RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 S4R3F8 94 aa1.56□□□□□ -2.16
CRNDE-208ENST00000560029 REV3LO60673 3130 aa1.56□□□□□ -2.16
CRNDE-208ENST00000560029 AKAP13Q12802 2813 aa1.56□□□□□ -2.16
CRNDE-208ENST00000560029 ACACAQ13085 2346 aa1.55□□□□□ -2.16
CRNDE-208ENST00000560029 LAMA1P25391 3075 aa1.55□□□□□ -2.16
CRNDE-208ENST00000560029 LAMA2P24043 3122 aaKnown RBP1.55□□□□□ -2.16
CRNDE-208ENST00000560029 DMDP11532 3685 aa1.55□□□□□ -2.16
CRNDE-208ENST00000560029 FREM2Q5SZK8 3169 aa1.55□□□□□ -2.16
CRNDE-208ENST00000560029 NCOR1O75376 2440 aa1.55□□□□□ -2.16
CRNDE-208ENST00000560029 ZFHX4Q86UP3 3567 aa1.54□□□□□ -2.16
CRNDE-208ENST00000560029 DMXL2Q8TDJ6 3036 aa1.54□□□□□ -2.16
CRNDE-208ENST00000560029 PRUNE2Q8WUY3 3088 aa1.54□□□□□ -2.16
CRNDE-208ENST00000560029 DSPP15924 2871 aaKnown RBP1.54□□□□□ -2.16
CRNDE-208ENST00000560029 TENM2Q9NT68 2774 aa1.53□□□□□ -2.16
CRNDE-208ENST00000560029 MAP1AP78559 2803 aaPredicted RBP1.53□□□□□ -2.16
CRNDE-208ENST00000560029 VCANP13611 3396 aa1.53□□□□□ -2.17
CRNDE-208ENST00000560029 CDH23Q9H251 3354 aa1.53□□□□□ -2.17
CRNDE-208ENST00000560029 HRNRQ86YZ3 2850 aaPredicted RBP1.53□□□□□ -2.17
CRNDE-208ENST00000560029 NCOR2Q9Y618 2525 aa1.52□□□□□ -2.17
CRNDE-208ENST00000560029 C2CD3Q4AC94 2353 aa1.52□□□□□ -2.17
CRNDE-208ENST00000560029 SPTBN4Q9H254 2564 aa1.52□□□□□ -2.17
CRNDE-208ENST00000560029 CSMD1Q96PZ7 3565 aa1.52□□□□□ -2.17
CRNDE-208ENST00000560029 SPTA1P02549 2419 aa1.51□□□□□ -2.17
CRNDE-208ENST00000560029 NBASA2RRP1 2371 aa1.51□□□□□ -2.17
CRNDE-208ENST00000560029 ZDBF2Q9HCK1 2354 aa1.51□□□□□ -2.17
CRNDE-208ENST00000560029 PRRC2CQ9Y520 2896 aaKnown RBP1.51□□□□□ -2.17
CRNDE-208ENST00000560029 CEP290O15078 2479 aa1.5□□□□□ -2.17
CRNDE-208ENST00000560029 SPEGQ15772 3267 aa1.5□□□□□ -2.17
CRNDE-208ENST00000560029 TENM1Q9UKZ4 2725 aa1.5□□□□□ -2.17
CRNDE-208ENST00000560029 TACC2O95359 2948 aa1.5□□□□□ -2.17
CRNDE-208ENST00000560029 IGF2RP11717 2491 aa1.5□□□□□ -2.17
CRNDE-208ENST00000560029 SPTAN1Q13813 2472 aaKnown RBP1.5□□□□□ -2.17
CRNDE-208ENST00000560029 SPG11Q96JI7 2443 aa1.5□□□□□ -2.17
CRNDE-208ENST00000560029 C9orf92A6NGG3 77 aa1.49□□□□□ -2.17
CRNDE-208ENST00000560029 BOD1L1Q8NFC6 3051 aa1.49□□□□□ -2.17
CRNDE-208ENST00000560029 LRBAP50851 2863 aa1.49□□□□□ -2.17
CRNDE-208ENST00000560029 CELSR3Q9NYQ7 3312 aa1.48□□□□□ -2.17
CRNDE-208ENST00000560029 ANKRD17O75179 2603 aaKnown RBP1.48□□□□□ -2.17
CRNDE-208ENST00000560029 CSPG4Q6UVK1 2322 aa1.48□□□□□ -2.17
CRNDE-208ENST00000560029 M0QZ58 72 aa1.48□□□□□ -2.17
CRNDE-208ENST00000560029 RPS29P62273 56 aaKnown RBP1.48□□□□□ -2.17
CRNDE-208ENST00000560029 DCHS2Q6V1P9 2916 aa1.48□□□□□ -2.17
CRNDE-208ENST00000560029 ITPR1Q14643 2758 aa1.47□□□□□ -2.17
CRNDE-208ENST00000560029 FN1P02751 2386 aaKnown RBP1.47□□□□□ -2.17
CRNDE-208ENST00000560029 INE1O15225 51 aa1.47□□□□□ -2.17
CRNDE-208ENST00000560029 CELSR2Q9HCU4 2923 aa1.47□□□□□ -2.17
CRNDE-208ENST00000560029 SMG1Q96Q15 3661 aaKnown RBP1.47□□□□□ -2.17
CRNDE-208ENST00000560029 CREBBPQ92793 2442 aa1.46□□□□□ -2.18
CRNDE-208ENST00000560029 MYO15AQ9UKN7 3530 aa1.46□□□□□ -2.18
CRNDE-208ENST00000560029 SPENQ96T58 3664 aaKnown RBP1.46□□□□□ -2.18
CRNDE-208ENST00000560029 SETXQ7Z333 2677 aaKnown RBP1.46□□□□□ -2.18
CRNDE-208ENST00000560029 CELSR1Q9NYQ6 3014 aa1.46□□□□□ -2.18
CRNDE-208ENST00000560029 ASH1LQ9NR48 2969 aaKnown RBP1.44□□□□□ -2.18
CRNDE-208ENST00000560029 SMR3AQ99954 134 aa1.44□□□□□ -2.18
CRNDE-208ENST00000560029 FLG2Q5D862 2391 aaPredicted RBP1.44□□□□□ -2.18
CRNDE-208ENST00000560029 TLN2Q9Y4G6 2542 aa1.43□□□□□ -2.18
CRNDE-208ENST00000560029 AKAP9Q99996 3911 aa1.43□□□□□ -2.18
CRNDE-208ENST00000560029 LOC400499M0QZD8 3231 aa1.43□□□□□ -2.18
CRNDE-208ENST00000560029 ANKRD11Q6UB99 2663 aaPredicted RBP1.43□□□□□ -2.18
CRNDE-208ENST00000560029 TLN1Q9Y490 2541 aaKnown RBP1.43□□□□□ -2.18
CRNDE-208ENST00000560029 TEX15Q9BXT5 2789 aa1.42□□□□□ -2.18
CRNDE-208ENST00000560029 OTOGQ6ZRI0 2925 aa1.42□□□□□ -2.18
CRNDE-208ENST00000560029 GVINP1Q7Z2Y8 2422 aa1.42□□□□□ -2.18
CRNDE-208ENST00000560029 COL12A1Q99715 3063 aa1.42□□□□□ -2.18
CRNDE-208ENST00000560029 JMJD1CQ15652 2540 aa1.41□□□□□ -2.18
CRNDE-208ENST00000560029 PTPN13Q12923 2485 aa1.41□□□□□ -2.18
CRNDE-208ENST00000560029 HIVEP3Q5T1R4 2406 aa1.41□□□□□ -2.18
CRNDE-208ENST00000560029 ASPMQ8IZT6 3477 aa1.41□□□□□ -2.18
CRNDE-208ENST00000560029 ADGRG4Q8IZF6 3080 aa1.41□□□□□ -2.18
CRNDE-208ENST00000560029 ATMQ13315 3056 aa1.4□□□□□ -2.19
CRNDE-208ENST00000560029 UTP20O75691 2785 aaKnown RBP1.4□□□□□ -2.19
CRNDE-208ENST00000560029 GCN1Q92616 2671 aaKnown RBP1.4□□□□□ -2.19
CRNDE-208ENST00000560029 DMXL1Q9Y485 3027 aa1.4□□□□□ -2.19
CRNDE-208ENST00000560029 USP9XQ93008 2570 aaPredicted RBP1.4□□□□□ -2.19
CRNDE-208ENST00000560029 F8P00451 2351 aa1.39□□□□□ -2.19
CRNDE-208ENST00000560029 APCP25054 2843 aa1.39□□□□□ -2.19
CRNDE-208ENST00000560029 ZFHX2Q9C0A1 2572 aaPredicted RBP1.39□□□□□ -2.19
CRNDE-208ENST00000560029 CCDC168Q8NDH2 2452 aa1.39□□□□□ -2.19
CRNDE-208ENST00000560029 CEP295Q9C0D2 2601 aa1.38□□□□□ -2.19
CRNDE-208ENST00000560029 ZNF462Q96JM2 2506 aa1.38□□□□□ -2.19
CRNDE-208ENST00000560029 DNAH1Q9P2D7 4330 aa1.37□□□□□ -2.19
CRNDE-208ENST00000560029 DOPEY1Q5JWR5 2465 aa1.37□□□□□ -2.19
CRNDE-208ENST00000560029 KRTAP10-4P60372 401 aaPredicted RBP1.37□□□□□ -2.19
CRNDE-208ENST00000560029 LAMA5O15230 3695 aa1.36□□□□□ -2.19
CRNDE-208ENST00000560029 PIEZO1Q92508 2521 aa1.36□□□□□ -2.19
CRNDE-208ENST00000560029 NBEAL2Q6ZNJ1 2754 aa1.36□□□□□ -2.19
CRNDE-208ENST00000560029 SVEP1Q4LDE5 3571 aa1.36□□□□□ -2.19
CRNDE-208ENST00000560029 CRYBG3Q68DQ2 2970 aa1.36□□□□□ -2.19
CRNDE-208ENST00000560029 NF1P21359 2839 aa1.36□□□□□ -2.19
CRNDE-208ENST00000560029 RELNP78509 3460 aa1.36□□□□□ -2.19
CRNDE-208ENST00000560029 HECTD1Q9ULT8 2610 aa1.36□□□□□ -2.19
CRNDE-208ENST00000560029 NAV2Q8IVL1 2488 aa1.35□□□□□ -2.19
CRNDE-208ENST00000560029 BSNQ9UPA5 3926 aa1.35□□□□□ -2.19
CRNDE-208ENST00000560029 NBPF19A0A087WUL8 3843 aa1.35□□□□□ -2.19
CRNDE-208ENST00000560029 TENM4Q6N022 2769 aa1.35□□□□□ -2.19
CRNDE-208ENST00000560029 UNC79Q9P2D8 2635 aa1.35□□□□□ -2.19
CRNDE-208ENST00000560029 TNP1P09430 55 aa1.35□□□□□ -2.19
CRNDE-208ENST00000560029 Q5VSD8 79 aa1.35□□□□□ -2.19
CRNDE-208ENST00000560029 EYSQ5T1H1 3165 aa1.35□□□□□ -2.19
CRNDE-208ENST00000560029 MYO9AB2RTY4 2548 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms