RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 SEC61GP60059 68 aa10.27□□□□□ -0.77
VAC14-210ENST00000568548 SPACA4Q8TDM5 124 aa10.25□□□□□ -0.77
VAC14-210ENST00000568548 H3BPC8 53 aa10.24□□□□□ -0.77
VAC14-210ENST00000568548 LIMD2Q9BT23 127 aa10.23□□□□□ -0.77
VAC14-210ENST00000568548 IGLV7-46A0A075B6I9 117 aa10.22□□□□□ -0.77
VAC14-210ENST00000568548 CIRBP-AS1Q8TBR5 109 aa10.22□□□□□ -0.77
VAC14-210ENST00000568548 A0A087WTM6 91 aa10.21□□□□□ -0.77
VAC14-210ENST00000568548 LCA10Q71F78 164 aa10.21□□□□□ -0.78
VAC14-210ENST00000568548 RTL8CO15255 209 aa10.2□□□□□ -0.78
VAC14-210ENST00000568548 WWC2-AS2Q96NR7 200 aa10.2□□□□□ -0.78
VAC14-210ENST00000568548 A0A1B0GVX0 72 aa10.2□□□□□ -0.78
VAC14-210ENST00000568548 PRR26Q8N8Z3 221 aa10.18□□□□□ -0.78
VAC14-210ENST00000568548 Q6ZR54 194 aa10.17□□□□□ -0.78
VAC14-210ENST00000568548 MRPL34Q9BQ48 92 aaKnown RBP10.17□□□□□ -0.78
VAC14-210ENST00000568548 DNAH11Q96DT5 4516 aa10.16□□□□□ -0.78
VAC14-210ENST00000568548 Q5W150 140 aa10.16□□□□□ -0.78
VAC14-210ENST00000568548 HRES1P13985 223 aa10.15□□□□□ -0.78
VAC14-210ENST00000568548 IGLV5-52A0A0A0MRZ9 124 aa10.14□□□□□ -0.79
VAC14-210ENST00000568548 LY6G6CO95867 125 aa10.14□□□□□ -0.79
VAC14-210ENST00000568548 TP53AIP1Q9HCN2 124 aa10.13□□□□□ -0.79
VAC14-210ENST00000568548 SPINK7P58062 85 aa10.12□□□□□ -0.79
VAC14-210ENST00000568548 ZNF861PO60384 105 aa10.11□□□□□ -0.79
VAC14-210ENST00000568548 C1orf134Q5TEV5 83 aa10.1□□□□□ -0.79
VAC14-210ENST00000568548 LOC101927531A0A1B0GV80 90 aa10.1□□□□□ -0.79
VAC14-210ENST00000568548 LINC00483Q53H64 154 aa10.08□□□□□ -0.8
VAC14-210ENST00000568548 Q75L30 129 aa10.08□□□□□ -0.8
VAC14-210ENST00000568548 ASB16-AS1Q495Z4 193 aa10.07□□□□□ -0.8
VAC14-210ENST00000568548 KRTAP21-3Q3LHN1 58 aa10.06□□□□□ -0.8
VAC14-210ENST00000568548 ALMS1Q8TCU4 4167 aa10.06□□□□□ -0.8
VAC14-210ENST00000568548 ZNF706Q9Y5V0 76 aaPredicted RBP10.06□□□□□ -0.8
VAC14-210ENST00000568548 LRP1BQ9NZR2 4599 aa10.04□□□□□ -0.8
VAC14-210ENST00000568548 LINC01558Q9Y6Z2 57 aa10□□□□□ -0.81
VAC14-210ENST00000568548 PLAC8Q9NZF1 115 aa9.99□□□□□ -0.81
VAC14-210ENST00000568548 IGLV7-43P04211 117 aa9.99□□□□□ -0.81
VAC14-210ENST00000568548 ATP11AUNQ6ZP68 121 aa9.98□□□□□ -0.81
VAC14-210ENST00000568548 DNAH5Q8TE73 4624 aa9.97□□□□□ -0.81
VAC14-210ENST00000568548 CDC42SE1Q9NRR8 79 aa9.97□□□□□ -0.81
VAC14-210ENST00000568548 KRTAP10-2P60368 255 aa9.96□□□□□ -0.81
VAC14-210ENST00000568548 KTN1-AS1Q86SY8 53 aa9.95□□□□□ -0.82
VAC14-210ENST00000568548 HYDINQ4G0P3 5121 aa9.94□□□□□ -0.82
VAC14-210ENST00000568548 RBM12B-AS1Q9P1G2 102 aa9.9□□□□□ -0.82
VAC14-210ENST00000568548 A6NN06 94 aa9.9□□□□□ -0.82
VAC14-210ENST00000568548 FAT2Q9NYQ8 4349 aa9.89□□□□□ -0.83
VAC14-210ENST00000568548 IGKV2D-30A0A075B6S6 120 aa9.89□□□□□ -0.83
VAC14-210ENST00000568548 IGKV2-30P06310 120 aa9.89□□□□□ -0.83
VAC14-210ENST00000568548 VPS13BQ7Z7G8 4022 aa9.89□□□□□ -0.83
VAC14-210ENST00000568548 LINC00313P59037 77 aa9.89□□□□□ -0.83
VAC14-210ENST00000568548 ACYP2P14621 99 aa9.87□□□□□ -0.83
VAC14-210ENST00000568548 KRTAP13-3Q3SY46 172 aa9.86□□□□□ -0.83
VAC14-210ENST00000568548 KRTAP13-2Q52LG2 175 aa9.84□□□□□ -0.83
VAC14-210ENST00000568548 PRAC1Q96KF2 57 aa9.84□□□□□ -0.83
VAC14-210ENST00000568548 PKD1P98161 4303 aa9.83□□□□□ -0.84
VAC14-210ENST00000568548 SPINK1P00995 79 aa9.82□□□□□ -0.84
VAC14-210ENST00000568548 A0A1B0GU69 56 aa9.8□□□□□ -0.84
VAC14-210ENST00000568548 ADM2Q7Z4H4 148 aa9.8□□□□□ -0.84
VAC14-210ENST00000568548 PKHD1P08F94 4074 aa9.79□□□□□ -0.84
VAC14-210ENST00000568548 KRTAP10-1P60331 282 aa9.78□□□□□ -0.84
VAC14-210ENST00000568548 C7orf65Q6ZTY9 151 aa9.76□□□□□ -0.85
VAC14-210ENST00000568548 SSBP3-AS1Q7Z2R9 100 aa9.75□□□□□ -0.85
VAC14-210ENST00000568548 FAM229AH3BQW9 127 aa9.74□□□□□ -0.85
VAC14-210ENST00000568548 C8orf87E5RJ46 101 aa9.72□□□□□ -0.85
VAC14-210ENST00000568548 DMAC1Q96GE9 116 aa9.72□□□□□ -0.85
VAC14-210ENST00000568548 Q6ZSA8 131 aa9.72□□□□□ -0.85
VAC14-210ENST00000568548 SACSQ9NZJ4 4579 aa9.72□□□□□ -0.85
VAC14-210ENST00000568548 Q8N1X5 172 aa9.7□□□□□ -0.86
VAC14-210ENST00000568548 PLA2G1BP04054 148 aaKnown RBP9.67□□□□□ -0.86
VAC14-210ENST00000568548 FAT1Q14517 4588 aa9.65□□□□□ -0.87
VAC14-210ENST00000568548 C4orf48Q5BLP8 95 aa9.64□□□□□ -0.87
VAC14-210ENST00000568548 KRTAP16-1A8MUX0 517 aa9.63□□□□□ -0.87
VAC14-210ENST00000568548 KRTAP1-4P0C5Y4 121 aa9.62□□□□□ -0.87
VAC14-210ENST00000568548 MIR22HGQ0VDD5 57 aa9.62□□□□□ -0.87
VAC14-210ENST00000568548 SMR3BP02814 79 aaPredicted RBP9.61□□□□□ -0.87
VAC14-210ENST00000568548 TYMSOSQ8TAI1 123 aa9.59□□□□□ -0.87
VAC14-210ENST00000568548 FLG2Q5D862 2391 aaPredicted RBP9.57□□□□□ -0.88
VAC14-210ENST00000568548 C9orf92A6NGG3 77 aa9.56□□□□□ -0.88
VAC14-210ENST00000568548 UQCR11O14957 56 aa9.56□□□□□ -0.88
VAC14-210ENST00000568548 SPATA8Q6RVD6 105 aa9.49□□□□□ -0.89
VAC14-210ENST00000568548 DYNC1H1Q14204 4646 aaKnown RBP9.49□□□□□ -0.89
VAC14-210ENST00000568548 KMT2CQ8NEZ4 4911 aaKnown RBP9.46□□□□□ -0.9
VAC14-210ENST00000568548 RYR2Q92736 4967 aa9.46□□□□□ -0.9
VAC14-210ENST00000568548 DMBT1Q9UGM3 2413 aaPredicted RBP9.45□□□□□ -0.9
VAC14-210ENST00000568548 A0A1B0GVY2 172 aa9.44□□□□□ -0.9
VAC14-210ENST00000568548 CSAG1Q6PB30 78 aa9.41□□□□□ -0.9
VAC14-210ENST00000568548 LINC00304Q8N9R0 145 aa9.39□□□□□ -0.91
VAC14-210ENST00000568548 APOBP04114 4563 aaKnown RBP9.36□□□□□ -0.91
VAC14-210ENST00000568548 MYCBP2O75592 4640 aa9.36□□□□□ -0.91
VAC14-210ENST00000568548 LINC01554Q52M75 96 aa9.32□□□□□ -0.92
VAC14-210ENST00000568548 CRIPTQ9P021 101 aa9.29□□□□□ -0.92
VAC14-210ENST00000568548 LRP1Q07954 4544 aaKnown RBP9.29□□□□□ -0.92
VAC14-210ENST00000568548 KRTAP3-1Q9BYR8 98 aa9.25□□□□□ -0.93
VAC14-210ENST00000568548 H0YAA0 97 aa9.25□□□□□ -0.93
VAC14-210ENST00000568548 KRTAP10-4P60372 401 aaPredicted RBP9.25□□□□□ -0.93
VAC14-210ENST00000568548 RYR3Q15413 4870 aa9.19□□□□□ -0.94
VAC14-210ENST00000568548 A0A1B0GU33 70 aa9.18□□□□□ -0.94
VAC14-210ENST00000568548 HSPG2P98160 4391 aa9.16□□□□□ -0.94
VAC14-210ENST00000568548 PKHD1L1Q86WI1 4243 aa9.14□□□□□ -0.95
VAC14-210ENST00000568548 RPS29P62273 56 aaKnown RBP9.11□□□□□ -0.95
VAC14-210ENST00000568548 A8MUU9 505 aa9.08□□□□□ -0.96
VAC14-210ENST00000568548 H1FX-AS1Q4G0G2 97 aa9.08□□□□□ -0.96
VAC14-210ENST00000568548 C20orf166-AS1Q96NR2 134 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms