RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, humanhuman

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-217ENST00000583705 HTTP42858 3142 aa6.12□□□□□ -1.43
MSI2-217ENST00000583705 KALRNO60229 2985 aa6.1□□□□□ -1.43
MSI2-217ENST00000583705 PRO2289Q9P1D8 64 aa6.1□□□□□ -1.43
MSI2-217ENST00000583705 KRTAP7-1Q8IUC3 87 aa6.08□□□□□ -1.44
MSI2-217ENST00000583705 NSD1Q96L73 2696 aaPredicted RBP6.06□□□□□ -1.44
MSI2-217ENST00000583705 XP32Q5T750 250 aa6.05□□□□□ -1.44
MSI2-217ENST00000583705 A6NN06 94 aa6.05□□□□□ -1.44
MSI2-217ENST00000583705 ASH1LQ9NR48 2969 aaKnown RBP6.04□□□□□ -1.44
MSI2-217ENST00000583705 DSPP15924 2871 aaKnown RBP6.01□□□□□ -1.45
MSI2-217ENST00000583705 LAMA1P25391 3075 aa5.99□□□□□ -1.45
MSI2-217ENST00000583705 LRBAP50851 2863 aa5.98□□□□□ -1.45
MSI2-217ENST00000583705 COL12A1Q99715 3063 aa5.98□□□□□ -1.45
MSI2-217ENST00000583705 UBR5O95071 2799 aaPredicted RBP5.97□□□□□ -1.45
MSI2-217ENST00000583705 KRTAP13-1Q8IUC0 172 aa5.97□□□□□ -1.45
MSI2-217ENST00000583705 PP632Q6XCG6 107 aa5.95□□□□□ -1.46
MSI2-217ENST00000583705 UTP20O75691 2785 aaKnown RBP5.95□□□□□ -1.46
MSI2-217ENST00000583705 HIVEP1P15822 2718 aa5.95□□□□□ -1.46
MSI2-217ENST00000583705 ATMQ13315 3056 aa5.93□□□□□ -1.46
MSI2-217ENST00000583705 TACC2O95359 2948 aa5.92□□□□□ -1.46
MSI2-217ENST00000583705 USP34Q70CQ2 3546 aa5.92□□□□□ -1.46
MSI2-217ENST00000583705 BOD1L1Q8NFC6 3051 aa5.91□□□□□ -1.46
MSI2-217ENST00000583705 FRYLO94915 3013 aa5.87□□□□□ -1.47
MSI2-217ENST00000583705 KRTAP21-3Q3LHN1 58 aa5.86□□□□□ -1.47
MSI2-217ENST00000583705 TPRXLQ17RH7 258 aa5.86□□□□□ -1.47
MSI2-217ENST00000583705 ASPMQ8IZT6 3477 aa5.83□□□□□ -1.48
MSI2-217ENST00000583705 CHD9Q3L8U1 2897 aa5.83□□□□□ -1.48
MSI2-217ENST00000583705 H0YAA0 97 aa5.83□□□□□ -1.48
MSI2-217ENST00000583705 ZZEF1O43149 2961 aa5.82□□□□□ -1.48
MSI2-217ENST00000583705 SPTBN5Q9NRC6 3674 aaKnown RBP5.82□□□□□ -1.48
MSI2-217ENST00000583705 KRTAP1-4P0C5Y4 121 aa5.8□□□□□ -1.48
MSI2-217ENST00000583705 ITPR1Q14643 2758 aa5.79□□□□□ -1.48
MSI2-217ENST00000583705 ADGRG4Q8IZF6 3080 aa5.79□□□□□ -1.48
MSI2-217ENST00000583705 TENM1Q9UKZ4 2725 aa5.77□□□□□ -1.49
MSI2-217ENST00000583705 FLNCQ14315 2725 aa5.76□□□□□ -1.49
MSI2-217ENST00000583705 CELSR2Q9HCU4 2923 aa5.74□□□□□ -1.49
MSI2-217ENST00000583705 ZFHX4Q86UP3 3567 aa5.74□□□□□ -1.49
MSI2-217ENST00000583705 NBPF19A0A087WUL8 3843 aa5.73□□□□□ -1.49
MSI2-217ENST00000583705 MYO15AQ9UKN7 3530 aa5.73□□□□□ -1.49
MSI2-217ENST00000583705 KRTAP13-3Q3SY46 172 aa5.72□□□□□ -1.49
MSI2-217ENST00000583705 CRCT1Q9UGL9 99 aa5.72□□□□□ -1.49
MSI2-217ENST00000583705 LOC400499M0QZD8 3231 aa5.72□□□□□ -1.49
MSI2-217ENST00000583705 EYSQ5T1H1 3165 aa5.71□□□□□ -1.49
MSI2-217ENST00000583705 TENM4Q6N022 2769 aa5.71□□□□□ -1.5
MSI2-217ENST00000583705 KRTAP12-2P59991 146 aa5.7□□□□□ -1.5
MSI2-217ENST00000583705 CELSR1Q9NYQ6 3014 aa5.66□□□□□ -1.5
MSI2-217ENST00000583705 TNRC18O15417 2968 aaPredicted RBP5.65□□□□□ -1.5
MSI2-217ENST00000583705 WDFY3Q8IZQ1 3526 aa5.65□□□□□ -1.5
MSI2-217ENST00000583705 DCHS1Q96JQ0 3298 aa5.61□□□□□ -1.51
MSI2-217ENST00000583705 DCHS2Q6V1P9 2916 aa5.6□□□□□ -1.51
MSI2-217ENST00000583705 KRTAP15-1Q3LI76 137 aa5.6□□□□□ -1.51
MSI2-217ENST00000583705 NF1P21359 2839 aa5.6□□□□□ -1.51
MSI2-217ENST00000583705 NBEAQ8NFP9 2946 aa5.58□□□□□ -1.52
MSI2-217ENST00000583705 TENM2Q9NT68 2774 aa5.58□□□□□ -1.52
MSI2-217ENST00000583705 TENM3Q9P273 2699 aa5.56□□□□□ -1.52
MSI2-217ENST00000583705 DMXL1Q9Y485 3027 aa5.56□□□□□ -1.52
MSI2-217ENST00000583705 PKD1L1Q8TDX9 2849 aa5.51□□□□□ -1.53
MSI2-217ENST00000583705 TGP01266 2768 aa5.51□□□□□ -1.53
MSI2-217ENST00000583705 VWFP04275 2813 aa5.5□□□□□ -1.53
MSI2-217ENST00000583705 LAMA5O15230 3695 aa5.49□□□□□ -1.53
MSI2-217ENST00000583705 PDZD2O15018 2839 aa5.48□□□□□ -1.53
MSI2-217ENST00000583705 NIPBLQ6KC79 2804 aaeCLIP5.47□□□□□ -1.53
MSI2-217ENST00000583705 KRTAP13-4Q3LI77 160 aa5.46□□□□□ -1.54
MSI2-217ENST00000583705 ZANQ9Y493 2812 aa5.45□□□□□ -1.54
MSI2-217ENST00000583705 CSMD1Q96PZ7 3565 aa5.41□□□□□ -1.54
MSI2-217ENST00000583705 FBN2P35556 2912 aa5.38□□□□□ -1.55
MSI2-217ENST00000583705 KRTAP12-1P59990 96 aa5.36□□□□□ -1.55
MSI2-217ENST00000583705 RELNP78509 3460 aa5.35□□□□□ -1.55
MSI2-217ENST00000583705 ZFHX3Q15911 3703 aa5.35□□□□□ -1.55
MSI2-217ENST00000583705 SPENQ96T58 3664 aaKnown RBP5.24□□□□□ -1.57
MSI2-217ENST00000583705 SMG1Q96Q15 3661 aaKnown RBP5.23□□□□□ -1.57
MSI2-217ENST00000583705 KRTAP10-12P60413 245 aa5.2□□□□□ -1.58
MSI2-217ENST00000583705 DMDP11532 3685 aa5.17□□□□□ -1.58
MSI2-217ENST00000583705 CUBNO60494 3623 aa5.16□□□□□ -1.58
MSI2-217ENST00000583705 MXRA5Q9NR99 2828 aa5.16□□□□□ -1.58
MSI2-217ENST00000583705 HRNRQ86YZ3 2850 aaPredicted RBP5.15□□□□□ -1.58
MSI2-217ENST00000583705 LORP23490 312 aaPredicted RBP5.14□□□□□ -1.59
MSI2-217ENST00000583705 KRTAP3-1Q9BYR8 98 aa5.13□□□□□ -1.59
MSI2-217ENST00000583705 MUC3AQ02505 3323 aa5.12□□□□□ -1.59
MSI2-217ENST00000583705 SRRM2Q9UQ35 2752 aaKnown RBP5.11□□□□□ -1.59
MSI2-217ENST00000583705 MEGF8Q7Z7M0 2845 aa5.09□□□□□ -1.59
MSI2-217ENST00000583705 COL7A1Q02388 2944 aa5.07□□□□□ -1.6
MSI2-217ENST00000583705 KRTAP10-5P60370 271 aa5.06□□□□□ -1.6
MSI2-217ENST00000583705 SVEP1Q4LDE5 3571 aa5.05□□□□□ -1.6
MSI2-217ENST00000583705 KRTAP10-6P60371 365 aaPredicted RBP5.03□□□□□ -1.6
MSI2-217ENST00000583705 KRTAP4-5Q9BYR2 181 aa5.03□□□□□ -1.6
MSI2-217ENST00000583705 CSMD2Q7Z408 3487 aa5.01□□□□□ -1.61
MSI2-217ENST00000583705 KRTAP12-3P60328 96 aa4.98□□□□□ -1.61
MSI2-217ENST00000583705 KRTAP8-1Q8IUC2 63 aa4.98□□□□□ -1.61
MSI2-217ENST00000583705 INE1O15225 51 aa4.96□□□□□ -1.62
MSI2-217ENST00000583705 LCE3AQ5TA76 89 aa4.95□□□□□ -1.62
MSI2-217ENST00000583705 FBN3Q75N90 2809 aa4.93□□□□□ -1.62
MSI2-217ENST00000583705 CSMD3Q7Z407 3707 aa4.92□□□□□ -1.62
MSI2-217ENST00000583705 TRRAPQ9Y4A5 3859 aa4.92□□□□□ -1.62
MSI2-217ENST00000583705 MT1HL1P0DM35 61 aa4.9□□□□□ -1.63
MSI2-217ENST00000583705 FBN1P35555 2871 aaKnown RBP4.87□□□□□ -1.63
MSI2-217ENST00000583705 VPS13CQ709C8 3753 aa4.82□□□□□ -1.64
MSI2-217ENST00000583705 ANK3Q12955 4377 aaKnown RBP4.76□□□□□ -1.65
MSI2-217ENST00000583705 KRTAP3-3Q9BYR6 98 aa4.76□□□□□ -1.65
MSI2-217ENST00000583705 KRTAP3-2Q9BYR7 98 aa4.72□□□□□ -1.65
MSI2-217ENST00000583705 HUWE1Q7Z6Z7 4374 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms