RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 CDK2AP2O75956 126 aa9.3□□□□□ -0.92
IRF3-219ENST00000597636 UBE2DNLQ8IWF7 75 aa9.3□□□□□ -0.92
IRF3-219ENST00000597636 LINC00483Q53H64 154 aa9.29□□□□□ -0.92
IRF3-219ENST00000597636 A0A087X002 238 aa9.28□□□□□ -0.92
IRF3-219ENST00000597636 NOTCH2NLQ7Z3S9 236 aa9.28□□□□□ -0.92
IRF3-219ENST00000597636 KMT2AQ03164 3969 aa9.26□□□□□ -0.93
IRF3-219ENST00000597636 PRR26Q8N8Z3 221 aa9.26□□□□□ -0.93
IRF3-219ENST00000597636 APLNQ9ULZ1 77 aa9.26□□□□□ -0.93
IRF3-219ENST00000597636 WWC2-AS2Q96NR7 200 aa9.24□□□□□ -0.93
IRF3-219ENST00000597636 Q5W150 140 aa9.22□□□□□ -0.93
IRF3-219ENST00000597636 ZNF706Q9Y5V0 76 aaPredicted RBP9.21□□□□□ -0.93
IRF3-219ENST00000597636 KRTAP13-3Q3SY46 172 aa9.2□□□□□ -0.94
IRF3-219ENST00000597636 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.2□□□□□ -0.94
IRF3-219ENST00000597636 SPACA4Q8TDM5 124 aa9.19□□□□□ -0.94
IRF3-219ENST00000597636 ACYP2P14621 99 aa9.18□□□□□ -0.94
IRF3-219ENST00000597636 ANAPC11Q9NYG5 84 aa9.18□□□□□ -0.94
IRF3-219ENST00000597636 NUPR2A6NF83 97 aa9.16□□□□□ -0.94
IRF3-219ENST00000597636 Q6ZRN7 208 aaPredicted RBP9.14□□□□□ -0.95
IRF3-219ENST00000597636 NBDYA0A0U1RRE5 68 aa9.14□□□□□ -0.95
IRF3-219ENST00000597636 SPINK6Q6UWN8 80 aa9.13□□□□□ -0.95
IRF3-219ENST00000597636 PSORS1C2Q9UIG4 136 aa9.13□□□□□ -0.95
IRF3-219ENST00000597636 DYNC2H1Q8NCM8 4307 aaKnown RBP9.12□□□□□ -0.95
IRF3-219ENST00000597636 LINC00313P59037 77 aa9.12□□□□□ -0.95
IRF3-219ENST00000597636 KRTAP21-3Q3LHN1 58 aa9.11□□□□□ -0.95
IRF3-219ENST00000597636 IGLV5-52A0A0A0MRZ9 124 aa9.11□□□□□ -0.95
IRF3-219ENST00000597636 LY6G6CO95867 125 aa9.1□□□□□ -0.95
IRF3-219ENST00000597636 DMAC1Q96GE9 116 aa9.1□□□□□ -0.95
IRF3-219ENST00000597636 ZNF861PO60384 105 aa9.1□□□□□ -0.95
IRF3-219ENST00000597636 ALMS1Q8TCU4 4167 aa9.09□□□□□ -0.95
IRF3-219ENST00000597636 VPS13DQ5THJ4 4388 aa9.07□□□□□ -0.96
IRF3-219ENST00000597636 PRAC1Q96KF2 57 aa9.06□□□□□ -0.96
IRF3-219ENST00000597636 HYDINQ4G0P3 5121 aa9.05□□□□□ -0.96
IRF3-219ENST00000597636 A0A1B0GU69 56 aa9.05□□□□□ -0.96
IRF3-219ENST00000597636 C8orf87E5RJ46 101 aa9.04□□□□□ -0.96
IRF3-219ENST00000597636 PLA2G1BP04054 148 aaKnown RBP9.04□□□□□ -0.96
IRF3-219ENST00000597636 DNAH8Q96JB1 4490 aa9.03□□□□□ -0.96
IRF3-219ENST00000597636 DNAH2Q9P225 4427 aa9.03□□□□□ -0.96
IRF3-219ENST00000597636 SPATA8Q6RVD6 105 aa9.02□□□□□ -0.96
IRF3-219ENST00000597636 CIRBP-AS1Q8TBR5 109 aa9.02□□□□□ -0.97
IRF3-219ENST00000597636 A0A087WTM6 91 aa9.01□□□□□ -0.97
IRF3-219ENST00000597636 ADM2Q7Z4H4 148 aa9.01□□□□□ -0.97
IRF3-219ENST00000597636 FRAS1Q86XX4 4008 aa9□□□□□ -0.97
IRF3-219ENST00000597636 FAM229AH3BQW9 127 aa8.99□□□□□ -0.97
IRF3-219ENST00000597636 RTL8CO15255 209 aa8.98□□□□□ -0.97
IRF3-219ENST00000597636 IGKV2-30P06310 120 aa8.97□□□□□ -0.97
IRF3-219ENST00000597636 RETNLBQ9BQ08 111 aa8.96□□□□□ -0.98
IRF3-219ENST00000597636 MIR22HGQ0VDD5 57 aa8.94□□□□□ -0.98
IRF3-219ENST00000597636 UQCR11O14957 56 aa8.94□□□□□ -0.98
IRF3-219ENST00000597636 SSBP3-AS1Q7Z2R9 100 aa8.94□□□□□ -0.98
IRF3-219ENST00000597636 IGLV7-43P04211 117 aa8.93□□□□□ -0.98
IRF3-219ENST00000597636 HECTD4Q9Y4D8 3996 aa8.92□□□□□ -0.98
IRF3-219ENST00000597636 LINC01554Q52M75 96 aa8.9□□□□□ -0.98
IRF3-219ENST00000597636 DNAH6Q9C0G6 4158 aa8.89□□□□□ -0.99
IRF3-219ENST00000597636 C1orf134Q5TEV5 83 aa8.88□□□□□ -0.99
IRF3-219ENST00000597636 KRTAP16-1A8MUX0 517 aa8.83□□□□□ -1
IRF3-219ENST00000597636 DNAH17Q9UFH2 4485 aa8.83□□□□□ -1
IRF3-219ENST00000597636 IGKV2D-30A0A075B6S6 120 aa8.81□□□□□ -1
IRF3-219ENST00000597636 KMT2CQ8NEZ4 4911 aaKnown RBP8.81□□□□□ -1
IRF3-219ENST00000597636 KRTAP10-2P60368 255 aa8.79□□□□□ -1
IRF3-219ENST00000597636 DNAH11Q96DT5 4516 aa8.78□□□□□ -1
IRF3-219ENST00000597636 SACSQ9NZJ4 4579 aa8.78□□□□□ -1
IRF3-219ENST00000597636 KRTAP13-2Q52LG2 175 aa8.76□□□□□ -1.01
IRF3-219ENST00000597636 CSAG1Q6PB30 78 aa8.75□□□□□ -1.01
IRF3-219ENST00000597636 C4orf48Q5BLP8 95 aa8.74□□□□□ -1.01
IRF3-219ENST00000597636 PKHD1P08F94 4074 aa8.74□□□□□ -1.01
IRF3-219ENST00000597636 DNAH5Q8TE73 4624 aa8.72□□□□□ -1.01
IRF3-219ENST00000597636 FAT2Q9NYQ8 4349 aa8.71□□□□□ -1.01
IRF3-219ENST00000597636 SPINK1P00995 79 aa8.68□□□□□ -1.02
IRF3-219ENST00000597636 PKD1P98161 4303 aa8.66□□□□□ -1.02
IRF3-219ENST00000597636 Q8N1X5 172 aa8.63□□□□□ -1.03
IRF3-219ENST00000597636 KRTAP10-1P60331 282 aa8.62□□□□□ -1.03
IRF3-219ENST00000597636 LRP1BQ9NZR2 4599 aa8.6□□□□□ -1.03
IRF3-219ENST00000597636 KRTAP1-4P0C5Y4 121 aa8.59□□□□□ -1.04
IRF3-219ENST00000597636 Q6ZSA8 131 aa8.58□□□□□ -1.04
IRF3-219ENST00000597636 RYR2Q92736 4967 aa8.57□□□□□ -1.04
IRF3-219ENST00000597636 H0YAA0 97 aa8.56□□□□□ -1.04
IRF3-219ENST00000597636 A8MUU9 505 aa8.55□□□□□ -1.04
IRF3-219ENST00000597636 H3BS24 57 aa8.55□□□□□ -1.04
IRF3-219ENST00000597636 RYR3Q15413 4870 aa8.55□□□□□ -1.04
IRF3-219ENST00000597636 VPS13BQ7Z7G8 4022 aa8.51□□□□□ -1.05
IRF3-219ENST00000597636 SMR3BP02814 79 aaPredicted RBP8.51□□□□□ -1.05
IRF3-219ENST00000597636 TYMSOSQ8TAI1 123 aa8.5□□□□□ -1.05
IRF3-219ENST00000597636 LINC00304Q8N9R0 145 aa8.49□□□□□ -1.05
IRF3-219ENST00000597636 KRTAP25-1Q3LHN0 102 aa8.48□□□□□ -1.05
IRF3-219ENST00000597636 DYNC1H1Q14204 4646 aaKnown RBP8.47□□□□□ -1.05
IRF3-219ENST00000597636 A0A1B0GU33 70 aa8.47□□□□□ -1.05
IRF3-219ENST00000597636 FAT1Q14517 4588 aa8.46□□□□□ -1.05
IRF3-219ENST00000597636 H1FX-AS1Q4G0G2 97 aa8.42□□□□□ -1.06
IRF3-219ENST00000597636 KRTAP3-1Q9BYR8 98 aa8.4□□□□□ -1.06
IRF3-219ENST00000597636 A0A1B0GVY2 172 aa8.36□□□□□ -1.07
IRF3-219ENST00000597636 RPS29P62273 56 aaKnown RBP8.36□□□□□ -1.07
IRF3-219ENST00000597636 ROMO1P60602 79 aa8.35□□□□□ -1.07
IRF3-219ENST00000597636 C20orf166-AS1Q96NR2 134 aa8.33□□□□□ -1.08
IRF3-219ENST00000597636 APOBP04114 4563 aaKnown RBP8.32□□□□□ -1.08
IRF3-219ENST00000597636 C9orf92A6NGG3 77 aa8.3□□□□□ -1.08
IRF3-219ENST00000597636 FLG2Q5D862 2391 aaPredicted RBP8.29□□□□□ -1.08
IRF3-219ENST00000597636 EPPK1P58107 5090 aaKnown RBP8.29□□□□□ -1.08
IRF3-219ENST00000597636 K7ERS5 55 aa8.28□□□□□ -1.08
IRF3-219ENST00000597636 KIAA1109Q2LD37 5005 aa8.26□□□□□ -1.09
IRF3-219ENST00000597636 COX6B2Q6YFQ2 88 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms