RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-216ENST00000577001 Q5W150 140 aa8.8□□□□□ -1
PRPF8-216ENST00000577001 SPRR1BP22528 89 aa8.79□□□□□ -1
PRPF8-216ENST00000577001 A6NED7 52 aa8.79□□□□□ -1
PRPF8-216ENST00000577001 Q5VV11 94 aa8.77□□□□□ -1.01
PRPF8-216ENST00000577001 Q8N9P0 234 aaPredicted RBP8.77□□□□□ -1.01
PRPF8-216ENST00000577001 ZNF861PO60384 105 aa8.77□□□□□ -1.01
PRPF8-216ENST00000577001 A0A1B0GVX0 72 aa8.76□□□□□ -1.01
PRPF8-216ENST00000577001 C1orf134Q5TEV5 83 aa8.76□□□□□ -1.01
PRPF8-216ENST00000577001 CYP4F30PQ9H0H9 118 aa8.74□□□□□ -1.01
PRPF8-216ENST00000577001 PMAIP1Q13794 54 aa8.74□□□□□ -1.01
PRPF8-216ENST00000577001 Q1T7F1 81 aa8.74□□□□□ -1.01
PRPF8-216ENST00000577001 MRPL34Q9BQ48 92 aaKnown RBP8.73□□□□□ -1.01
PRPF8-216ENST00000577001 HYDINQ4G0P3 5121 aa8.71□□□□□ -1.02
PRPF8-216ENST00000577001 LRP1BQ9NZR2 4599 aa8.7□□□□□ -1.02
PRPF8-216ENST00000577001 IGLV7-43P04211 117 aa8.69□□□□□ -1.02
PRPF8-216ENST00000577001 HRES1P13985 223 aa8.68□□□□□ -1.02
PRPF8-216ENST00000577001 DYNC2H1Q8NCM8 4307 aaKnown RBP8.67□□□□□ -1.02
PRPF8-216ENST00000577001 IGKV2D-30A0A075B6S6 120 aa8.67□□□□□ -1.02
PRPF8-216ENST00000577001 IGKV2-30P06310 120 aa8.67□□□□□ -1.02
PRPF8-216ENST00000577001 Q6ZR54 194 aa8.67□□□□□ -1.02
PRPF8-216ENST00000577001 SMR3BP02814 79 aaPredicted RBP8.65□□□□□ -1.02
PRPF8-216ENST00000577001 SPINK1P00995 79 aa8.65□□□□□ -1.03
PRPF8-216ENST00000577001 SPINK7P58062 85 aa8.65□□□□□ -1.03
PRPF8-216ENST00000577001 LCA10Q71F78 164 aa8.65□□□□□ -1.03
PRPF8-216ENST00000577001 ZNF706Q9Y5V0 76 aaPredicted RBP8.65□□□□□ -1.03
PRPF8-216ENST00000577001 IGLV7-46A0A075B6I9 117 aa8.64□□□□□ -1.03
PRPF8-216ENST00000577001 V9GYY9 64 aa8.64□□□□□ -1.03
PRPF8-216ENST00000577001 PLAC8Q9NZF1 115 aa8.63□□□□□ -1.03
PRPF8-216ENST00000577001 KRTAP10-1P60331 282 aa8.62□□□□□ -1.03
PRPF8-216ENST00000577001 LINC00483Q53H64 154 aa8.6□□□□□ -1.03
PRPF8-216ENST00000577001 SPANXA2-OT1Q8N9U9 137 aa8.59□□□□□ -1.03
PRPF8-216ENST00000577001 DNAH5Q8TE73 4624 aa8.58□□□□□ -1.04
PRPF8-216ENST00000577001 KRTAP13-2Q52LG2 175 aa8.57□□□□□ -1.04
PRPF8-216ENST00000577001 TP53AIP1Q9HCN2 124 aa8.57□□□□□ -1.04
PRPF8-216ENST00000577001 ALMS1Q8TCU4 4167 aa8.56□□□□□ -1.04
PRPF8-216ENST00000577001 LINC00313P59037 77 aa8.56□□□□□ -1.04
PRPF8-216ENST00000577001 LIMD2Q9BT23 127 aa8.56□□□□□ -1.04
PRPF8-216ENST00000577001 H3BPC8 53 aa8.56□□□□□ -1.04
PRPF8-216ENST00000577001 FAT2Q9NYQ8 4349 aa8.55□□□□□ -1.04
PRPF8-216ENST00000577001 DMBT1Q9UGM3 2413 aaPredicted RBP8.55□□□□□ -1.04
PRPF8-216ENST00000577001 FLG2Q5D862 2391 aaPredicted RBP8.52□□□□□ -1.05
PRPF8-216ENST00000577001 LOC101927531A0A1B0GV80 90 aa8.51□□□□□ -1.05
PRPF8-216ENST00000577001 Q8N1X5 172 aa8.51□□□□□ -1.05
PRPF8-216ENST00000577001 PLA2G1BP04054 148 aaKnown RBP8.51□□□□□ -1.05
PRPF8-216ENST00000577001 VPS13BQ7Z7G8 4022 aa8.5□□□□□ -1.05
PRPF8-216ENST00000577001 C9orf92A6NGG3 77 aa8.5□□□□□ -1.05
PRPF8-216ENST00000577001 PKHD1P08F94 4074 aa8.49□□□□□ -1.05
PRPF8-216ENST00000577001 ASB16-AS1Q495Z4 193 aa8.49□□□□□ -1.05
PRPF8-216ENST00000577001 FAT1Q14517 4588 aa8.49□□□□□ -1.05
PRPF8-216ENST00000577001 SEC61GP60059 68 aa8.48□□□□□ -1.05
PRPF8-216ENST00000577001 C4orf48Q5BLP8 95 aa8.45□□□□□ -1.06
PRPF8-216ENST00000577001 PRAC1Q96KF2 57 aa8.44□□□□□ -1.06
PRPF8-216ENST00000577001 TYMSOSQ8TAI1 123 aa8.42□□□□□ -1.06
PRPF8-216ENST00000577001 Q75L30 129 aa8.42□□□□□ -1.06
PRPF8-216ENST00000577001 ADM2Q7Z4H4 148 aa8.41□□□□□ -1.06
PRPF8-216ENST00000577001 C7orf65Q6ZTY9 151 aa8.41□□□□□ -1.06
PRPF8-216ENST00000577001 ACYP2P14621 99 aa8.39□□□□□ -1.07
PRPF8-216ENST00000577001 LINC01558Q9Y6Z2 57 aa8.39□□□□□ -1.07
PRPF8-216ENST00000577001 SSBP3-AS1Q7Z2R9 100 aa8.39□□□□□ -1.07
PRPF8-216ENST00000577001 A0A1B0GU69 56 aa8.36□□□□□ -1.07
PRPF8-216ENST00000577001 KRTAP13-3Q3SY46 172 aa8.36□□□□□ -1.07
PRPF8-216ENST00000577001 KRTAP1-4P0C5Y4 121 aa8.34□□□□□ -1.08
PRPF8-216ENST00000577001 CDC42SE1Q9NRR8 79 aa8.34□□□□□ -1.08
PRPF8-216ENST00000577001 FAM229AH3BQW9 127 aa8.33□□□□□ -1.08
PRPF8-216ENST00000577001 ATP11AUNQ6ZP68 121 aa8.3□□□□□ -1.08
PRPF8-216ENST00000577001 PKD1P98161 4303 aa8.29□□□□□ -1.08
PRPF8-216ENST00000577001 KRTAP21-3Q3LHN1 58 aa8.28□□□□□ -1.08
PRPF8-216ENST00000577001 MYCBP2O75592 4640 aa8.28□□□□□ -1.08
PRPF8-216ENST00000577001 C8orf87E5RJ46 101 aa8.28□□□□□ -1.08
PRPF8-216ENST00000577001 RBM12B-AS1Q9P1G2 102 aa8.27□□□□□ -1.09
PRPF8-216ENST00000577001 A6NN06 94 aa8.26□□□□□ -1.09
PRPF8-216ENST00000577001 KTN1-AS1Q86SY8 53 aa8.26□□□□□ -1.09
PRPF8-216ENST00000577001 KRTAP16-1A8MUX0 517 aa8.25□□□□□ -1.09
PRPF8-216ENST00000577001 DMAC1Q96GE9 116 aa8.25□□□□□ -1.09
PRPF8-216ENST00000577001 LINC00304Q8N9R0 145 aa8.22□□□□□ -1.09
PRPF8-216ENST00000577001 DYNC1H1Q14204 4646 aaKnown RBP8.22□□□□□ -1.09
PRPF8-216ENST00000577001 LRP1Q07954 4544 aaKnown RBP8.18□□□□□ -1.1
PRPF8-216ENST00000577001 Q6ZSA8 131 aa8.18□□□□□ -1.1
PRPF8-216ENST00000577001 MIR22HGQ0VDD5 57 aa8.17□□□□□ -1.1
PRPF8-216ENST00000577001 CRIPTQ9P021 101 aa8.16□□□□□ -1.1
PRPF8-216ENST00000577001 SACSQ9NZJ4 4579 aa8.14□□□□□ -1.11
PRPF8-216ENST00000577001 KMT2CQ8NEZ4 4911 aaKnown RBP8.11□□□□□ -1.11
PRPF8-216ENST00000577001 UQCR11O14957 56 aa8.09□□□□□ -1.11
PRPF8-216ENST00000577001 SPATA8Q6RVD6 105 aa8.07□□□□□ -1.12
PRPF8-216ENST00000577001 APOBP04114 4563 aaKnown RBP8.05□□□□□ -1.12
PRPF8-216ENST00000577001 FAT3Q8TDW7 4589 aa8.02□□□□□ -1.13
PRPF8-216ENST00000577001 CSAG1Q6PB30 78 aa8□□□□□ -1.13
PRPF8-216ENST00000577001 KRTAP3-1Q9BYR8 98 aa7.98□□□□□ -1.13
PRPF8-216ENST00000577001 A0A0D9SG42 100 aa7.95□□□□□ -1.14
PRPF8-216ENST00000577001 H0YAA0 97 aa7.9□□□□□ -1.14
PRPF8-216ENST00000577001 HSPG2P98160 4391 aa7.9□□□□□ -1.14
PRPF8-216ENST00000577001 KIAA1109Q2LD37 5005 aa7.88□□□□□ -1.15
PRPF8-216ENST00000577001 A0A1B0GU33 70 aa7.86□□□□□ -1.15
PRPF8-216ENST00000577001 LPAP08519 4548 aa7.82□□□□□ -1.16
PRPF8-216ENST00000577001 PKHD1L1Q86WI1 4243 aa7.82□□□□□ -1.16
PRPF8-216ENST00000577001 RYR2Q92736 4967 aa7.81□□□□□ -1.16
PRPF8-216ENST00000577001 A8MUU9 505 aa7.79□□□□□ -1.16
PRPF8-216ENST00000577001 KRTAP10-8P60410 259 aa7.79□□□□□ -1.16
PRPF8-216ENST00000577001 KRTAP10-4P60372 401 aaPredicted RBP7.78□□□□□ -1.16
PRPF8-216ENST00000577001 C20orf166-AS1Q96NR2 134 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms