RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 UBE2DNLQ8IWF7 75 aa9.4□□□□□ -0.9
MBD1-222ENST00000590208 C14orf177Q52M58 125 aa9.38□□□□□ -0.91
MBD1-222ENST00000590208 PRAC1Q96KF2 57 aa9.38□□□□□ -0.91
MBD1-222ENST00000590208 DNAH7Q8WXX0 4024 aa9.38□□□□□ -0.91
MBD1-222ENST00000590208 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.37□□□□□ -0.91
MBD1-222ENST00000590208 FBN3Q75N90 2809 aa9.37□□□□□ -0.91
MBD1-222ENST00000590208 SPINK6Q6UWN8 80 aa9.36□□□□□ -0.91
MBD1-222ENST00000590208 WWC2-AS2Q96NR7 200 aa9.35□□□□□ -0.91
MBD1-222ENST00000590208 LINC00313P59037 77 aa9.35□□□□□ -0.91
MBD1-222ENST00000590208 ADM2Q7Z4H4 148 aa9.34□□□□□ -0.91
MBD1-222ENST00000590208 LINC00483Q53H64 154 aa9.33□□□□□ -0.92
MBD1-222ENST00000590208 FRAS1Q86XX4 4008 aa9.32□□□□□ -0.92
MBD1-222ENST00000590208 KRTAP13-3Q3SY46 172 aa9.31□□□□□ -0.92
MBD1-222ENST00000590208 APLNQ9ULZ1 77 aa9.28□□□□□ -0.92
MBD1-222ENST00000590208 ACYP2P14621 99 aa9.28□□□□□ -0.92
MBD1-222ENST00000590208 SPACA4Q8TDM5 124 aa9.27□□□□□ -0.93
MBD1-222ENST00000590208 DNAH8Q96JB1 4490 aa9.26□□□□□ -0.93
MBD1-222ENST00000590208 PSORS1C2Q9UIG4 136 aa9.26□□□□□ -0.93
MBD1-222ENST00000590208 ALMS1Q8TCU4 4167 aa9.25□□□□□ -0.93
MBD1-222ENST00000590208 RETNLBQ9BQ08 111 aa9.25□□□□□ -0.93
MBD1-222ENST00000590208 C8orf87E5RJ46 101 aa9.24□□□□□ -0.93
MBD1-222ENST00000590208 ZNF706Q9Y5V0 76 aaPredicted RBP9.23□□□□□ -0.93
MBD1-222ENST00000590208 KRTAP21-3Q3LHN1 58 aa9.22□□□□□ -0.93
MBD1-222ENST00000590208 Q6ZRN7 208 aaPredicted RBP9.22□□□□□ -0.93
MBD1-222ENST00000590208 NBDYA0A0U1RRE5 68 aa9.21□□□□□ -0.93
MBD1-222ENST00000590208 PLECQ15149 4684 aaKnown RBP9.2□□□□□ -0.94
MBD1-222ENST00000590208 A0A1B0GU69 56 aa9.2□□□□□ -0.94
MBD1-222ENST00000590208 DMAC1Q96GE9 116 aa9.2□□□□□ -0.94
MBD1-222ENST00000590208 IGLV5-52A0A0A0MRZ9 124 aa9.19□□□□□ -0.94
MBD1-222ENST00000590208 CIRBP-AS1Q8TBR5 109 aa9.19□□□□□ -0.94
MBD1-222ENST00000590208 ZNF861PO60384 105 aa9.18□□□□□ -0.94
MBD1-222ENST00000590208 PLA2G1BP04054 148 aaKnown RBP9.17□□□□□ -0.94
MBD1-222ENST00000590208 SPATA8Q6RVD6 105 aa9.14□□□□□ -0.95
MBD1-222ENST00000590208 RTL8CO15255 209 aa9.12□□□□□ -0.95
MBD1-222ENST00000590208 STARD9Q9P2P6 4700 aa9.11□□□□□ -0.95
MBD1-222ENST00000590208 MIR22HGQ0VDD5 57 aa9.1□□□□□ -0.95
MBD1-222ENST00000590208 A0A087WTM6 91 aa9.09□□□□□ -0.95
MBD1-222ENST00000590208 LINC01554Q52M75 96 aa9.09□□□□□ -0.95
MBD1-222ENST00000590208 HECTD4Q9Y4D8 3996 aa9.09□□□□□ -0.96
MBD1-222ENST00000590208 DNAH17Q9UFH2 4485 aa9.08□□□□□ -0.96
MBD1-222ENST00000590208 IGKV2-30P06310 120 aa9.07□□□□□ -0.96
MBD1-222ENST00000590208 FAM229AH3BQW9 127 aa9.06□□□□□ -0.96
MBD1-222ENST00000590208 UQCR11O14957 56 aa9.06□□□□□ -0.96
MBD1-222ENST00000590208 DYNC2H1Q8NCM8 4307 aaKnown RBP9.06□□□□□ -0.96
MBD1-222ENST00000590208 IGLV7-43P04211 117 aa9.02□□□□□ -0.97
MBD1-222ENST00000590208 C4orf48Q5BLP8 95 aa9.01□□□□□ -0.97
MBD1-222ENST00000590208 IGKV2D-30A0A075B6S6 120 aa9.01□□□□□ -0.97
MBD1-222ENST00000590208 CSAG1Q6PB30 78 aa9□□□□□ -0.97
MBD1-222ENST00000590208 KMT2AQ03164 3969 aa8.98□□□□□ -0.97
MBD1-222ENST00000590208 VPS13DQ5THJ4 4388 aa8.97□□□□□ -0.97
MBD1-222ENST00000590208 SSBP3-AS1Q7Z2R9 100 aa8.95□□□□□ -0.98
MBD1-222ENST00000590208 DNAH2Q9P225 4427 aa8.95□□□□□ -0.98
MBD1-222ENST00000590208 KRTAP16-1A8MUX0 517 aa8.94□□□□□ -0.98
MBD1-222ENST00000590208 SPINK1P00995 79 aa8.94□□□□□ -0.98
MBD1-222ENST00000590208 NUPR2A6NF83 97 aa8.92□□□□□ -0.98
MBD1-222ENST00000590208 KRTAP13-2Q52LG2 175 aa8.9□□□□□ -0.99
MBD1-222ENST00000590208 HYDINQ4G0P3 5121 aa8.86□□□□□ -0.99
MBD1-222ENST00000590208 Q8N1X5 172 aa8.86□□□□□ -0.99
MBD1-222ENST00000590208 DNAH6Q9C0G6 4158 aa8.86□□□□□ -0.99
MBD1-222ENST00000590208 H3BS24 57 aa8.85□□□□□ -0.99
MBD1-222ENST00000590208 DNAH11Q96DT5 4516 aa8.84□□□□□ -0.99
MBD1-222ENST00000590208 KMT2CQ8NEZ4 4911 aaKnown RBP8.83□□□□□ -1
MBD1-222ENST00000590208 Q6ZSA8 131 aa8.75□□□□□ -1.01
MBD1-222ENST00000590208 H0YAA0 97 aa8.75□□□□□ -1.01
MBD1-222ENST00000590208 LY6G6CO95867 125 aa8.74□□□□□ -1.01
MBD1-222ENST00000590208 C1orf134Q5TEV5 83 aa8.74□□□□□ -1.01
MBD1-222ENST00000590208 LRP1BQ9NZR2 4599 aa8.74□□□□□ -1.01
MBD1-222ENST00000590208 KRTAP10-2P60368 255 aa8.73□□□□□ -1.01
MBD1-222ENST00000590208 FLG2Q5D862 2391 aaPredicted RBP8.72□□□□□ -1.01
MBD1-222ENST00000590208 DNAH5Q8TE73 4624 aa8.72□□□□□ -1.01
MBD1-222ENST00000590208 SACSQ9NZJ4 4579 aa8.72□□□□□ -1.01
MBD1-222ENST00000590208 TYMSOSQ8TAI1 123 aa8.71□□□□□ -1.01
MBD1-222ENST00000590208 A8MUU9 505 aa8.7□□□□□ -1.02
MBD1-222ENST00000590208 KRTAP1-4P0C5Y4 121 aa8.69□□□□□ -1.02
MBD1-222ENST00000590208 LINC00304Q8N9R0 145 aa8.68□□□□□ -1.02
MBD1-222ENST00000590208 RYR3Q15413 4870 aa8.65□□□□□ -1.03
MBD1-222ENST00000590208 KRTAP25-1Q3LHN0 102 aa8.64□□□□□ -1.03
MBD1-222ENST00000590208 CRIPTQ9P021 101 aa8.6□□□□□ -1.03
MBD1-222ENST00000590208 A0A1B0GU33 70 aa8.6□□□□□ -1.03
MBD1-222ENST00000590208 KRTAP10-1P60331 282 aa8.6□□□□□ -1.03
MBD1-222ENST00000590208 VPS13BQ7Z7G8 4022 aa8.6□□□□□ -1.03
MBD1-222ENST00000590208 RYR2Q92736 4967 aa8.58□□□□□ -1.04
MBD1-222ENST00000590208 KRTAP3-1Q9BYR8 98 aa8.57□□□□□ -1.04
MBD1-222ENST00000590208 ROMO1P60602 79 aa8.54□□□□□ -1.04
MBD1-222ENST00000590208 H1FX-AS1Q4G0G2 97 aa8.54□□□□□ -1.04
MBD1-222ENST00000590208 C9orf92A6NGG3 77 aa8.51□□□□□ -1.05
MBD1-222ENST00000590208 PKHD1P08F94 4074 aa8.5□□□□□ -1.05
MBD1-222ENST00000590208 FAT2Q9NYQ8 4349 aa8.49□□□□□ -1.05
MBD1-222ENST00000590208 PKD1P98161 4303 aa8.47□□□□□ -1.05
MBD1-222ENST00000590208 COX6B2Q6YFQ2 88 aa8.41□□□□□ -1.06
MBD1-222ENST00000590208 C20orf166-AS1Q96NR2 134 aa8.37□□□□□ -1.07
MBD1-222ENST00000590208 EPPK1P58107 5090 aaKnown RBP8.36□□□□□ -1.07
MBD1-222ENST00000590208 P0C880 135 aa8.36□□□□□ -1.07
MBD1-222ENST00000590208 K7ERS5 55 aa8.36□□□□□ -1.07
MBD1-222ENST00000590208 DMBT1Q9UGM3 2413 aaPredicted RBP8.35□□□□□ -1.07
MBD1-222ENST00000590208 DYNC1H1Q14204 4646 aaKnown RBP8.3□□□□□ -1.08
MBD1-222ENST00000590208 RPS29P62273 56 aaKnown RBP8.29□□□□□ -1.08
MBD1-222ENST00000590208 A0A0D9SG42 100 aa8.26□□□□□ -1.09
MBD1-222ENST00000590208 SMR3BP02814 79 aaPredicted RBP8.26□□□□□ -1.09
MBD1-222ENST00000590208 KRTAP13-4Q3LI77 160 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms