RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 AEBP2Q6ZN18 517 aaPredicted RBP20.97■□□□□ 0.95
SGMS1-207ENST00000602619 CHIC1Q5VXU3 224 aa19.56■□□□□ 0.72
SGMS1-207ENST00000602619 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
SGMS1-207ENST00000602619 PHF23Q9BUL5 403 aaPredicted RBP17.64■□□□□ 0.41
SGMS1-207ENST00000602619 FOXD1Q16676 465 aa16.75■□□□□ 0.27
SGMS1-207ENST00000602619 POTEDQ86YR6 584 aa15.95■□□□□ 0.14
SGMS1-207ENST00000602619 MSH5O43196 834 aa15.73■□□□□ 0.11
SGMS1-207ENST00000602619 PIAS4Q8N2W9 510 aaPredicted RBP15.53■□□□□ 0.08
SGMS1-207ENST00000602619 PLPPR3Q6T4P5 718 aa15.46■□□□□ 0.07
SGMS1-207ENST00000602619 PPP6R1Q9UPN7 881 aa15.45■□□□□ 0.06
SGMS1-207ENST00000602619 ADRA2BP18089 450 aa15.36■□□□□ 0.05
SGMS1-207ENST00000602619 MAPK8IP2Q13387 824 aaPredicted RBP14.23□□□□□ -0.13
SGMS1-207ENST00000602619 DMRT2Q9Y5R5 561 aa14.14□□□□□ -0.15
SGMS1-207ENST00000602619 SCAF1Q9H7N4 1312 aaKnown RBP13.98□□□□□ -0.17
SGMS1-207ENST00000602619 CACNB1Q02641 598 aaPredicted RBP13.72□□□□□ -0.21
SGMS1-207ENST00000602619 DCAF8L1A6NGE4 600 aa13.57□□□□□ -0.24
SGMS1-207ENST00000602619 PPP4R3CPQ6ZMV5 832 aa13.54□□□□□ -0.24
SGMS1-207ENST00000602619 HOXD11P31277 338 aaPredicted RBP13.5□□□□□ -0.25
SGMS1-207ENST00000602619 RNF39Q9H2S5 420 aa13.43□□□□□ -0.26
SGMS1-207ENST00000602619 CNKSR2Q8WXI2 1034 aa13.34□□□□□ -0.27
SGMS1-207ENST00000602619 RNF216Q9NWF9 866 aaPredicted RBP13.3□□□□□ -0.28
SGMS1-207ENST00000602619 C1QBPQ07021 282 aaKnown RBP13.2□□□□□ -0.3
SGMS1-207ENST00000602619 DNAJC5BQ9UF47 199 aa13.07□□□□□ -0.32
SGMS1-207ENST00000602619 NCBP3Q53F19 620 aaKnown RBP12.88□□□□□ -0.35
SGMS1-207ENST00000602619 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.85□□□□□ -0.35
SGMS1-207ENST00000602619 NPM3O75607 178 aaKnown RBP12.75□□□□□ -0.37
SGMS1-207ENST00000602619 U3KPZ7 1027 aaPredicted RBP12.56□□□□□ -0.4
SGMS1-207ENST00000602619 SPINK5Q9NQ38 1064 aaPredicted RBP12.5□□□□□ -0.41
SGMS1-207ENST00000602619 DSG3P32926 999 aa12.48□□□□□ -0.41
SGMS1-207ENST00000602619 CAPN15O75808 1086 aa12.45□□□□□ -0.42
SGMS1-207ENST00000602619 POTEHQ6S545 545 aa12.42□□□□□ -0.42
SGMS1-207ENST00000602619 SLC4A2P04920 1241 aa12.28□□□□□ -0.44
SGMS1-207ENST00000602619 KCNA4P22459 653 aa12.23□□□□□ -0.45
SGMS1-207ENST00000602619 TRHP20396 242 aaPredicted RBP12.19□□□□□ -0.46
SGMS1-207ENST00000602619 ABCB7O75027 752 aa12.16□□□□□ -0.46
SGMS1-207ENST00000602619 ZNF219Q9P2Y4 722 aaPredicted RBP12.11□□□□□ -0.47
SGMS1-207ENST00000602619 APLP2Q06481 763 aa12.09□□□□□ -0.47
SGMS1-207ENST00000602619 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.03□□□□□ -0.48
SGMS1-207ENST00000602619 HNRNPUL2Q1KMD3 747 aaKnown RBP12.03□□□□□ -0.48
SGMS1-207ENST00000602619 SAMD1Q6SPF0 538 aaPredicted RBP11.96□□□□□ -0.49
SGMS1-207ENST00000602619 RBM42Q9BTD8 480 aaKnown RBP11.85□□□□□ -0.51
SGMS1-207ENST00000602619 POLA2Q14181 598 aa11.81□□□□□ -0.52
SGMS1-207ENST00000602619 CHRDL2Q6WN34 429 aa11.76□□□□□ -0.53
SGMS1-207ENST00000602619 MYCNP04198 464 aaPredicted RBP11.75□□□□□ -0.53
SGMS1-207ENST00000602619 ATF5Q9Y2D1 282 aaPredicted RBP11.59□□□□□ -0.55
SGMS1-207ENST00000602619 AKT1S1Q96B36 256 aa11.54□□□□□ -0.56
SGMS1-207ENST00000602619 SP7Q8TDD2 431 aaPredicted RBP11.49□□□□□ -0.57
SGMS1-207ENST00000602619 REM2Q8IYK8 340 aaPredicted RBP11.46□□□□□ -0.57
SGMS1-207ENST00000602619 FOXD4L1Q9NU39 408 aa11.46□□□□□ -0.57
SGMS1-207ENST00000602619 ZBTB12Q9Y330 459 aaPredicted RBP11.46□□□□□ -0.57
SGMS1-207ENST00000602619 SLC4A1APQ9BWU0 796 aaKnown RBP11.44□□□□□ -0.58
SGMS1-207ENST00000602619 PIP4P2Q8N4L2 257 aa11.43□□□□□ -0.58
SGMS1-207ENST00000602619 OSCARQ8IYS5 282 aa11.41□□□□□ -0.58
SGMS1-207ENST00000602619 PITPNM1O00562 1244 aa11.34□□□□□ -0.59
SGMS1-207ENST00000602619 FXR2P51116 673 aaKnown RBP eCLIP11.31□□□□□ -0.6
SGMS1-207ENST00000602619 HAX1O00165 279 aa11.3□□□□□ -0.6
SGMS1-207ENST00000602619 ZBTB22O15209 634 aa11.26□□□□□ -0.61
SGMS1-207ENST00000602619 EVX2Q03828 476 aa11.2□□□□□ -0.62
SGMS1-207ENST00000602619 ATXN8OSP0DMR3 200 aa11.14□□□□□ -0.63
SGMS1-207ENST00000602619 SPDYE2BA6NHP3 402 aa11.11□□□□□ -0.63
SGMS1-207ENST00000602619 SPDYE6P0CI01 402 aa11.11□□□□□ -0.63
SGMS1-207ENST00000602619 SPDYE2Q495Y8 402 aa11.11□□□□□ -0.63
SGMS1-207ENST00000602619 FBLN2P98095 1184 aa11.07□□□□□ -0.64
SGMS1-207ENST00000602619 PRKAR2AP13861 404 aaKnown RBP11.04□□□□□ -0.64
SGMS1-207ENST00000602619 MKRN4PQ13434 485 aaPredicted RBP11.02□□□□□ -0.65
SGMS1-207ENST00000602619 CLEC11AQ9Y240 323 aa11.02□□□□□ -0.65
SGMS1-207ENST00000602619 SPDYE1Q8NFV5 336 aaPredicted RBP10.99□□□□□ -0.65
SGMS1-207ENST00000602619 ZNF692Q9BU19 519 aaPredicted RBP10.96□□□□□ -0.65
SGMS1-207ENST00000602619 C19orf67A6NJJ6 358 aa10.95□□□□□ -0.66
SGMS1-207ENST00000602619 SSUH2Q9Y2M2 353 aa10.94□□□□□ -0.66
SGMS1-207ENST00000602619 GABBR2O75899 941 aa10.89□□□□□ -0.67
SGMS1-207ENST00000602619 CHADLQ6NUI6 762 aa10.87□□□□□ -0.67
SGMS1-207ENST00000602619 PRR29P0C7W0 189 aa10.79□□□□□ -0.68
SGMS1-207ENST00000602619 LHX8Q68G74 356 aa10.78□□□□□ -0.68
SGMS1-207ENST00000602619 PABPN1Q86U42 306 aaKnown RBP eCLIP10.78□□□□□ -0.68
SGMS1-207ENST00000602619 POTEIP0CG38 1075 aa10.68□□□□□ -0.7
SGMS1-207ENST00000602619 FARP1Q9Y4F1 1045 aaPredicted RBP10.66□□□□□ -0.7
SGMS1-207ENST00000602619 CD44P16070 742 aaKnown RBP10.65□□□□□ -0.7
SGMS1-207ENST00000602619 CLCN6P51797 869 aa10.54□□□□□ -0.72
SGMS1-207ENST00000602619 DCBLD2Q96PD2 775 aa10.49□□□□□ -0.73
SGMS1-207ENST00000602619 ZNF579Q8NAF0 562 aaKnown RBP10.47□□□□□ -0.73
SGMS1-207ENST00000602619 CREBZFQ9NS37 354 aa10.47□□□□□ -0.73
SGMS1-207ENST00000602619 ZRANB1Q9UGI0 708 aa10.47□□□□□ -0.73
SGMS1-207ENST00000602619 CSRNP3Q8WYN3 585 aa10.45□□□□□ -0.74
SGMS1-207ENST00000602619 GALR2O43603 387 aaPredicted RBP10.4□□□□□ -0.74
SGMS1-207ENST00000602619 STAG3Q9UJ98 1225 aa10.38□□□□□ -0.75
SGMS1-207ENST00000602619 PLSCR2Q9NRY7 297 aa10.34□□□□□ -0.75
SGMS1-207ENST00000602619 POTEB2H3BUK9 544 aa10.33□□□□□ -0.76
SGMS1-207ENST00000602619 OTUD5Q96G74 571 aa10.33□□□□□ -0.76
SGMS1-207ENST00000602619 SPDYE4A6NLX3 237 aa10.3□□□□□ -0.76
SGMS1-207ENST00000602619 PHF12Q96QT6 1004 aa10.3□□□□□ -0.76
SGMS1-207ENST00000602619 MNX1P50219 401 aaPredicted RBP10.27□□□□□ -0.77
SGMS1-207ENST00000602619 PAK3O75914 559 aaPredicted RBP10.26□□□□□ -0.77
SGMS1-207ENST00000602619 PELP1Q8IZL8 1130 aaKnown RBP10.26□□□□□ -0.77
SGMS1-207ENST00000602619 NPM1P06748 294 aaKnown RBP eCLIP10.21□□□□□ -0.77
SGMS1-207ENST00000602619 POTEMA6NI47 508 aa10.16□□□□□ -0.78
SGMS1-207ENST00000602619 ASTLQ6HA08 431 aaPredicted RBP10.14□□□□□ -0.79
SGMS1-207ENST00000602619 MS4A3Q96HJ5 214 aa10.14□□□□□ -0.79
SGMS1-207ENST00000602619 ATMINO43313 823 aaPredicted RBP10.13□□□□□ -0.79
SGMS1-207ENST00000602619 POTEJP0CG39 1038 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms