RNA–Protein interactions for RNA: ENST00000577468.2

PTPRM-204, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-204ENST00000577468 IGFL1Q6UW32 110 aa1.56□□□□□ -2.16
PTPRM-204ENST00000577468 UBE2DNLQ8IWF7 75 aa1.56□□□□□ -2.16
PTPRM-204ENST00000577468 SETD2Q9BYW2 2564 aaPredicted RBP1.56□□□□□ -2.16
PTPRM-204ENST00000577468 COL12A1Q99715 3063 aa1.56□□□□□ -2.16
PTPRM-204ENST00000577468 COL6A6A6NMZ7 2263 aa1.56□□□□□ -2.16
PTPRM-204ENST00000577468 WNK2Q9Y3S1 2297 aa1.56□□□□□ -2.16
PTPRM-204ENST00000577468 UBR5O95071 2799 aaPredicted RBP1.56□□□□□ -2.16
PTPRM-204ENST00000577468 POLQO75417 2590 aa1.55□□□□□ -2.16
PTPRM-204ENST00000577468 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.55□□□□□ -2.161e-6■■■■□ 25.3
PTPRM-204ENST00000577468 C2CD3Q4AC94 2353 aa1.55□□□□□ -2.16
PTPRM-204ENST00000577468 MGAQ8IWI9 3026 aa1.55□□□□□ -2.16
PTPRM-204ENST00000577468 SPINK13Q1W4C9 94 aa1.55□□□□□ -2.16
PTPRM-204ENST00000577468 CLPSL2Q6UWE3 100 aa1.55□□□□□ -2.16
PTPRM-204ENST00000577468 PP632Q6XCG6 107 aa1.55□□□□□ -2.16
PTPRM-204ENST00000577468 Q6ZSA8 131 aa1.55□□□□□ -2.16
PTPRM-204ENST00000577468 CELSR3Q9NYQ7 3312 aa1.54□□□□□ -2.16
PTPRM-204ENST00000577468 NBASA2RRP1 2371 aa1.54□□□□□ -2.16
PTPRM-204ENST00000577468 FN1P02751 2386 aaKnown RBP1.54□□□□□ -2.16
PTPRM-204ENST00000577468 DEFB110Q30KQ9 67 aa1.54□□□□□ -2.16
PTPRM-204ENST00000577468 DEFB109BQ30KR1 87 aa1.54□□□□□ -2.16
PTPRM-204ENST00000577468 KRTAP21-3Q3LHN1 58 aa1.54□□□□□ -2.16
PTPRM-204ENST00000577468 WDFY3Q8IZQ1 3526 aa1.54□□□□□ -2.16
PTPRM-204ENST00000577468 SPTBN1Q01082 2364 aaKnown RBP1.54□□□□□ -2.16
PTPRM-204ENST00000577468 USP9YO00507 2555 aaPredicted RBP1.53□□□□□ -2.16
PTPRM-204ENST00000577468 ITPR2Q14571 2701 aa1.53□□□□□ -2.16
PTPRM-204ENST00000577468 LRBAP50851 2863 aa1.53□□□□□ -2.16
PTPRM-204ENST00000577468 H3BUA1 57 aa1.53□□□□□ -2.16
PTPRM-204ENST00000577468 APELAP0DMC3 54 aa1.53□□□□□ -2.16
PTPRM-204ENST00000577468 RPL37P61927 97 aaKnown RBP1.53□□□□□ -2.16
PTPRM-204ENST00000577468 ATMQ13315 3056 aa1.53□□□□□ -2.16
PTPRM-204ENST00000577468 H1FX-AS1Q4G0G2 97 aa1.53□□□□□ -2.16
PTPRM-204ENST00000577468 LAMA5O15230 3695 aa1.53□□□□□ -2.17
PTPRM-204ENST00000577468 TLN1Q9Y490 2541 aaKnown RBP1.52□□□□□ -2.17
PTPRM-204ENST00000577468 SMG1Q96Q15 3661 aaKnown RBP1.52□□□□□ -2.17
PTPRM-204ENST00000577468 PCLOQ9Y6V0 5065 aa1.52□□□□□ -2.17
PTPRM-204ENST00000577468 FBN2P35556 2912 aa1.52□□□□□ -2.17
PTPRM-204ENST00000577468 SPRR1AP35321 89 aa1.52□□□□□ -2.17
PTPRM-204ENST00000577468 BOD1L1Q8NFC6 3051 aa1.52□□□□□ -2.17
PTPRM-204ENST00000577468 PRRC2CQ9Y520 2896 aaKnown RBP1.52□□□□□ -2.17
PTPRM-204ENST00000577468 UBR4Q5T4S7 5183 aa1.51□□□□□ -2.17
PTPRM-204ENST00000577468 LYNX1P0DP58 116 aa1.51□□□□□ -2.17
PTPRM-204ENST00000577468 DEFB130BP0DP73 79 aa1.51□□□□□ -2.17
PTPRM-204ENST00000577468 DEFB130AP0DP74 79 aa1.51□□□□□ -2.17
PTPRM-204ENST00000577468 DEFB133Q30KQ1 61 aa1.51□□□□□ -2.17
PTPRM-204ENST00000577468 KRTAP5-7Q6L8G8 165 aa1.51□□□□□ -2.17
PTPRM-204ENST00000577468 NF1P21359 2839 aa1.51□□□□□ -2.17
PTPRM-204ENST00000577468 CRYBG3Q68DQ2 2970 aa1.5□□□□□ -2.17
PTPRM-204ENST00000577468 CELSR2Q9HCU4 2923 aa1.5□□□□□ -2.17
PTPRM-204ENST00000577468 KRTAP13-2Q52LG2 175 aa1.5□□□□□ -2.17
PTPRM-204ENST00000577468 DEFB105AQ8NG35 78 aa1.5□□□□□ -2.17
PTPRM-204ENST00000577468 C10orf95Q9H7T3 257 aa1.5□□□□□ -2.17
PTPRM-204ENST00000577468 MTORP42345 2549 aa1.49□□□□□ -2.17
PTPRM-204ENST00000577468 MAP1AP78559 2803 aaPredicted RBP1.49□□□□□ -2.17
PTPRM-204ENST00000577468 NIPBLQ6KC79 2804 aaeCLIP1.49□□□□□ -2.17
PTPRM-204ENST00000577468 F8P00451 2351 aa1.49□□□□□ -2.17
PTPRM-204ENST00000577468 SPRR1BP22528 89 aa1.49□□□□□ -2.17
PTPRM-204ENST00000577468 RHPN1-AS1Q9BWJ2 59 aa1.49□□□□□ -2.17
PTPRM-204ENST00000577468 RELNP78509 3460 aa1.49□□□□□ -2.17
PTPRM-204ENST00000577468 CCDC168Q8NDH2 2452 aa1.49□□□□□ -2.17
PTPRM-204ENST00000577468 WNK1Q9H4A3 2382 aa1.49□□□□□ -2.17
PTPRM-204ENST00000577468 PDZD2O15018 2839 aa1.48□□□□□ -2.17
PTPRM-204ENST00000577468 JMJD1CQ15652 2540 aa1.48□□□□□ -2.17
PTPRM-204ENST00000577468 NBEAL1Q6ZS30 2694 aa1.48□□□□□ -2.17
PTPRM-204ENST00000577468 H3BUX3 64 aa1.48□□□□□ -2.17
PTPRM-204ENST00000577468 K7EIL1 84 aa1.48□□□□□ -2.17
PTPRM-204ENST00000577468 LELP1Q5T871 98 aa1.48□□□□□ -2.17
PTPRM-204ENST00000577468 UNQ6190/PRO20217Q6UXQ8 127 aa1.48□□□□□ -2.17
PTPRM-204ENST00000577468 ANKHD1Q8IWZ3 2542 aaKnown RBP1.48□□□□□ -2.17
PTPRM-204ENST00000577468 HIVEP1P15822 2718 aa1.48□□□□□ -2.17
PTPRM-204ENST00000577468 TACC2O95359 2948 aa1.48□□□□□ -2.17
PTPRM-204ENST00000577468 OTOGQ6ZRI0 2925 aa1.48□□□□□ -2.17
PTPRM-204ENST00000577468 SPG11Q96JI7 2443 aa1.48□□□□□ -2.17
PTPRM-204ENST00000577468 PCNX1Q96RV3 2341 aa1.48□□□□□ -2.17
PTPRM-204ENST00000577468 APCP25054 2843 aa1.47□□□□□ -2.17
PTPRM-204ENST00000577468 CELSR1Q9NYQ6 3014 aa1.47□□□□□ -2.17
PTPRM-204ENST00000577468 BRD3OSQ6XYD6 125 aa1.47□□□□□ -2.17
PTPRM-204ENST00000577468 DEFB108BQ8NET1 73 aa1.47□□□□□ -2.17
PTPRM-204ENST00000577468 U3KQA8 63 aa1.47□□□□□ -2.17
PTPRM-204ENST00000577468 FLG2Q5D862 2391 aaPredicted RBP1.46□□□□□ -2.18
PTPRM-204ENST00000577468 DEFB1P60022 68 aa1.46□□□□□ -2.18
PTPRM-204ENST00000577468 ADGRG4Q8IZF6 3080 aa1.46□□□□□ -2.18
PTPRM-204ENST00000577468 RYR3Q15413 4870 aa1.46□□□□□ -2.18
PTPRM-204ENST00000577468 HIVEP3Q5T1R4 2406 aa1.45□□□□□ -2.18
PTPRM-204ENST00000577468 PRLHP81277 87 aa1.45□□□□□ -2.18
PTPRM-204ENST00000577468 SMR3AQ99954 134 aa1.45□□□□□ -2.18
PTPRM-204ENST00000577468 LCE3DQ9BYE3 92 aa1.45□□□□□ -2.18
PTPRM-204ENST00000577468 APLNQ9ULZ1 77 aa1.45□□□□□ -2.18
PTPRM-204ENST00000577468 ATRQ13535 2644 aa1.44□□□□□ -2.18
PTPRM-204ENST00000577468 ACANP16112 2415 aa1.44□□□□□ -2.18
PTPRM-204ENST00000577468 PKDREJQ9NTG1 2253 aa1.44□□□□□ -2.18
PTPRM-204ENST00000577468 COL6A5A8TX70 2615 aa1.44□□□□□ -2.18
PTPRM-204ENST00000577468 STAB1Q9NY15 2570 aa1.44□□□□□ -2.18
PTPRM-204ENST00000577468 DCHS2Q6V1P9 2916 aa1.43□□□□□ -2.18
PTPRM-204ENST00000577468 BIRC6Q9NR09 4857 aa1.43□□□□□ -2.18
PTPRM-204ENST00000577468 FLNAP21333 2647 aaKnown RBP1.43□□□□□ -2.18
PTPRM-204ENST00000577468 FBN1P35555 2871 aaKnown RBP1.43□□□□□ -2.18
PTPRM-204ENST00000577468 NOTCH1P46531 2555 aa1.43□□□□□ -2.18
PTPRM-204ENST00000577468 CSPG4Q6UVK1 2322 aa1.42□□□□□ -2.18
PTPRM-204ENST00000577468 SPRR5A0A1B0GTR4 108 aa1.42□□□□□ -2.18
PTPRM-204ENST00000577468 CSMD1Q96PZ7 3565 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms