RNA–Protein interactions for RNA: ENST00000556221.1

PSMA6-213, Transcript of proteasome subunit alpha 6, humanhuman

TSL 3

Gene PSMA6, Length 423 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-213ENST00000556221 KRTAP19-8Q3LI54 63 aa-0.22□□□□□ -2.44
PSMA6-213ENST00000556221 S100ZQ8WXG8 99 aa-0.22□□□□□ -2.44
PSMA6-213ENST00000556221 NMES1Q9C002 83 aa-0.22□□□□□ -2.44
PSMA6-213ENST00000556221 CEP290O15078 2479 aa-0.22□□□□□ -2.44
PSMA6-213ENST00000556221 LRRK2Q5S007 2527 aa-0.23□□□□□ -2.45
PSMA6-213ENST00000556221 ABCA9Q8IUA7 1624 aa-0.23□□□□□ -2.45
PSMA6-213ENST00000556221 NRAPQ86VF7 1730 aa-0.23□□□□□ -2.45
PSMA6-213ENST00000556221 DEFB110Q30KQ9 67 aa-0.23□□□□□ -2.45
PSMA6-213ENST00000556221 LAMA1P25391 3075 aa-0.23□□□□□ -2.45
PSMA6-213ENST00000556221 TEP1Q99973 2627 aaKnown RBP-0.23□□□□□ -2.45
PSMA6-213ENST00000556221 RNF17Q9BXT8 1623 aaKnown RBP-0.24□□□□□ -2.45
PSMA6-213ENST00000556221 ZC3H13Q5T200 1668 aaKnown RBP-0.24□□□□□ -2.45
PSMA6-213ENST00000556221 PKD1P98161 4303 aa-0.24□□□□□ -2.45
PSMA6-213ENST00000556221 WDR87Q6ZQQ6 2873 aa-0.24□□□□□ -2.45
PSMA6-213ENST00000556221 IGLV5-48A0A075B6I7 105 aa-0.24□□□□□ -2.45
PSMA6-213ENST00000556221 SMIM31A0A1B0GVY4 71 aa-0.24□□□□□ -2.45
PSMA6-213ENST00000556221 SERF2P84101 59 aa-0.24□□□□□ -2.45
PSMA6-213ENST00000556221 SPRR2FQ96RM1 72 aa-0.24□□□□□ -2.45
PSMA6-213ENST00000556221 THOC2Q8NI27 1593 aaKnown RBP-0.24□□□□□ -2.45
PSMA6-213ENST00000556221 INO80Q9ULG1 1556 aaPredicted RBP-0.24□□□□□ -2.45
PSMA6-213ENST00000556221 MADDQ8WXG6 1647 aa-0.24□□□□□ -2.45
PSMA6-213ENST00000556221 PKHD1P08F94 4074 aa-0.24□□□□□ -2.45
PSMA6-213ENST00000556221 LAMA5O15230 3695 aa-0.25□□□□□ -2.45
PSMA6-213ENST00000556221 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.25□□□□□ -2.45
PSMA6-213ENST00000556221 MYO18BQ8IUG5 2567 aa-0.25□□□□□ -2.45
PSMA6-213ENST00000556221 NBEAL2Q6ZNJ1 2754 aa-0.25□□□□□ -2.45
PSMA6-213ENST00000556221 DNAH9Q9NYC9 4486 aa-0.25□□□□□ -2.45
PSMA6-213ENST00000556221 PARP4Q9UKK3 1724 aaKnown RBP-0.26□□□□□ -2.45
PSMA6-213ENST00000556221 NHSQ6T4R5 1651 aa-0.26□□□□□ -2.45
PSMA6-213ENST00000556221 EFCAB5A4FU69 1503 aa-0.26□□□□□ -2.45
PSMA6-213ENST00000556221 KRTAP20-2Q3LI61 65 aa-0.26□□□□□ -2.45
PSMA6-213ENST00000556221 HERC1Q15751 4861 aa-0.27□□□□□ -2.45
PSMA6-213ENST00000556221 MMP24-AS1A0A0U1RRL7 71 aa-0.27□□□□□ -2.45
PSMA6-213ENST00000556221 IGIPA6NJ69 53 aa-0.27□□□□□ -2.45
PSMA6-213ENST00000556221 SMIM5Q71RC9 77 aa-0.27□□□□□ -2.45
PSMA6-213ENST00000556221 LINC00308Q8TCZ7 52 aa-0.27□□□□□ -2.45
PSMA6-213ENST00000556221 RYR3Q15413 4870 aa-0.27□□□□□ -2.45
PSMA6-213ENST00000556221 TRIOO75962 3097 aa-0.27□□□□□ -2.45
PSMA6-213ENST00000556221 HERC2O95714 4834 aa-0.27□□□□□ -2.45
PSMA6-213ENST00000556221 ACACAQ13085 2346 aa-0.28□□□□□ -2.45
PSMA6-213ENST00000556221 NOP10Q9NPE3 64 aaKnown RBP-0.28□□□□□ -2.45
PSMA6-213ENST00000556221 NBPF19A0A087WUL8 3843 aa-0.28□□□□□ -2.45
PSMA6-213ENST00000556221 CCDC168Q8NDH2 2452 aa-0.28□□□□□ -2.45
PSMA6-213ENST00000556221 FAT3Q8TDW7 4589 aa-0.29□□□□□ -2.46
PSMA6-213ENST00000556221 ANKRD36CQ5JPF3 1778 aa-0.29□□□□□ -2.46
PSMA6-213ENST00000556221 MGAM2Q2M2H8 2515 aa-0.29□□□□□ -2.46
PSMA6-213ENST00000556221 AKAP9Q99996 3911 aa-0.29□□□□□ -2.46
PSMA6-213ENST00000556221 MT4P47944 62 aa-0.29□□□□□ -2.46
PSMA6-213ENST00000556221 TMEM167BQ9NRX6 74 aa-0.29□□□□□ -2.46
PSMA6-213ENST00000556221 ABRACLQ9P1F3 81 aa-0.29□□□□□ -2.46
PSMA6-213ENST00000556221 ITPR3Q14573 2671 aa-0.3□□□□□ -2.46
PSMA6-213ENST00000556221 KIF1AQ12756 1690 aa-0.3□□□□□ -2.46
PSMA6-213ENST00000556221 ITSN2Q9NZM3 1697 aa-0.3□□□□□ -2.46
PSMA6-213ENST00000556221 KAAG1Q9UBP8 84 aa-0.3□□□□□ -2.46
PSMA6-213ENST00000556221 KIAA1109Q2LD37 5005 aa-0.3□□□□□ -2.46
PSMA6-213ENST00000556221 UBR4Q5T4S7 5183 aa-0.3□□□□□ -2.46
PSMA6-213ENST00000556221 TOGARAM1Q9Y4F4 1720 aa-0.3□□□□□ -2.46
PSMA6-213ENST00000556221 VPS13DQ5THJ4 4388 aa-0.3□□□□□ -2.46
PSMA6-213ENST00000556221 EEA1Q15075 1411 aa-0.3□□□□□ -2.46
PSMA6-213ENST00000556221 FAM186AA6NE01 2351 aa-0.31□□□□□ -2.46
PSMA6-213ENST00000556221 RANBP2P49792 3224 aaKnown RBP-0.31□□□□□ -2.46
PSMA6-213ENST00000556221 SMIM27A0A1W2PRY6 76 aa-0.31□□□□□ -2.46
PSMA6-213ENST00000556221 H0YGX0 51 aa-0.31□□□□□ -2.46
PSMA6-213ENST00000556221 USH2AO75445 5202 aa-0.31□□□□□ -2.46
PSMA6-213ENST00000556221 STARD9Q9P2P6 4700 aa-0.31□□□□□ -2.46
PSMA6-213ENST00000556221 MROH1Q8NDA8 1641 aa-0.31□□□□□ -2.46
PSMA6-213ENST00000556221 DNAH6Q9C0G6 4158 aa-0.31□□□□□ -2.46
PSMA6-213ENST00000556221 C3P01024 1663 aa-0.32□□□□□ -2.46
PSMA6-213ENST00000556221 RYR1P21817 5038 aa-0.32□□□□□ -2.46
PSMA6-213ENST00000556221 TNP1P09430 55 aa-0.32□□□□□ -2.46
PSMA6-213ENST00000556221 FAT1Q14517 4588 aa-0.32□□□□□ -2.46
PSMA6-213ENST00000556221 USP9YO00507 2555 aaPredicted RBP-0.32□□□□□ -2.46
PSMA6-213ENST00000556221 HYDINQ4G0P3 5121 aa-0.32□□□□□ -2.46
PSMA6-213ENST00000556221 ACACBO00763 2458 aa-0.32□□□□□ -2.46
PSMA6-213ENST00000556221 RIF1Q5UIP0 2472 aaKnown RBP-0.32□□□□□ -2.46
PSMA6-213ENST00000556221 APOBP04114 4563 aaKnown RBP-0.33□□□□□ -2.46
PSMA6-213ENST00000556221 CLASP1Q7Z460 1538 aa-0.33□□□□□ -2.46
PSMA6-213ENST00000556221 CPS1P31327 1500 aa-0.33□□□□□ -2.46
PSMA6-213ENST00000556221 ANK3Q12955 4377 aaKnown RBP-0.34□□□□□ -2.46
PSMA6-213ENST00000556221 ABCA6Q8N139 1617 aa-0.34□□□□□ -2.46
PSMA6-213ENST00000556221 A0A0C4DFX4 3053 aa-0.34□□□□□ -2.46
PSMA6-213ENST00000556221 GLI2P10070 1586 aa-0.34□□□□□ -2.46
PSMA6-213ENST00000556221 WFDC10BQ8IUB3 73 aa-0.34□□□□□ -2.46
PSMA6-213ENST00000556221 COL12A1Q99715 3063 aa-0.34□□□□□ -2.46
PSMA6-213ENST00000556221 VPS13BQ7Z7G8 4022 aa-0.35□□□□□ -2.46
PSMA6-213ENST00000556221 SACSQ9NZJ4 4579 aa-0.35□□□□□ -2.47
PSMA6-213ENST00000556221 PKHD1L1Q86WI1 4243 aa-0.36□□□□□ -2.47
PSMA6-213ENST00000556221 RNF213Q63HN8 5207 aa-0.36□□□□□ -2.47
PSMA6-213ENST00000556221 NIPBLQ6KC79 2804 aaeCLIP-0.36□□□□□ -2.47
PSMA6-213ENST00000556221 M0QY20 66 aa-0.36□□□□□ -2.47
PSMA6-213ENST00000556221 CLPSL2Q6UWE3 100 aa-0.36□□□□□ -2.47
PSMA6-213ENST00000556221 TIAM1Q13009 1591 aa-0.36□□□□□ -2.47
PSMA6-213ENST00000556221 UGGT1Q9NYU2 1555 aa-0.36□□□□□ -2.47
PSMA6-213ENST00000556221 DNAH11Q96DT5 4516 aa-0.37□□□□□ -2.47
PSMA6-213ENST00000556221 DEFB1P60022 68 aa-0.37□□□□□ -2.47
PSMA6-213ENST00000556221 EPPK1P58107 5090 aaKnown RBP-0.37□□□□□ -2.47
PSMA6-213ENST00000556221 RYR2Q92736 4967 aa-0.37□□□□□ -2.47
PSMA6-213ENST00000556221 USP9XQ93008 2570 aaPredicted RBP-0.38□□□□□ -2.47
PSMA6-213ENST00000556221 DNAH3Q8TD57 4116 aa-0.38□□□□□ -2.47
PSMA6-213ENST00000556221 M0QZ58 72 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms