RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 Q6ZRN7 208 aaPredicted RBP10.13□□□□□ -0.79
SMARCA4-215ENST00000590574 NOTCH2NLQ7Z3S9 236 aa10.13□□□□□ -0.79
SMARCA4-215ENST00000590574 KRTAP10-2P60368 255 aa10.09□□□□□ -0.79
SMARCA4-215ENST00000590574 KRTAP13-1Q8IUC0 172 aa10.08□□□□□ -0.8
SMARCA4-215ENST00000590574 RBM12B-AS1Q9P1G2 102 aa10.05□□□□□ -0.8
SMARCA4-215ENST00000590574 KRTAP10-1P60331 282 aa10.03□□□□□ -0.8
SMARCA4-215ENST00000590574 DMAC1Q96GE9 116 aa10.01□□□□□ -0.81
SMARCA4-215ENST00000590574 CUBNO60494 3623 aa9.97□□□□□ -0.81
SMARCA4-215ENST00000590574 CSMD2Q7Z408 3487 aa9.96□□□□□ -0.81
SMARCA4-215ENST00000590574 PRAC1Q96KF2 57 aa9.94□□□□□ -0.82
SMARCA4-215ENST00000590574 NBPF19A0A087WUL8 3843 aa9.93□□□□□ -0.82
SMARCA4-215ENST00000590574 PDZD2O15018 2839 aa9.93□□□□□ -0.82
SMARCA4-215ENST00000590574 A8MU10 97 aa9.89□□□□□ -0.83
SMARCA4-215ENST00000590574 A0A1B0GU33 70 aa9.89□□□□□ -0.83
SMARCA4-215ENST00000590574 TENM4Q6N022 2769 aa9.86□□□□□ -0.83
SMARCA4-215ENST00000590574 STAB2Q8WWQ8 2551 aa9.86□□□□□ -0.83
SMARCA4-215ENST00000590574 ASB16-AS1Q495Z4 193 aa9.86□□□□□ -0.83
SMARCA4-215ENST00000590574 A0A0D9SG42 100 aa9.85□□□□□ -0.83
SMARCA4-215ENST00000590574 TENM3Q9P273 2699 aa9.84□□□□□ -0.83
SMARCA4-215ENST00000590574 ANK3Q12955 4377 aaKnown RBP9.84□□□□□ -0.83
SMARCA4-215ENST00000590574 VPS13CQ709C8 3753 aa9.83□□□□□ -0.84
SMARCA4-215ENST00000590574 TENM1Q9UKZ4 2725 aa9.81□□□□□ -0.84
SMARCA4-215ENST00000590574 SPINT4Q6UDR6 99 aa9.81□□□□□ -0.84
SMARCA4-215ENST00000590574 KRTAP13-2Q52LG2 175 aa9.8□□□□□ -0.84
SMARCA4-215ENST00000590574 ZFHX3Q15911 3703 aa9.79□□□□□ -0.84
SMARCA4-215ENST00000590574 VWFP04275 2813 aa9.78□□□□□ -0.84
SMARCA4-215ENST00000590574 A6NN06 94 aa9.76□□□□□ -0.85
SMARCA4-215ENST00000590574 LINC01554Q52M75 96 aa9.74□□□□□ -0.85
SMARCA4-215ENST00000590574 CSAG1Q6PB30 78 aa9.72□□□□□ -0.85
SMARCA4-215ENST00000590574 CRIPTQ9P021 101 aa9.7□□□□□ -0.86
SMARCA4-215ENST00000590574 SPATA8Q6RVD6 105 aa9.69□□□□□ -0.86
SMARCA4-215ENST00000590574 OTOGQ6ZRI0 2925 aa9.63□□□□□ -0.87
SMARCA4-215ENST00000590574 H1FX-AS1Q4G0G2 97 aa9.6□□□□□ -0.87
SMARCA4-215ENST00000590574 S4R3F8 94 aa9.6□□□□□ -0.87
SMARCA4-215ENST00000590574 RPS29P62273 56 aaKnown RBP9.56□□□□□ -0.88
SMARCA4-215ENST00000590574 Q6ZSA8 131 aa9.55□□□□□ -0.88
SMARCA4-215ENST00000590574 J3QL48 77 aa9.55□□□□□ -0.88
SMARCA4-215ENST00000590574 COX6B2Q6YFQ2 88 aa9.53□□□□□ -0.88
SMARCA4-215ENST00000590574 TRRAPQ9Y4A5 3859 aa9.53□□□□□ -0.88
SMARCA4-215ENST00000590574 ADM2Q7Z4H4 148 aa9.51□□□□□ -0.89
SMARCA4-215ENST00000590574 Q5VSD8 79 aa9.5□□□□□ -0.89
SMARCA4-215ENST00000590574 KRTAP1-4P0C5Y4 121 aa9.47□□□□□ -0.89
SMARCA4-215ENST00000590574 FBN1P35555 2871 aaKnown RBP9.46□□□□□ -0.89
SMARCA4-215ENST00000590574 PKD1L1Q8TDX9 2849 aa9.46□□□□□ -0.9
SMARCA4-215ENST00000590574 AKAP9Q99996 3911 aa9.44□□□□□ -0.9
SMARCA4-215ENST00000590574 RPL37P61927 97 aaKnown RBP9.44□□□□□ -0.9
SMARCA4-215ENST00000590574 ZNF469Q96JG9 3925 aaPredicted RBP9.43□□□□□ -0.9
SMARCA4-215ENST00000590574 DMBT1Q9UGM3 2413 aaPredicted RBP9.4□□□□□ -0.9
SMARCA4-215ENST00000590574 ROMO1P60602 79 aa9.39□□□□□ -0.91
SMARCA4-215ENST00000590574 KRTAP16-1A8MUX0 517 aa9.38□□□□□ -0.91
SMARCA4-215ENST00000590574 A8MUU9 505 aa9.33□□□□□ -0.92
SMARCA4-215ENST00000590574 KRTAP13-3Q3SY46 172 aa9.33□□□□□ -0.92
SMARCA4-215ENST00000590574 C20orf166-AS1Q96NR2 134 aa9.32□□□□□ -0.92
SMARCA4-215ENST00000590574 H3BS24 57 aa9.27□□□□□ -0.93
SMARCA4-215ENST00000590574 KRTAP25-1Q3LHN0 102 aa9.25□□□□□ -0.93
SMARCA4-215ENST00000590574 R4GN34 69 aa9.21□□□□□ -0.94
SMARCA4-215ENST00000590574 TGP01266 2768 aa9.19□□□□□ -0.94
SMARCA4-215ENST00000590574 CAMK2N1Q7Z7J9 78 aa9.16□□□□□ -0.94
SMARCA4-215ENST00000590574 M0QZ58 72 aa9.15□□□□□ -0.94
SMARCA4-215ENST00000590574 HUWE1Q7Z6Z7 4374 aaKnown RBP9.15□□□□□ -0.95
SMARCA4-215ENST00000590574 H0YAA0 97 aa9.13□□□□□ -0.95
SMARCA4-215ENST00000590574 SEC61BP60468 96 aaKnown RBP9.12□□□□□ -0.95
SMARCA4-215ENST00000590574 TENM2Q9NT68 2774 aa9.11□□□□□ -0.95
SMARCA4-215ENST00000590574 SRRM2Q9UQ35 2752 aaKnown RBP9.08□□□□□ -0.96
SMARCA4-215ENST00000590574 FLG2Q5D862 2391 aaPredicted RBP9.02□□□□□ -0.97
SMARCA4-215ENST00000590574 KRTAP21-3Q3LHN1 58 aa9.01□□□□□ -0.97
SMARCA4-215ENST00000590574 XP32Q5T750 250 aa8.98□□□□□ -0.97
SMARCA4-215ENST00000590574 LUZP6Q538Z0 58 aa8.96□□□□□ -0.97
SMARCA4-215ENST00000590574 FBN3Q75N90 2809 aa8.9□□□□□ -0.99
SMARCA4-215ENST00000590574 CSMD3Q7Z407 3707 aa8.87□□□□□ -0.99
SMARCA4-215ENST00000590574 M0R2T5 61 aa8.85□□□□□ -0.99
SMARCA4-215ENST00000590574 MEGF8Q7Z7M0 2845 aa8.85□□□□□ -0.99
SMARCA4-215ENST00000590574 A0A1B0GVY2 172 aa8.84□□□□□ -0.99
SMARCA4-215ENST00000590574 C10orf95Q9H7T3 257 aa8.8□□□□□ -1
SMARCA4-215ENST00000590574 KRTAP3-1Q9BYR8 98 aa8.78□□□□□ -1
SMARCA4-215ENST00000590574 P0C880 135 aa8.75□□□□□ -1.01
SMARCA4-215ENST00000590574 DNAH9Q9NYC9 4486 aa8.74□□□□□ -1.01
SMARCA4-215ENST00000590574 KRTAP10-8P60410 259 aa8.71□□□□□ -1.02
SMARCA4-215ENST00000590574 DNAH10Q8IVF4 4471 aa8.71□□□□□ -1.02
SMARCA4-215ENST00000590574 NDUFAF8A1L188 74 aa8.68□□□□□ -1.02
SMARCA4-215ENST00000590574 TPRXLQ17RH7 258 aa8.65□□□□□ -1.03
SMARCA4-215ENST00000590574 PLECQ15149 4684 aaKnown RBP8.61□□□□□ -1.03
SMARCA4-215ENST00000590574 DNAH1Q9P2D7 4330 aa8.6□□□□□ -1.03
SMARCA4-215ENST00000590574 COL7A1Q02388 2944 aa8.6□□□□□ -1.03
SMARCA4-215ENST00000590574 A0A0A0MQY5 61 aa8.56□□□□□ -1.04
SMARCA4-215ENST00000590574 PLAC4Q8WY50 150 aa8.56□□□□□ -1.04
SMARCA4-215ENST00000590574 KRTAP12-2P59991 146 aa8.52□□□□□ -1.05
SMARCA4-215ENST00000590574 KRTAP13-4Q3LI77 160 aa8.45□□□□□ -1.06
SMARCA4-215ENST00000590574 KRTAP10-6P60371 365 aaPredicted RBP8.44□□□□□ -1.06
SMARCA4-215ENST00000590574 VPS13DQ5THJ4 4388 aa8.43□□□□□ -1.06
SMARCA4-215ENST00000590574 DNAH3Q8TD57 4116 aa8.4□□□□□ -1.06
SMARCA4-215ENST00000590574 DNAH17Q9UFH2 4485 aa8.39□□□□□ -1.07
SMARCA4-215ENST00000590574 TNP1P09430 55 aa8.39□□□□□ -1.07
SMARCA4-215ENST00000590574 ANK2Q01484 3957 aa8.38□□□□□ -1.07
SMARCA4-215ENST00000590574 ALMS1Q8TCU4 4167 aa8.38□□□□□ -1.07
SMARCA4-215ENST00000590574 KRTAP12-1P59990 96 aa8.38□□□□□ -1.07
SMARCA4-215ENST00000590574 KRTAP10-4P60372 401 aaPredicted RBP8.37□□□□□ -1.07
SMARCA4-215ENST00000590574 CMYA5Q8N3K9 4069 aa8.37□□□□□ -1.07
SMARCA4-215ENST00000590574 STARD9Q9P2P6 4700 aa8.34□□□□□ -1.07
SMARCA4-215ENST00000590574 DNAH11Q96DT5 4516 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms