RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 MAP1AP78559 2803 aaPredicted RBP0.87□□□□□ -2.27
SGMS1-207ENST00000602619 RIF1Q5UIP0 2472 aaKnown RBP0.87□□□□□ -2.27
SGMS1-207ENST00000602619 A0A0D9SG42 100 aa0.87□□□□□ -2.27
SGMS1-207ENST00000602619 LINC00959A0A1B0GUT2 108 aa0.87□□□□□ -2.27
SGMS1-207ENST00000602619 H3BUX3 64 aa0.87□□□□□ -2.27
SGMS1-207ENST00000602619 LINC00158P58513 81 aa0.87□□□□□ -2.27
SGMS1-207ENST00000602619 DEFB131AP59861 70 aa0.87□□□□□ -2.27
SGMS1-207ENST00000602619 DEFB114Q30KQ6 69 aa0.87□□□□□ -2.27
SGMS1-207ENST00000602619 WFDC9Q8NEX5 89 aa0.87□□□□□ -2.27
SGMS1-207ENST00000602619 NIPBLQ6KC79 2804 aaeCLIP0.87□□□□□ -2.27
SGMS1-207ENST00000602619 MXRA5Q9NR99 2828 aa0.87□□□□□ -2.27
SGMS1-207ENST00000602619 ACACAQ13085 2346 aa0.87□□□□□ -2.27
SGMS1-207ENST00000602619 SPTAN1Q13813 2472 aaKnown RBP0.87□□□□□ -2.27
SGMS1-207ENST00000602619 HRNRQ86YZ3 2850 aaPredicted RBP0.86□□□□□ -2.27
SGMS1-207ENST00000602619 DYNC2H1Q8NCM8 4307 aaKnown RBP0.86□□□□□ -2.27
SGMS1-207ENST00000602619 CMYA5Q8N3K9 4069 aa0.86□□□□□ -2.27
SGMS1-207ENST00000602619 KRTAP10-4P60372 401 aaPredicted RBP0.86□□□□□ -2.27
SGMS1-207ENST00000602619 ENHOQ6UWT2 76 aa0.86□□□□□ -2.27
SGMS1-207ENST00000602619 DEFB104AQ8WTQ1 72 aa0.86□□□□□ -2.27
SGMS1-207ENST00000602619 RELNP78509 3460 aa0.86□□□□□ -2.27
SGMS1-207ENST00000602619 USP9YO00507 2555 aaPredicted RBP0.86□□□□□ -2.27
SGMS1-207ENST00000602619 CFAP46Q8IYW2 2715 aa0.86□□□□□ -2.27
SGMS1-207ENST00000602619 DOPEY1Q5JWR5 2465 aa0.86□□□□□ -2.27
SGMS1-207ENST00000602619 ITPR1Q14643 2758 aa0.85□□□□□ -2.27
SGMS1-207ENST00000602619 SPTBN2O15020 2390 aa0.85□□□□□ -2.27
SGMS1-207ENST00000602619 MYO9AB2RTY4 2548 aa0.85□□□□□ -2.27
SGMS1-207ENST00000602619 CRYBG3Q68DQ2 2970 aa0.85□□□□□ -2.27
SGMS1-207ENST00000602619 LCE6AA0A183 80 aa0.85□□□□□ -2.27
SGMS1-207ENST00000602619 HTN1P15515 57 aa0.85□□□□□ -2.27
SGMS1-207ENST00000602619 COX7BP24311 80 aa0.85□□□□□ -2.27
SGMS1-207ENST00000602619 NAV2Q8IVL1 2488 aa0.85□□□□□ -2.27
SGMS1-207ENST00000602619 NOP10Q9NPE3 64 aaKnown RBP0.85□□□□□ -2.27
SGMS1-207ENST00000602619 TOMM7Q9P0U1 55 aa0.85□□□□□ -2.27
SGMS1-207ENST00000602619 PRO0255Q9UI72 69 aa0.85□□□□□ -2.27
SGMS1-207ENST00000602619 PTPRQQ9UMZ3 2332 aa0.85□□□□□ -2.27
SGMS1-207ENST00000602619 DNAH17Q9UFH2 4485 aa0.85□□□□□ -2.27
SGMS1-207ENST00000602619 ZFHX3Q15911 3703 aa0.85□□□□□ -2.27
SGMS1-207ENST00000602619 ZANQ9Y493 2812 aa0.85□□□□□ -2.27
SGMS1-207ENST00000602619 C2CD3Q4AC94 2353 aa0.85□□□□□ -2.27
SGMS1-207ENST00000602619 ANK2Q01484 3957 aa0.85□□□□□ -2.27
SGMS1-207ENST00000602619 COL6A6A6NMZ7 2263 aa0.85□□□□□ -2.27
SGMS1-207ENST00000602619 CACNA1AO00555 2505 aa0.84□□□□□ -2.27
SGMS1-207ENST00000602619 USP9XQ93008 2570 aaPredicted RBP0.84□□□□□ -2.27
SGMS1-207ENST00000602619 CRIPTQ9P021 101 aa0.84□□□□□ -2.27
SGMS1-207ENST00000602619 ACACBO00763 2458 aa0.84□□□□□ -2.28
SGMS1-207ENST00000602619 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.84□□□□□ -2.281e-8■■□□□ 14.2
SGMS1-207ENST00000602619 PCNX1Q96RV3 2341 aa0.84□□□□□ -2.28
SGMS1-207ENST00000602619 CENPEQ02224 2701 aa0.84□□□□□ -2.28
SGMS1-207ENST00000602619 NBASA2RRP1 2371 aa0.84□□□□□ -2.28
SGMS1-207ENST00000602619 UTP20O75691 2785 aaKnown RBP0.84□□□□□ -2.28
SGMS1-207ENST00000602619 SPG11Q96JI7 2443 aa0.84□□□□□ -2.28
SGMS1-207ENST00000602619 DOPEY2Q9Y3R5 2298 aa0.84□□□□□ -2.28
SGMS1-207ENST00000602619 NF1P21359 2839 aa0.83□□□□□ -2.28
SGMS1-207ENST00000602619 IGF2RP11717 2491 aa0.83□□□□□ -2.28
SGMS1-207ENST00000602619 HECTD4Q9Y4D8 3996 aa0.83□□□□□ -2.28
SGMS1-207ENST00000602619 FLNCQ14315 2725 aa0.83□□□□□ -2.28
SGMS1-207ENST00000602619 FBN2P35556 2912 aa0.83□□□□□ -2.28
SGMS1-207ENST00000602619 MYO18BQ8IUG5 2567 aa0.83□□□□□ -2.28
SGMS1-207ENST00000602619 IGLV5-48A0A075B6I7 105 aa0.83□□□□□ -2.28
SGMS1-207ENST00000602619 ETDCA0A1B0GVM5 59 aa0.83□□□□□ -2.28
SGMS1-207ENST00000602619 H3BNG1 76 aa0.83□□□□□ -2.28
SGMS1-207ENST00000602619 NREPQ16612 68 aa0.83□□□□□ -2.28
SGMS1-207ENST00000602619 DEFB136Q30KP8 78 aa0.83□□□□□ -2.28
SGMS1-207ENST00000602619 LELP1Q5T871 98 aa0.83□□□□□ -2.28
SGMS1-207ENST00000602619 KCNQ1DNQ9H478 68 aa0.83□□□□□ -2.28
SGMS1-207ENST00000602619 CHD6Q8TD26 2715 aa0.83□□□□□ -2.28
SGMS1-207ENST00000602619 AKAP6Q13023 2319 aa0.83□□□□□ -2.28
SGMS1-207ENST00000602619 AHNAK2Q8IVF2 5795 aa0.83□□□□□ -2.28
SGMS1-207ENST00000602619 VPS13DQ5THJ4 4388 aa0.83□□□□□ -2.28
SGMS1-207ENST00000602619 NBEAL2Q6ZNJ1 2754 aa0.83□□□□□ -2.28
SGMS1-207ENST00000602619 EPG5Q9HCE0 2579 aa0.83□□□□□ -2.28
SGMS1-207ENST00000602619 DNAH2Q9P225 4427 aa0.82□□□□□ -2.28
SGMS1-207ENST00000602619 LRRK2Q5S007 2527 aa0.82□□□□□ -2.28
SGMS1-207ENST00000602619 PIEZO1Q92508 2521 aa0.82□□□□□ -2.28
SGMS1-207ENST00000602619 CSPG4Q6UVK1 2322 aa0.82□□□□□ -2.28
SGMS1-207ENST00000602619 TRRAPQ9Y4A5 3859 aa0.82□□□□□ -2.28
SGMS1-207ENST00000602619 UBR5O95071 2799 aaPredicted RBP0.82□□□□□ -2.28
SGMS1-207ENST00000602619 SPART-AS1P0CW21 52 aa0.82□□□□□ -2.28
SGMS1-207ENST00000602619 DEFB130BP0DP73 79 aa0.82□□□□□ -2.28
SGMS1-207ENST00000602619 DEFB130AP0DP74 79 aa0.82□□□□□ -2.28
SGMS1-207ENST00000602619 C6orf48Q9UBA6 75 aa0.82□□□□□ -2.28
SGMS1-207ENST00000602619 DNAH11Q96DT5 4516 aa0.82□□□□□ -2.28
SGMS1-207ENST00000602619 ITPR3Q14573 2671 aa0.82□□□□□ -2.28
SGMS1-207ENST00000602619 PTPN13Q12923 2485 aa0.82□□□□□ -2.28
SGMS1-207ENST00000602619 NCOR2Q9Y618 2525 aa0.82□□□□□ -2.28
SGMS1-207ENST00000602619 DNAH7Q8WXX0 4024 aa0.82□□□□□ -2.28
SGMS1-207ENST00000602619 CHD8Q9HCK8 2581 aa0.82□□□□□ -2.28
SGMS1-207ENST00000602619 LYSTQ99698 3801 aa0.82□□□□□ -2.28
SGMS1-207ENST00000602619 HUWE1Q7Z6Z7 4374 aaKnown RBP0.82□□□□□ -2.28
SGMS1-207ENST00000602619 WNK1Q9H4A3 2382 aa0.82□□□□□ -2.28
SGMS1-207ENST00000602619 HIVEP3Q5T1R4 2406 aa0.81□□□□□ -2.28
SGMS1-207ENST00000602619 FAM208BQ5VWN6 2430 aa0.81□□□□□ -2.28
SGMS1-207ENST00000602619 DNAH10Q8IVF4 4471 aa0.81□□□□□ -2.28
SGMS1-207ENST00000602619 DNAH8Q96JB1 4490 aa0.81□□□□□ -2.28
SGMS1-207ENST00000602619 TEX15Q9BXT5 2789 aa0.81□□□□□ -2.28
SGMS1-207ENST00000602619 TLN2Q9Y4G6 2542 aa0.81□□□□□ -2.28
SGMS1-207ENST00000602619 POLQO75417 2590 aa0.81□□□□□ -2.28
SGMS1-207ENST00000602619 SETXQ7Z333 2677 aaKnown RBP0.81□□□□□ -2.28
SGMS1-207ENST00000602619 SPRR1AP35321 89 aa0.81□□□□□ -2.28
SGMS1-207ENST00000602619 PLECQ15149 4684 aaKnown RBP0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms