RNA–Protein interactions for RNA: ENST00000599814.5

SYMPK-214, Transcript of symplekin, humanhuman

TSL 2 BASIC

Gene SYMPK, Length 6,537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-214ENST00000599814 MUC3AQ02505 3323 aa7.22□□□□□ -1.25
SYMPK-214ENST00000599814 FRYQ5TBA9 3013 aa7.21□□□□□ -1.26
SYMPK-214ENST00000599814 BOD1L1Q8NFC6 3051 aa7.2□□□□□ -1.26
SYMPK-214ENST00000599814 KRTAP11-1Q8IUC1 163 aa7.2□□□□□ -1.26
SYMPK-214ENST00000599814 KRTAP10-8P60410 259 aa7.19□□□□□ -1.26
SYMPK-214ENST00000599814 KRTAP13-2Q52LG2 175 aa7.16□□□□□ -1.26
SYMPK-214ENST00000599814 DMXL1Q9Y485 3027 aa7.14□□□□□ -1.27
SYMPK-214ENST00000599814 PP632Q6XCG6 107 aa7.12□□□□□ -1.27
SYMPK-214ENST00000599814 LOC400499M0QZD8 3231 aa7.11□□□□□ -1.27
SYMPK-214ENST00000599814 DMXL2Q8TDJ6 3036 aa7.11□□□□□ -1.27
SYMPK-214ENST00000599814 MAP1AP78559 2803 aaPredicted RBP7.1□□□□□ -1.27
SYMPK-214ENST00000599814 TENM4Q6N022 2769 aa7.1□□□□□ -1.27
SYMPK-214ENST00000599814 KRTAP7-1Q8IUC3 87 aa7.1□□□□□ -1.27
SYMPK-214ENST00000599814 DMDP11532 3685 aa7.09□□□□□ -1.28
SYMPK-214ENST00000599814 KRTAP13-1Q8IUC0 172 aa7.09□□□□□ -1.28
SYMPK-214ENST00000599814 KMT2BQ9UMN6 2715 aaPredicted RBP7.06□□□□□ -1.28
SYMPK-214ENST00000599814 NBEAQ8NFP9 2946 aa7.04□□□□□ -1.28
SYMPK-214ENST00000599814 ADGRG4Q8IZF6 3080 aa7.02□□□□□ -1.29
SYMPK-214ENST00000599814 WDFY3Q8IZQ1 3526 aa7.01□□□□□ -1.29
SYMPK-214ENST00000599814 UBR5O95071 2799 aaPredicted RBP7□□□□□ -1.29
SYMPK-214ENST00000599814 NSD1Q96L73 2696 aaPredicted RBP7□□□□□ -1.29
SYMPK-214ENST00000599814 PRO2289Q9P1D8 64 aa7□□□□□ -1.29
SYMPK-214ENST00000599814 HIVEP1P15822 2718 aa7□□□□□ -1.29
SYMPK-214ENST00000599814 FLNCQ14315 2725 aa6.99□□□□□ -1.29
SYMPK-214ENST00000599814 XP32Q5T750 250 aa6.98□□□□□ -1.29
SYMPK-214ENST00000599814 TPRXLQ17RH7 258 aa6.98□□□□□ -1.29
SYMPK-214ENST00000599814 COL12A1Q99715 3063 aa6.97□□□□□ -1.29
SYMPK-214ENST00000599814 ATMQ13315 3056 aa6.97□□□□□ -1.29
SYMPK-214ENST00000599814 TACC2O95359 2948 aa6.96□□□□□ -1.29
SYMPK-214ENST00000599814 P0C880 135 aa6.94□□□□□ -1.3
SYMPK-214ENST00000599814 ASPMQ8IZT6 3477 aa6.94□□□□□ -1.3
SYMPK-214ENST00000599814 CFAP47Q6ZTR5 3102 aa6.92□□□□□ -1.3
SYMPK-214ENST00000599814 LAMA5O15230 3695 aa6.92□□□□□ -1.3
SYMPK-214ENST00000599814 ZZEF1O43149 2961 aa6.91□□□□□ -1.3
SYMPK-214ENST00000599814 H0YAA0 97 aa6.9□□□□□ -1.31
SYMPK-214ENST00000599814 LRBAP50851 2863 aa6.87□□□□□ -1.31
SYMPK-214ENST00000599814 ITPR1Q14643 2758 aa6.86□□□□□ -1.31
SYMPK-214ENST00000599814 DCHS1Q96JQ0 3298 aa6.84□□□□□ -1.31
SYMPK-214ENST00000599814 KALRNO60229 2985 aa6.83□□□□□ -1.32
SYMPK-214ENST00000599814 NBEAL2Q6ZNJ1 2754 aa6.82□□□□□ -1.32
SYMPK-214ENST00000599814 UTP20O75691 2785 aaKnown RBP6.81□□□□□ -1.32
SYMPK-214ENST00000599814 RELNP78509 3460 aa6.78□□□□□ -1.32
SYMPK-214ENST00000599814 ZFHX4Q86UP3 3567 aa6.77□□□□□ -1.33
SYMPK-214ENST00000599814 KRTAP1-4P0C5Y4 121 aa6.74□□□□□ -1.33
SYMPK-214ENST00000599814 TENM2Q9NT68 2774 aa6.72□□□□□ -1.33
SYMPK-214ENST00000599814 KRTAP13-3Q3SY46 172 aa6.7□□□□□ -1.34
SYMPK-214ENST00000599814 APCP25054 2843 aa6.69□□□□□ -1.34
SYMPK-214ENST00000599814 ASH1LQ9NR48 2969 aaKnown RBP6.61□□□□□ -1.35
SYMPK-214ENST00000599814 HRNRQ86YZ3 2850 aaPredicted RBP6.6□□□□□ -1.35
SYMPK-214ENST00000599814 DCHS2Q6V1P9 2916 aa6.59□□□□□ -1.35
SYMPK-214ENST00000599814 ZANQ9Y493 2812 aa6.59□□□□□ -1.36
SYMPK-214ENST00000599814 TENM1Q9UKZ4 2725 aa6.58□□□□□ -1.36
SYMPK-214ENST00000599814 SMG1Q96Q15 3661 aaKnown RBP6.57□□□□□ -1.36
SYMPK-214ENST00000599814 CELSR2Q9HCU4 2923 aa6.54□□□□□ -1.36
SYMPK-214ENST00000599814 NIPBLQ6KC79 2804 aaeCLIP6.5□□□□□ -1.376e-7■■■□□ 15
SYMPK-214ENST00000599814 NBPF19A0A087WUL8 3843 aa6.49□□□□□ -1.37
SYMPK-214ENST00000599814 KRTAP12-2P59991 146 aa6.48□□□□□ -1.37
SYMPK-214ENST00000599814 KRTAP13-4Q3LI77 160 aa6.44□□□□□ -1.38
SYMPK-214ENST00000599814 TENM3Q9P273 2699 aa6.42□□□□□ -1.38
SYMPK-214ENST00000599814 NF1P21359 2839 aa6.42□□□□□ -1.38
SYMPK-214ENST00000599814 CSMD1Q96PZ7 3565 aa6.42□□□□□ -1.38
SYMPK-214ENST00000599814 SPENQ96T58 3664 aaKnown RBP6.42□□□□□ -1.38
SYMPK-214ENST00000599814 SVEP1Q4LDE5 3571 aa6.41□□□□□ -1.38
SYMPK-214ENST00000599814 FBN2P35556 2912 aa6.39□□□□□ -1.39
SYMPK-214ENST00000599814 BSNQ9UPA5 3926 aa6.39□□□□□ -1.39
SYMPK-214ENST00000599814 CELSR1Q9NYQ6 3014 aa6.39□□□□□ -1.39
SYMPK-214ENST00000599814 KRTAP4-5Q9BYR2 181 aa6.35□□□□□ -1.39
SYMPK-214ENST00000599814 PKD1L1Q8TDX9 2849 aa6.35□□□□□ -1.39
SYMPK-214ENST00000599814 MXRA5Q9NR99 2828 aa6.34□□□□□ -1.39
SYMPK-214ENST00000599814 KRTAP12-1P59990 96 aa6.31□□□□□ -1.4
SYMPK-214ENST00000599814 ZFHX3Q15911 3703 aa6.3□□□□□ -1.4
SYMPK-214ENST00000599814 CRCT1Q9UGL9 99 aa6.28□□□□□ -1.4
SYMPK-214ENST00000599814 KRTAP15-1Q3LI76 137 aa6.26□□□□□ -1.41
SYMPK-214ENST00000599814 CSMD2Q7Z408 3487 aa6.25□□□□□ -1.41
SYMPK-214ENST00000599814 VWFP04275 2813 aa6.2□□□□□ -1.42
SYMPK-214ENST00000599814 INE1O15225 51 aa6.19□□□□□ -1.42
SYMPK-214ENST00000599814 CUBNO60494 3623 aa6.19□□□□□ -1.42
SYMPK-214ENST00000599814 LORP23490 312 aaPredicted RBP6.17□□□□□ -1.42
SYMPK-214ENST00000599814 PDZD2O15018 2839 aa6.11□□□□□ -1.43
SYMPK-214ENST00000599814 VPS13CQ709C8 3753 aa6.09□□□□□ -1.44
SYMPK-214ENST00000599814 OTOGQ6ZRI0 2925 aa6.08□□□□□ -1.44
SYMPK-214ENST00000599814 MT1HL1P0DM35 61 aa6.07□□□□□ -1.44
SYMPK-214ENST00000599814 KRTAP3-1Q9BYR8 98 aa6.07□□□□□ -1.44
SYMPK-214ENST00000599814 FBN3Q75N90 2809 aa6.05□□□□□ -1.44
SYMPK-214ENST00000599814 FBN1P35555 2871 aaKnown RBP5.97□□□□□ -1.45
SYMPK-214ENST00000599814 KRTAP10-6P60371 365 aaPredicted RBP5.96□□□□□ -1.46
SYMPK-214ENST00000599814 ANK3Q12955 4377 aaKnown RBP5.93□□□□□ -1.46
SYMPK-214ENST00000599814 TGP01266 2768 aa5.91□□□□□ -1.46
SYMPK-214ENST00000599814 ZNF469Q96JG9 3925 aaPredicted RBP5.9□□□□□ -1.47
SYMPK-214ENST00000599814 KRTAP10-12P60413 245 aa5.89□□□□□ -1.47
SYMPK-214ENST00000599814 KRTAP8-1Q8IUC2 63 aa5.84□□□□□ -1.47
SYMPK-214ENST00000599814 TRRAPQ9Y4A5 3859 aa5.83□□□□□ -1.48
SYMPK-214ENST00000599814 ALMS1Q8TCU4 4167 aa5.81□□□□□ -1.48
SYMPK-214ENST00000599814 SRRM2Q9UQ35 2752 aaKnown RBP5.8□□□□□ -1.48
SYMPK-214ENST00000599814 KRTAP3-2Q9BYR7 98 aa5.7□□□□□ -1.5
SYMPK-214ENST00000599814 KRTAP23-1A1A580 65 aa5.68□□□□□ -1.5
SYMPK-214ENST00000599814 AKAP9Q99996 3911 aa5.67□□□□□ -1.5
SYMPK-214ENST00000599814 KRTAP12-3P60328 96 aa5.66□□□□□ -1.5
SYMPK-214ENST00000599814 KRTAP3-3Q9BYR6 98 aa5.66□□□□□ -1.5
SYMPK-214ENST00000599814 COL7A1Q02388 2944 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 1377 ms