15018 2839 aa5.73□□□□□ -1.49
SHANK2-219ENST00000606715 P0C880 135 aa5.66□□□□□ -1.5
SHANK2-219ENST00000606715 WDFY3Q8IZQ1 3526 aa5.64□□□□□ -1.51
SHANK2-219ENST00000606715 CELSR1Q9NYQ6 3014 aa5.64□□□□□ -1.51
SHANK2-219ENST00000606715 MUC3AQ02505 3323 aa5.63□□□□□ -1.51
SHANK2-219ENST00000606715 RELNP78509 3460 aa5.59□□□□□ -1.51
SHANK2-219ENST00000606715 OTOGQ6ZRI0 2925 aa5.58□□□□□ -1.52
SHANK2-219ENST00000606715 H0YAA0 97 aa5.58□□□□□ -1.52
SHANK2-219ENST00000606715 DMDP11532 3685 aa5.57□□□□□ -1.52
SHANK2-219ENST00000606715 DCHS1Q96JQ0 3298 aa5.53□□□□□ -1.52
SHANK2-219ENST00000606715 PKD1L1Q8TDX9 2849 aa5.51□□□□□ -1.53
SHANK2-219ENST00000606715 ASPMQ8IZT6 3477 aa5.49□□□□□ -1.53
SHANK2-219ENST00000606715 TGP01266 2768 aa5.49□□□□□ -1.53
SHANK2-219ENST00000606715 ZFHX4Q86UP3 3567 aa5.48□□□□□ -1.53
SHANK2-219ENST00000606715 LAMA5O15230 3695 aa5.46□□□□□ -1.53
SHANK2-219ENST00000606715 ANK3Q12955 4377 aaKnown RBP5.45□□□□□ -1.54
SHANK2-219ENST00000606715 NBPF19A0A087WUL8 3843 aa5.44□□□□□ -1.54
SHANK2-219ENST00000606715 VWFP04275 2813 aa5.42□□□□□ -1.54
SHANK2-219ENST00000606715 FBN1P35555 2871 aaKnown RBP5.34□□□□□ -1.55
SHANK2-219ENST00000606715 SMG1Q96Q15 3661 aaKnown RBP5.33□□□□□ -1.56
SHANK2-219ENST00000606715 MT1HL1P0DM35 61 aa5.3□□□□□ -1.56
SHANK2-219ENST00000606715 ZFHX3Q15911 3703 aa5.3□□□□□ -1.56
SHANK2-219ENST00000606715 KRTAP12-2P59991 146 aa5.29□□□□□ -1.56
SHANK2-219ENST00000606715 CSMD1Q96PZ7 3565 aa5.29□□□□□ -1.56
SHANK2-219ENST00000606715 ALMS1Q8TCU4 4167 aa5.28□□□□□ -1.56
SHANK2-219ENST00000606715 KRTAP13-4Q3LI77 160 aa5.27□□□□□ -1.57
SHANK2-219ENST00000606715 KRTAP15-1Q3LI76 137 aa5.26□□□□□ -1.57
SHANK2-219ENST00000606715 KRTAP10-4P60372 401 aaPredicted RBP5.19□□□□□ -1.58
SHANK2-219ENST00000606715 FBN3Q75N90 2809 aa5.19□□□□□ -1.58
SHANK2-219ENST00000606715 KRTAP3-1Q9BYR8 98 aa5.19□□□□□ -1.58
SHANK2-219ENST00000606715 BSNQ9UPA5 3926 aa5.18□□□□□ -1.58
SHANK2-219ENST00000606715 SPENQ96T58 3664 aaKnown RBP5.17□□□□□ -1.58
SHANK2-219ENST00000606715 SVEP1Q4LDE5 3571 aa5.16□□□□□ -1.58
SHANK2-219ENST00000606715 CRCT1Q9UGL9 99 aa5.15□□□□□ -1.58
SHANK2-219ENST00000606715 CSMD2Q7Z408 3487 aa5.14□□□□□ -1.59
SHANK2-219ENST00000606715 KRTAP4-5Q9BYR2 181 aa5.14□□□□□ -1.59
SHANK2-219ENST00000606715 MEGF8Q7Z7M0 2845 aa5.13□□□□□ -1.59
SHANK2-219ENST00000606715 KRTAP12-1P59990 96 aa5.13□□□□□ -1.59
SHANK2-219ENST00000606715 SRRM2Q9UQ35 2752 aaKnown RBP5.1□□□□□ -1.59
SHANK2-219ENST00000606715 HUWE1Q7Z6Z7 4374 aaKnown RBP5.09□□□□□ -1.59
SHANK2-219ENST00000606715 TRRAPQ9Y4A5 3859 aa5.04□□□□□ -1.6
SHANK2-219ENST00000606715 KRTAP10-6P60371 365 aaPredicted RBP5.02□□□□□ -1.61
SHANK2-219ENST00000606715 KRTAP10-12P60413 245 aa5.01□□□□□ -1.61
SHANK2-219ENST00000606715 COL7A1Q02388 2944 aa4.96□□□□□ -1.61
SHANK2-219ENST00000606715 CUBNO60494 3623 aa4.96□□□□□ -1.62
SHANK2-219ENST00000606715 VPS13CQ709C8 3753 aa4.94□□□□□ -1.62
SHANK2-219ENST00000606715 DNAH9Q9NYC9 4486 aa4.91□□□□□ -1.62
SHANK2-219ENST00000606715 INE1O15225 51 aa4.9□□□□□ -1.62
SHANK2-219ENST00000606715 KRTAP3-3Q9BYR6 98 aa4.89□□□□□ -1.63
SHANK2-219ENST00000606715 DNAH1Q9P2D7 4330 aa4.86□□□□□ -1.63
SHANK2-219ENST00000606715 KRTAP3-2Q9BYR7 98 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms