RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 ASH1LQ9NR48 2969 aaKnown RBP6.8□□□□□ -1.32
RNF43-208ENST00000584437 KRTAP10-8P60410 259 aa6.79□□□□□ -1.32
RNF43-208ENST00000584437 DNAH14Q0VDD8 3507 aa6.79□□□□□ -1.32
RNF43-208ENST00000584437 HIVEP1P15822 2718 aa6.79□□□□□ -1.32
RNF43-208ENST00000584437 CDH23Q9H251 3354 aa6.78□□□□□ -1.32
RNF43-208ENST00000584437 XIRP2A4UGR9 3374 aa6.77□□□□□ -1.33
RNF43-208ENST00000584437 TACC2O95359 2948 aa6.74□□□□□ -1.33
RNF43-208ENST00000584437 FLNCQ14315 2725 aa6.74□□□□□ -1.33
RNF43-208ENST00000584437 NBEAQ8NFP9 2946 aa6.74□□□□□ -1.33
RNF43-208ENST00000584437 DMXL2Q8TDJ6 3036 aa6.72□□□□□ -1.33
RNF43-208ENST00000584437 KRTAP13-3Q3SY46 172 aa6.72□□□□□ -1.33
RNF43-208ENST00000584437 TPRXLQ17RH7 258 aa6.71□□□□□ -1.34
RNF43-208ENST00000584437 LRBAP50851 2863 aa6.67□□□□□ -1.34
RNF43-208ENST00000584437 ATMQ13315 3056 aa6.67□□□□□ -1.34
RNF43-208ENST00000584437 KRTAP21-3Q3LHN1 58 aa6.65□□□□□ -1.34
RNF43-208ENST00000584437 VCANP13611 3396 aa6.64□□□□□ -1.35
RNF43-208ENST00000584437 SZT2Q5T011 3432 aa6.63□□□□□ -1.35
RNF43-208ENST00000584437 CELSR2Q9HCU4 2923 aa6.63□□□□□ -1.35
RNF43-208ENST00000584437 ADGRG4Q8IZF6 3080 aa6.62□□□□□ -1.35
RNF43-208ENST00000584437 A0A1B0GVY2 172 aa6.61□□□□□ -1.35
RNF43-208ENST00000584437 SPEGQ15772 3267 aa6.6□□□□□ -1.35
RNF43-208ENST00000584437 COL12A1Q99715 3063 aa6.6□□□□□ -1.35
RNF43-208ENST00000584437 TENM4Q6N022 2769 aa6.6□□□□□ -1.35
RNF43-208ENST00000584437 FRYLO94915 3013 aa6.58□□□□□ -1.36
RNF43-208ENST00000584437 PRO2289Q9P1D8 64 aa6.57□□□□□ -1.36
RNF43-208ENST00000584437 CELSR3Q9NYQ7 3312 aa6.55□□□□□ -1.36
RNF43-208ENST00000584437 USP34Q70CQ2 3546 aa6.54□□□□□ -1.36
RNF43-208ENST00000584437 DCHS2Q6V1P9 2916 aa6.54□□□□□ -1.36
RNF43-208ENST00000584437 LAMA1P25391 3075 aa6.53□□□□□ -1.36
RNF43-208ENST00000584437 KRTAP12-2P59991 146 aa6.52□□□□□ -1.37
RNF43-208ENST00000584437 KRTAP10-10P60014 251 aa6.52□□□□□ -1.37
RNF43-208ENST00000584437 MYO15AQ9UKN7 3530 aa6.52□□□□□ -1.37
RNF43-208ENST00000584437 TGP01266 2768 aa6.52□□□□□ -1.37
RNF43-208ENST00000584437 ZZEF1O43149 2961 aa6.5□□□□□ -1.37
RNF43-208ENST00000584437 KRTAP13-4Q3LI77 160 aa6.48□□□□□ -1.37
RNF43-208ENST00000584437 TENM3Q9P273 2699 aa6.47□□□□□ -1.37
RNF43-208ENST00000584437 EYSQ5T1H1 3165 aa6.46□□□□□ -1.38
RNF43-208ENST00000584437 BOD1L1Q8NFC6 3051 aa6.46□□□□□ -1.38
RNF43-208ENST00000584437 ZANQ9Y493 2812 aa6.45□□□□□ -1.38
RNF43-208ENST00000584437 REV3LO60673 3130 aa6.45□□□□□ -1.38
RNF43-208ENST00000584437 KRTAP12-1P59990 96 aa6.44□□□□□ -1.38
RNF43-208ENST00000584437 CRYBG3Q68DQ2 2970 aa6.42□□□□□ -1.38
RNF43-208ENST00000584437 SPTBN5Q9NRC6 3674 aaKnown RBP6.4□□□□□ -1.38
RNF43-208ENST00000584437 TENM1Q9UKZ4 2725 aa6.37□□□□□ -1.39
RNF43-208ENST00000584437 HRNRQ86YZ3 2850 aaPredicted RBP6.35□□□□□ -1.39
RNF43-208ENST00000584437 NF1P21359 2839 aa6.34□□□□□ -1.39
RNF43-208ENST00000584437 KRTAP3-1Q9BYR8 98 aa6.33□□□□□ -1.4
RNF43-208ENST00000584437 TNRC18O15417 2968 aaPredicted RBP6.32□□□□□ -1.4
RNF43-208ENST00000584437 COL6A3P12111 3177 aa6.32□□□□□ -1.4
RNF43-208ENST00000584437 CFAP47Q6ZTR5 3102 aa6.31□□□□□ -1.4
RNF43-208ENST00000584437 FBN2P35556 2912 aa6.31□□□□□ -1.4
RNF43-208ENST00000584437 KRTAP10-6P60371 365 aaPredicted RBP6.22□□□□□ -1.41
RNF43-208ENST00000584437 WDFY3Q8IZQ1 3526 aa6.21□□□□□ -1.42
RNF43-208ENST00000584437 TENM2Q9NT68 2774 aa6.21□□□□□ -1.42
RNF43-208ENST00000584437 CELSR1Q9NYQ6 3014 aa6.2□□□□□ -1.42
RNF43-208ENST00000584437 PDZD2O15018 2839 aa6.16□□□□□ -1.42
RNF43-208ENST00000584437 KRTAP15-1Q3LI76 137 aa6.13□□□□□ -1.43
RNF43-208ENST00000584437 INE1O15225 51 aa6.12□□□□□ -1.43
RNF43-208ENST00000584437 DMXL1Q9Y485 3027 aa6.11□□□□□ -1.43
RNF43-208ENST00000584437 MXRA5Q9NR99 2828 aa6.09□□□□□ -1.43
RNF43-208ENST00000584437 LOC400499M0QZD8 3231 aa6.05□□□□□ -1.44
RNF43-208ENST00000584437 ASPMQ8IZT6 3477 aa6.04□□□□□ -1.44
RNF43-208ENST00000584437 DMDP11532 3685 aa6.02□□□□□ -1.44
RNF43-208ENST00000584437 ZFHX4Q86UP3 3567 aa6.01□□□□□ -1.45
RNF43-208ENST00000584437 PKD1L1Q8TDX9 2849 aa6□□□□□ -1.45
RNF43-208ENST00000584437 DCHS1Q96JQ0 3298 aa6□□□□□ -1.45
RNF43-208ENST00000584437 KRTAP3-2Q9BYR7 98 aa5.98□□□□□ -1.45
RNF43-208ENST00000584437 VWFP04275 2813 aa5.95□□□□□ -1.46
RNF43-208ENST00000584437 KRTAP3-3Q9BYR6 98 aa5.92□□□□□ -1.46
RNF43-208ENST00000584437 MUC3AQ02505 3323 aa5.91□□□□□ -1.46
RNF43-208ENST00000584437 LAMA5O15230 3695 aa5.87□□□□□ -1.47
RNF43-208ENST00000584437 SMG1Q96Q15 3661 aaKnown RBP5.85□□□□□ -1.47
RNF43-208ENST00000584437 KRTAP23-1A1A580 65 aa5.84□□□□□ -1.48
RNF43-208ENST00000584437 CSMD1Q96PZ7 3565 aa5.82□□□□□ -1.48
RNF43-208ENST00000584437 FBN3Q75N90 2809 aa5.8□□□□□ -1.48
RNF43-208ENST00000584437 KRTAP10-12P60413 245 aa5.8□□□□□ -1.48
RNF43-208ENST00000584437 MEGF8Q7Z7M0 2845 aa5.79□□□□□ -1.48
RNF43-208ENST00000584437 RELNP78509 3460 aa5.77□□□□□ -1.48
RNF43-208ENST00000584437 MT1HL1P0DM35 61 aa5.75□□□□□ -1.49
RNF43-208ENST00000584437 SVEP1Q4LDE5 3571 aa5.7□□□□□ -1.5
RNF43-208ENST00000584437 SRRM2Q9UQ35 2752 aaKnown RBP5.7□□□□□ -1.5
RNF43-208ENST00000584437 KRTAP12-3P60328 96 aa5.69□□□□□ -1.5
RNF43-208ENST00000584437 FBN1P35555 2871 aaKnown RBP5.68□□□□□ -1.5
RNF43-208ENST00000584437 SPENQ96T58 3664 aaKnown RBP5.66□□□□□ -1.5
RNF43-208ENST00000584437 COL7A1Q02388 2944 aa5.61□□□□□ -1.51
RNF43-208ENST00000584437 KRTAP10-4P60372 401 aaPredicted RBP5.6□□□□□ -1.51
RNF43-208ENST00000584437 LCE3AQ5TA76 89 aa5.59□□□□□ -1.51
RNF43-208ENST00000584437 OTOGQ6ZRI0 2925 aa5.54□□□□□ -1.52
RNF43-208ENST00000584437 CRCT1Q9UGL9 99 aa5.54□□□□□ -1.52
RNF43-208ENST00000584437 CUBNO60494 3623 aa5.54□□□□□ -1.52
RNF43-208ENST00000584437 LORP23490 312 aaPredicted RBP5.47□□□□□ -1.53
RNF43-208ENST00000584437 ANK3Q12955 4377 aaKnown RBP5.44□□□□□ -1.54
RNF43-208ENST00000584437 BSNQ9UPA5 3926 aa5.4□□□□□ -1.55
RNF43-208ENST00000584437 NBPF19A0A087WUL8 3843 aa5.37□□□□□ -1.55
RNF43-208ENST00000584437 ZFHX3Q15911 3703 aa5.32□□□□□ -1.56
RNF43-208ENST00000584437 KRTAP10-5P60370 271 aa5.31□□□□□ -1.56
RNF43-208ENST00000584437 KRTAP4-5Q9BYR2 181 aa5.31□□□□□ -1.56
RNF43-208ENST00000584437 CSMD2Q7Z408 3487 aa5.31□□□□□ -1.56
RNF43-208ENST00000584437 VPS13CQ709C8 3753 aa5.28□□□□□ -1.56
RNF43-208ENST00000584437 HUWE1Q7Z6Z7 4374 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms