RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 Q5VV11 94 aa12.13□□□□□ -0.47
SCRT1-201ENST00000569446 SPANXA2-OT1Q8N9U9 137 aa12.11□□□□□ -0.47
SCRT1-201ENST00000569446 LCE6AA0A183 80 aa12.11□□□□□ -0.47
SCRT1-201ENST00000569446 Q96NJ1 140 aa12.1□□□□□ -0.47
SCRT1-201ENST00000569446 LYSTQ99698 3801 aa12.1□□□□□ -0.47
SCRT1-201ENST00000569446 IGLV7-46A0A075B6I9 117 aa12.1□□□□□ -0.47
SCRT1-201ENST00000569446 Q5W150 140 aa12.09□□□□□ -0.47
SCRT1-201ENST00000569446 TYMSOSQ8TAI1 123 aa12.09□□□□□ -0.47
SCRT1-201ENST00000569446 PLAC8Q9NZF1 115 aa12.08□□□□□ -0.48
SCRT1-201ENST00000569446 LOC101927531A0A1B0GV80 90 aa12.06□□□□□ -0.48
SCRT1-201ENST00000569446 HRES1P13985 223 aa12.06□□□□□ -0.48
SCRT1-201ENST00000569446 C7orf65Q6ZTY9 151 aa12.06□□□□□ -0.48
SCRT1-201ENST00000569446 KRTAP13-1Q8IUC0 172 aa12.06□□□□□ -0.48
SCRT1-201ENST00000569446 ACYP2P14621 99 aa12.06□□□□□ -0.48
SCRT1-201ENST00000569446 HUWE1Q7Z6Z7 4374 aaKnown RBP12.04□□□□□ -0.48
SCRT1-201ENST00000569446 C9orf92A6NGG3 77 aa12.02□□□□□ -0.48
SCRT1-201ENST00000569446 FLG2Q5D862 2391 aaPredicted RBP12.02□□□□□ -0.49
SCRT1-201ENST00000569446 A0A1B0GU69 56 aa12.02□□□□□ -0.49
SCRT1-201ENST00000569446 SEC61GP60059 68 aa12□□□□□ -0.49
SCRT1-201ENST00000569446 SSBP3-AS1Q7Z2R9 100 aa12□□□□□ -0.49
SCRT1-201ENST00000569446 Q8N1X5 172 aa11.99□□□□□ -0.49
SCRT1-201ENST00000569446 SPINK7P58062 85 aa11.98□□□□□ -0.49
SCRT1-201ENST00000569446 KRTAP10-1P60331 282 aa11.98□□□□□ -0.49
SCRT1-201ENST00000569446 FAM229AH3BQW9 127 aa11.96□□□□□ -0.49
SCRT1-201ENST00000569446 Q6ZR54 194 aa11.95□□□□□ -0.5
SCRT1-201ENST00000569446 LINC00483Q53H64 154 aa11.94□□□□□ -0.5
SCRT1-201ENST00000569446 LCA10Q71F78 164 aa11.88□□□□□ -0.51
SCRT1-201ENST00000569446 C8orf87E5RJ46 101 aa11.88□□□□□ -0.51
SCRT1-201ENST00000569446 ATP11AUNQ6ZP68 121 aa11.85□□□□□ -0.51
SCRT1-201ENST00000569446 CMYA5Q8N3K9 4069 aa11.84□□□□□ -0.51
SCRT1-201ENST00000569446 Q75L30 129 aa11.79□□□□□ -0.52
SCRT1-201ENST00000569446 KRTAP13-2Q52LG2 175 aa11.79□□□□□ -0.52
SCRT1-201ENST00000569446 LINC00304Q8N9R0 145 aa11.77□□□□□ -0.53
SCRT1-201ENST00000569446 PLECQ15149 4684 aaKnown RBP11.76□□□□□ -0.53
SCRT1-201ENST00000569446 CDC42SE1Q9NRR8 79 aa11.76□□□□□ -0.53
SCRT1-201ENST00000569446 LINC01558Q9Y6Z2 57 aa11.76□□□□□ -0.53
SCRT1-201ENST00000569446 PRAC1Q96KF2 57 aa11.73□□□□□ -0.53
SCRT1-201ENST00000569446 DNAH9Q9NYC9 4486 aa11.71□□□□□ -0.53
SCRT1-201ENST00000569446 KTN1-AS1Q86SY8 53 aa11.68□□□□□ -0.54
SCRT1-201ENST00000569446 MIR22HGQ0VDD5 57 aa11.66□□□□□ -0.54
SCRT1-201ENST00000569446 UQCR11O14957 56 aa11.63□□□□□ -0.55
SCRT1-201ENST00000569446 DNAH7Q8WXX0 4024 aa11.62□□□□□ -0.55
SCRT1-201ENST00000569446 DNAH3Q8TD57 4116 aa11.61□□□□□ -0.55
SCRT1-201ENST00000569446 RBM12B-AS1Q9P1G2 102 aa11.56□□□□□ -0.56
SCRT1-201ENST00000569446 ASB16-AS1Q495Z4 193 aa11.56□□□□□ -0.56
SCRT1-201ENST00000569446 DMAC1Q96GE9 116 aa11.54□□□□□ -0.56
SCRT1-201ENST00000569446 STARD9Q9P2P6 4700 aa11.54□□□□□ -0.56
SCRT1-201ENST00000569446 KMT2AQ03164 3969 aa11.52□□□□□ -0.57
SCRT1-201ENST00000569446 ADM2Q7Z4H4 148 aa11.51□□□□□ -0.57
SCRT1-201ENST00000569446 PRKDCP78527 4128 aaKnown RBP11.5□□□□□ -0.57
SCRT1-201ENST00000569446 FRAS1Q86XX4 4008 aa11.44□□□□□ -0.58
SCRT1-201ENST00000569446 DNAH1Q9P2D7 4330 aa11.44□□□□□ -0.58
SCRT1-201ENST00000569446 DNHD1Q96M86 4753 aa11.43□□□□□ -0.58
SCRT1-201ENST00000569446 KRTAP1-4P0C5Y4 121 aa11.43□□□□□ -0.58
SCRT1-201ENST00000569446 DNAH11Q96DT5 4516 aa11.42□□□□□ -0.58
SCRT1-201ENST00000569446 CRIPTQ9P021 101 aa11.39□□□□□ -0.59
SCRT1-201ENST00000569446 A6NN06 94 aa11.38□□□□□ -0.59
SCRT1-201ENST00000569446 A0A0D9SG42 100 aa11.35□□□□□ -0.59
SCRT1-201ENST00000569446 K7ERS5 55 aa11.32□□□□□ -0.6
SCRT1-201ENST00000569446 KRTAP13-3Q3SY46 172 aa11.3□□□□□ -0.6
SCRT1-201ENST00000569446 Q6ZSA8 131 aa11.29□□□□□ -0.6
SCRT1-201ENST00000569446 DNAH8Q96JB1 4490 aa11.27□□□□□ -0.61
SCRT1-201ENST00000569446 SPATA8Q6RVD6 105 aa11.26□□□□□ -0.61
SCRT1-201ENST00000569446 KRTAP16-1A8MUX0 517 aa11.25□□□□□ -0.61
SCRT1-201ENST00000569446 CSAG1Q6PB30 78 aa11.24□□□□□ -0.61
SCRT1-201ENST00000569446 A0A1B0GU33 70 aa11.23□□□□□ -0.61
SCRT1-201ENST00000569446 DNAH6Q9C0G6 4158 aa11.17□□□□□ -0.62
SCRT1-201ENST00000569446 LRP1BQ9NZR2 4599 aa11.17□□□□□ -0.62
SCRT1-201ENST00000569446 DNAH17Q9UFH2 4485 aa11.15□□□□□ -0.62
SCRT1-201ENST00000569446 VPS13DQ5THJ4 4388 aa11.15□□□□□ -0.63
SCRT1-201ENST00000569446 DNAH2Q9P225 4427 aa11.07□□□□□ -0.64
SCRT1-201ENST00000569446 FAT1Q14517 4588 aa11.03□□□□□ -0.64
SCRT1-201ENST00000569446 LINC01554Q52M75 96 aa11.02□□□□□ -0.64
SCRT1-201ENST00000569446 Q5VSD8 79 aa11.02□□□□□ -0.65
SCRT1-201ENST00000569446 HECTD4Q9Y4D8 3996 aa10.99□□□□□ -0.65
SCRT1-201ENST00000569446 DYNC2H1Q8NCM8 4307 aaKnown RBP10.96□□□□□ -0.65
SCRT1-201ENST00000569446 SPINT4Q6UDR6 99 aa10.95□□□□□ -0.66
SCRT1-201ENST00000569446 DNAH5Q8TE73 4624 aa10.94□□□□□ -0.66
SCRT1-201ENST00000569446 H1FX-AS1Q4G0G2 97 aa10.92□□□□□ -0.66
SCRT1-201ENST00000569446 COX6B2Q6YFQ2 88 aa10.91□□□□□ -0.66
SCRT1-201ENST00000569446 H0YAA0 97 aa10.87□□□□□ -0.67
SCRT1-201ENST00000569446 A8MUU9 505 aa10.87□□□□□ -0.67
SCRT1-201ENST00000569446 VPS13BQ7Z7G8 4022 aa10.85□□□□□ -0.67
SCRT1-201ENST00000569446 HYDINQ4G0P3 5121 aa10.85□□□□□ -0.67
SCRT1-201ENST00000569446 C20orf166-AS1Q96NR2 134 aa10.84□□□□□ -0.67
SCRT1-201ENST00000569446 S4R3F8 94 aa10.78□□□□□ -0.68
SCRT1-201ENST00000569446 MYCBP2O75592 4640 aa10.78□□□□□ -0.68
SCRT1-201ENST00000569446 KRTAP3-1Q9BYR8 98 aa10.78□□□□□ -0.68
SCRT1-201ENST00000569446 PKHD1P08F94 4074 aa10.77□□□□□ -0.69
SCRT1-201ENST00000569446 RPS29P62273 56 aaKnown RBP10.75□□□□□ -0.69
SCRT1-201ENST00000569446 KRTAP21-3Q3LHN1 58 aa10.66□□□□□ -0.7
SCRT1-201ENST00000569446 RPL37P61927 97 aaKnown RBP10.65□□□□□ -0.7
SCRT1-201ENST00000569446 DYNC1H1Q14204 4646 aaKnown RBP10.62□□□□□ -0.71
SCRT1-201ENST00000569446 A0A1B0GVY2 172 aa10.62□□□□□ -0.71
SCRT1-201ENST00000569446 ALMS1Q8TCU4 4167 aa10.6□□□□□ -0.71
SCRT1-201ENST00000569446 XP32Q5T750 250 aa10.59□□□□□ -0.71
SCRT1-201ENST00000569446 J3QL48 77 aa10.58□□□□□ -0.72
SCRT1-201ENST00000569446 KRTAP10-8P60410 259 aa10.56□□□□□ -0.72
SCRT1-201ENST00000569446 P0C880 135 aa10.54□□□□□ -0.72
SCRT1-201ENST00000569446 LRP1Q07954 4544 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms