RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, humanhuman

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-223ENST00000555573 EPPK1P58107 5090 aaKnown RBP0.18□□□□□ -2.38
KTN1-223ENST00000555573 MAP1AP78559 2803 aaPredicted RBP0.18□□□□□ -2.38
KTN1-223ENST00000555573 EEA1Q15075 1411 aa0.18□□□□□ -2.38
KTN1-223ENST00000555573 PRLHP81277 87 aa0.18□□□□□ -2.38
KTN1-223ENST00000555573 HYDINQ4G0P3 5121 aa0.17□□□□□ -2.38
KTN1-223ENST00000555573 PREX2Q70Z35 1606 aa0.17□□□□□ -2.38
KTN1-223ENST00000555573 CLASP1Q7Z460 1538 aa0.17□□□□□ -2.38
KTN1-223ENST00000555573 STAB2Q8WWQ8 2551 aa0.17□□□□□ -2.38
KTN1-223ENST00000555573 ZZEF1O43149 2961 aa0.17□□□□□ -2.38
KTN1-223ENST00000555573 NF1P21359 2839 aa0.17□□□□□ -2.38
KTN1-223ENST00000555573 RPS27P42677 84 aaKnown RBP0.17□□□□□ -2.38
KTN1-223ENST00000555573 RPS27LQ71UM5 84 aaKnown RBP0.17□□□□□ -2.38
KTN1-223ENST00000555573 CEP290O15078 2479 aa0.17□□□□□ -2.38
KTN1-223ENST00000555573 COL6A5A8TX70 2615 aa0.17□□□□□ -2.38
KTN1-223ENST00000555573 S4R3F8 94 aa0.16□□□□□ -2.38
KTN1-223ENST00000555573 WT1-ASQ06250 92 aa0.16□□□□□ -2.38
KTN1-223ENST00000555573 SYCP2Q9BX26 1530 aa0.15□□□□□ -2.38
KTN1-223ENST00000555573 SPRR2GQ9BYE4 73 aa0.15□□□□□ -2.39
KTN1-223ENST00000555573 A0A1B0GUL6 1792 aa0.14□□□□□ -2.39
KTN1-223ENST00000555573 PDZD2O15018 2839 aa0.12□□□□□ -2.39
KTN1-223ENST00000555573 IGIPA6NJ69 53 aa0.12□□□□□ -2.39
KTN1-223ENST00000555573 DMXL1Q9Y485 3027 aa0.12□□□□□ -2.39
KTN1-223ENST00000555573 ZANQ9Y493 2812 aa0.11□□□□□ -2.39
KTN1-223ENST00000555573 HTTP42858 3142 aa0.11□□□□□ -2.39
KTN1-223ENST00000555573 LRP1BQ9NZR2 4599 aa0.11□□□□□ -2.39
KTN1-223ENST00000555573 H3BNG1 76 aa0.1□□□□□ -2.39
KTN1-223ENST00000555573 LRP2P98164 4655 aa0.1□□□□□ -2.39
KTN1-223ENST00000555573 VPS13BQ7Z7G8 4022 aa0.1□□□□□ -2.39
KTN1-223ENST00000555573 SVEP1Q4LDE5 3571 aa0.09□□□□□ -2.39
KTN1-223ENST00000555573 PKHD1P08F94 4074 aa0.09□□□□□ -2.39
KTN1-223ENST00000555573 PKD1P98161 4303 aa0.09□□□□□ -2.39
KTN1-223ENST00000555573 CUBNO60494 3623 aa0.09□□□□□ -2.39
KTN1-223ENST00000555573 HIVEP1P15822 2718 aa0.09□□□□□ -2.4
KTN1-223ENST00000555573 KALRNO60229 2985 aa0.09□□□□□ -2.4
KTN1-223ENST00000555573 SETD2Q9BYW2 2564 aaPredicted RBP0.08□□□□□ -2.4
KTN1-223ENST00000555573 H3BUA1 57 aa0.08□□□□□ -2.4
KTN1-223ENST00000555573 TMEM167BQ9NRX6 74 aa0.08□□□□□ -2.4
KTN1-223ENST00000555573 TIMM8BQ9Y5J9 83 aaPredicted RBP0.08□□□□□ -2.4
KTN1-223ENST00000555573 C9orf92A6NGG3 77 aa0.07□□□□□ -2.4
KTN1-223ENST00000555573 SPRR2AP35326 72 aa0.07□□□□□ -2.4
KTN1-223ENST00000555573 EFCAB6Q5THR3 1501 aa0.07□□□□□ -2.4
KTN1-223ENST00000555573 KRTAP6-2Q3LI66 62 aa0.07□□□□□ -2.4
KTN1-223ENST00000555573 RIF1Q5UIP0 2472 aaKnown RBP0.06□□□□□ -2.4
KTN1-223ENST00000555573 TGP01266 2768 aa0.06□□□□□ -2.4
KTN1-223ENST00000555573 ADCY10Q96PN6 1610 aa0.06□□□□□ -2.4
KTN1-223ENST00000555573 GCN1Q92616 2671 aaKnown RBP0.06□□□□□ -2.4
KTN1-223ENST00000555573 LINC00308Q8TCZ7 52 aa0.06□□□□□ -2.4
KTN1-223ENST00000555573 USH2AO75445 5202 aa0.06□□□□□ -2.4
KTN1-223ENST00000555573 AGLP35573 1532 aa0.06□□□□□ -2.4
KTN1-223ENST00000555573 SPG11Q96JI7 2443 aa0.05□□□□□ -2.4
KTN1-223ENST00000555573 ABCA5Q8WWZ7 1642 aa0.05□□□□□ -2.4
KTN1-223ENST00000555573 NRXN3Q9Y4C0 1643 aa0.05□□□□□ -2.4
KTN1-223ENST00000555573 FLGP20930 4061 aaPredicted RBP0.04□□□□□ -2.4
KTN1-223ENST00000555573 TACC2O95359 2948 aa0.04□□□□□ -2.4
KTN1-223ENST00000555573 LMO7Q8WWI1 1683 aa0.04□□□□□ -2.4
KTN1-223ENST00000555573 NBEAL1Q6ZS30 2694 aa0.03□□□□□ -2.4
KTN1-223ENST00000555573 H0YGX0 51 aa0.03□□□□□ -2.4
KTN1-223ENST00000555573 FANCD2Q9BXW9 1451 aa0.02□□□□□ -2.41
KTN1-223ENST00000555573 FASNP49327 2511 aaKnown RBP0.02□□□□□ -2.41
KTN1-223ENST00000555573 ABCC8Q09428 1581 aa0.02□□□□□ -2.41
KTN1-223ENST00000555573 MTORP42345 2549 aa0.01□□□□□ -2.41
KTN1-223ENST00000555573 PLNP26678 52 aa0.01□□□□□ -2.41
KTN1-223ENST00000555573 ABRACLQ9P1F3 81 aa0.01□□□□□ -2.41
KTN1-223ENST00000555573 FAT3Q8TDW7 4589 aa0.01□□□□□ -2.41
KTN1-223ENST00000555573 IGLV5-48A0A075B6I7 105 aa0□□□□□ -2.41
KTN1-223ENST00000555573 NOP10Q9NPE3 64 aaKnown RBP0□□□□□ -2.41
KTN1-223ENST00000555573 FAM208AQ9UK61 1670 aaKnown RBP0□□□□□ -2.41
KTN1-223ENST00000555573 AKAP9Q99996 3911 aa-0□□□□□ -2.41
KTN1-223ENST00000555573 LRRK2Q5S007 2527 aa-0□□□□□ -2.41
KTN1-223ENST00000555573 RANBP2P49792 3224 aaKnown RBP-0.01□□□□□ -2.41
KTN1-223ENST00000555573 SRRM2Q9UQ35 2752 aaKnown RBP-0.01□□□□□ -2.41
KTN1-223ENST00000555573 DNAH3Q8TD57 4116 aa-0.01□□□□□ -2.41
KTN1-223ENST00000555573 SPRR2EP22531 72 aa-0.01□□□□□ -2.41
KTN1-223ENST00000555573 KIF21BO75037 1637 aa-0.02□□□□□ -2.41
KTN1-223ENST00000555573 ANKRD11Q6UB99 2663 aaPredicted RBP-0.02□□□□□ -2.41
KTN1-223ENST00000555573 EPG5Q9HCE0 2579 aa-0.02□□□□□ -2.41
KTN1-223ENST00000555573 UTP20O75691 2785 aaKnown RBP-0.02□□□□□ -2.41
KTN1-223ENST00000555573 DDX60Q8IY21 1712 aaKnown RBP-0.02□□□□□ -2.41
KTN1-223ENST00000555573 DNAH9Q9NYC9 4486 aa-0.02□□□□□ -2.41
KTN1-223ENST00000555573 IQGAP1P46940 1657 aa-0.03□□□□□ -2.41
KTN1-223ENST00000555573 KAAG1Q9UBP8 84 aa-0.03□□□□□ -2.41
KTN1-223ENST00000555573 PKHD1L1Q86WI1 4243 aa-0.03□□□□□ -2.41
KTN1-223ENST00000555573 DOPEY1Q5JWR5 2465 aa-0.03□□□□□ -2.41
KTN1-223ENST00000555573 KRTAP6-1Q3LI64 71 aa-0.04□□□□□ -2.42
KTN1-223ENST00000555573 SMIM27A0A1W2PRY6 76 aa-0.04□□□□□ -2.42
KTN1-223ENST00000555573 DEFB110Q30KQ9 67 aa-0.04□□□□□ -2.42
KTN1-223ENST00000555573 CMC2Q9NRP2 79 aa-0.04□□□□□ -2.42
KTN1-223ENST00000555573 ANK3Q12955 4377 aaKnown RBP-0.05□□□□□ -2.42
KTN1-223ENST00000555573 COL12A1Q99715 3063 aa-0.05□□□□□ -2.42
KTN1-223ENST00000555573 SACSQ9NZJ4 4579 aa-0.05□□□□□ -2.42
KTN1-223ENST00000555573 NBEAL2Q6ZNJ1 2754 aa-0.05□□□□□ -2.42
KTN1-223ENST00000555573 NBEAQ8NFP9 2946 aa-0.05□□□□□ -2.42
KTN1-223ENST00000555573 FAM186AA6NE01 2351 aa-0.06□□□□□ -2.42
KTN1-223ENST00000555573 A0A0C4DFX4 3053 aa-0.06□□□□□ -2.42
KTN1-223ENST00000555573 SPENQ96T58 3664 aaKnown RBP-0.06□□□□□ -2.42
KTN1-223ENST00000555573 WFDC10BQ8IUB3 73 aa-0.07□□□□□ -2.42
KTN1-223ENST00000555573 WDR87Q6ZQQ6 2873 aa-0.08□□□□□ -2.42
KTN1-223ENST00000555573 ACACAQ13085 2346 aa-0.08□□□□□ -2.42
KTN1-223ENST00000555573 TRIOO75962 3097 aa-0.08□□□□□ -2.42
KTN1-223ENST00000555573 MT1AP04731 61 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms