RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 DMXL1Q9Y485 3027 aa-0.01□□□□□ -2.41
KTN1-222ENST00000555506 KIF1AQ12756 1690 aa-0.01□□□□□ -2.41
KTN1-222ENST00000555506 CUBNO60494 3623 aa-0.02□□□□□ -2.41
KTN1-222ENST00000555506 KRTAP20-1Q3LI63 56 aa-0.02□□□□□ -2.41
KTN1-222ENST00000555506 KRTAP6-2Q3LI66 62 aa-0.02□□□□□ -2.41
KTN1-222ENST00000555506 LRRK2Q5S007 2527 aa-0.02□□□□□ -2.41
KTN1-222ENST00000555506 KIAA1109Q2LD37 5005 aa-0.02□□□□□ -2.41
KTN1-222ENST00000555506 FAM186AA6NE01 2351 aa-0.02□□□□□ -2.41
KTN1-222ENST00000555506 PDZD2O15018 2839 aa-0.02□□□□□ -2.41
KTN1-222ENST00000555506 GCN1Q92616 2671 aaKnown RBP-0.02□□□□□ -2.41
KTN1-222ENST00000555506 CLASP1Q7Z460 1538 aa-0.02□□□□□ -2.41
KTN1-222ENST00000555506 MTORP42345 2549 aa-0.02□□□□□ -2.41
KTN1-222ENST00000555506 ANKRD36CQ5JPF3 1778 aa-0.02□□□□□ -2.41
KTN1-222ENST00000555506 SPRR2AP35326 72 aa-0.03□□□□□ -2.41
KTN1-222ENST00000555506 WT1-ASQ06250 92 aa-0.03□□□□□ -2.41
KTN1-222ENST00000555506 CROCC2H7BZ55 1655 aa-0.03□□□□□ -2.41
KTN1-222ENST00000555506 M0R1W7 72 aa-0.03□□□□□ -2.41
KTN1-222ENST00000555506 C6orf48Q9UBA6 75 aa-0.03□□□□□ -2.41
KTN1-222ENST00000555506 FASNP49327 2511 aaKnown RBP-0.03□□□□□ -2.42
KTN1-222ENST00000555506 AKAP9Q99996 3911 aa-0.04□□□□□ -2.42
KTN1-222ENST00000555506 C9orf92A6NGG3 77 aa-0.04□□□□□ -2.42
KTN1-222ENST00000555506 NCBP2-AS2Q69YL0 99 aa-0.04□□□□□ -2.42
KTN1-222ENST00000555506 SMIM5Q71RC9 77 aa-0.04□□□□□ -2.42
KTN1-222ENST00000555506 DEFB106AQ8N104 65 aa-0.04□□□□□ -2.42
KTN1-222ENST00000555506 RNF213Q63HN8 5207 aa-0.04□□□□□ -2.42
KTN1-222ENST00000555506 MAST1Q9Y2H9 1570 aa-0.05□□□□□ -2.42
KTN1-222ENST00000555506 IGIPA6NJ69 53 aa-0.05□□□□□ -2.42
KTN1-222ENST00000555506 TACC2O95359 2948 aa-0.05□□□□□ -2.42
KTN1-222ENST00000555506 FAT3Q8TDW7 4589 aa-0.06□□□□□ -2.42
KTN1-222ENST00000555506 ANK3Q12955 4377 aaKnown RBP-0.06□□□□□ -2.42
KTN1-222ENST00000555506 DNAH3Q8TD57 4116 aa-0.06□□□□□ -2.42
KTN1-222ENST00000555506 PRXQ9BXM0 1461 aa-0.06□□□□□ -2.42
KTN1-222ENST00000555506 HTTP42858 3142 aa-0.06□□□□□ -2.42
KTN1-222ENST00000555506 NMES1Q9C002 83 aa-0.06□□□□□ -2.42
KTN1-222ENST00000555506 SRRM2Q9UQ35 2752 aaKnown RBP-0.06□□□□□ -2.42
KTN1-222ENST00000555506 CDC42BPAQ5VT25 1732 aa-0.06□□□□□ -2.42
KTN1-222ENST00000555506 TOGARAM1Q9Y4F4 1720 aa-0.06□□□□□ -2.42
KTN1-222ENST00000555506 CPS1P31327 1500 aa-0.07□□□□□ -2.42
KTN1-222ENST00000555506 PKHD1L1Q86WI1 4243 aa-0.07□□□□□ -2.42
KTN1-222ENST00000555506 ACACAQ13085 2346 aa-0.07□□□□□ -2.42
KTN1-222ENST00000555506 SACSQ9NZJ4 4579 aa-0.07□□□□□ -2.42
KTN1-222ENST00000555506 H3BNG1 76 aa-0.07□□□□□ -2.42
KTN1-222ENST00000555506 FCER1GP30273 86 aa-0.07□□□□□ -2.42
KTN1-222ENST00000555506 SERF2P84101 59 aa-0.07□□□□□ -2.42
KTN1-222ENST00000555506 UGGT1Q9NYU2 1555 aa-0.07□□□□□ -2.42
KTN1-222ENST00000555506 ANKRD11Q6UB99 2663 aaPredicted RBP-0.07□□□□□ -2.42
KTN1-222ENST00000555506 RIF1Q5UIP0 2472 aaKnown RBP-0.08□□□□□ -2.42
KTN1-222ENST00000555506 APOBP04114 4563 aaKnown RBP-0.08□□□□□ -2.42
KTN1-222ENST00000555506 KALRNO60229 2985 aa-0.09□□□□□ -2.42
KTN1-222ENST00000555506 VPS13DQ5THJ4 4388 aa-0.09□□□□□ -2.42
KTN1-222ENST00000555506 UTP20O75691 2785 aaKnown RBP-0.09□□□□□ -2.42
KTN1-222ENST00000555506 TEP1Q99973 2627 aaKnown RBP-0.09□□□□□ -2.42
KTN1-222ENST00000555506 RYR3Q15413 4870 aa-0.09□□□□□ -2.42
KTN1-222ENST00000555506 EEA1Q15075 1411 aa-0.09□□□□□ -2.42
KTN1-222ENST00000555506 DNAH6Q9C0G6 4158 aa-0.1□□□□□ -2.42
KTN1-222ENST00000555506 NBPF19A0A087WUL8 3843 aa-0.1□□□□□ -2.43
KTN1-222ENST00000555506 NBEAL2Q6ZNJ1 2754 aa-0.1□□□□□ -2.43
KTN1-222ENST00000555506 SPRR2EP22531 72 aa-0.1□□□□□ -2.43
KTN1-222ENST00000555506 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.1□□□□□ -2.43
KTN1-222ENST00000555506 NBEAQ8NFP9 2946 aa-0.11□□□□□ -2.43
KTN1-222ENST00000555506 MYO18BQ8IUG5 2567 aa-0.11□□□□□ -2.43
KTN1-222ENST00000555506 DNAH2Q9P225 4427 aa-0.11□□□□□ -2.43
KTN1-222ENST00000555506 PREX2Q70Z35 1606 aa-0.11□□□□□ -2.43
KTN1-222ENST00000555506 MXRA5Q9NR99 2828 aa-0.11□□□□□ -2.43
KTN1-222ENST00000555506 HIVEP1P15822 2718 aa-0.11□□□□□ -2.43
KTN1-222ENST00000555506 DNAH11Q96DT5 4516 aa-0.12□□□□□ -2.43
KTN1-222ENST00000555506 H3BUA1 57 aa-0.12□□□□□ -2.43
KTN1-222ENST00000555506 KRTAP6-1Q3LI64 71 aa-0.12□□□□□ -2.43
KTN1-222ENST00000555506 CCDC168Q8NDH2 2452 aa-0.13□□□□□ -2.43
KTN1-222ENST00000555506 MT1AP04731 61 aa-0.13□□□□□ -2.43
KTN1-222ENST00000555506 MROH2AA6NES4 1674 aa-0.13□□□□□ -2.43
KTN1-222ENST00000555506 AGLP35573 1532 aa-0.14□□□□□ -2.43
KTN1-222ENST00000555506 IGLV5-48A0A075B6I7 105 aa-0.16□□□□□ -2.43
KTN1-222ENST00000555506 LINC00308Q8TCZ7 52 aa-0.16□□□□□ -2.43
KTN1-222ENST00000555506 TMEM167BQ9NRX6 74 aa-0.16□□□□□ -2.43
KTN1-222ENST00000555506 ACACBO00763 2458 aa-0.16□□□□□ -2.43
KTN1-222ENST00000555506 DOPEY1Q5JWR5 2465 aa-0.16□□□□□ -2.43
KTN1-222ENST00000555506 ABCA13Q86UQ4 5058 aa-0.16□□□□□ -2.43
KTN1-222ENST00000555506 SYCP2Q9BX26 1530 aa-0.16□□□□□ -2.43
KTN1-222ENST00000555506 RANBP2P49792 3224 aaKnown RBP-0.16□□□□□ -2.44
KTN1-222ENST00000555506 KRTAP19-7Q3SYF9 63 aa-0.16□□□□□ -2.44
KTN1-222ENST00000555506 A0A0C4DFX4 3053 aa-0.16□□□□□ -2.44
KTN1-222ENST00000555506 COL12A1Q99715 3063 aa-0.18□□□□□ -2.44
KTN1-222ENST00000555506 LAMA5O15230 3695 aa-0.18□□□□□ -2.44
KTN1-222ENST00000555506 H0YGX0 51 aa-0.18□□□□□ -2.44
KTN1-222ENST00000555506 SPRR2FQ96RM1 72 aa-0.18□□□□□ -2.44
KTN1-222ENST00000555506 ADCY10Q96PN6 1610 aa-0.18□□□□□ -2.44
KTN1-222ENST00000555506 DNAH1Q9P2D7 4330 aa-0.19□□□□□ -2.44
KTN1-222ENST00000555506 NOP10Q9NPE3 64 aaKnown RBP-0.19□□□□□ -2.44
KTN1-222ENST00000555506 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.19□□□□□ -2.44
KTN1-222ENST00000555506 MGAM2Q2M2H8 2515 aa-0.2□□□□□ -2.44
KTN1-222ENST00000555506 LAMA1P25391 3075 aa-0.2□□□□□ -2.44
KTN1-222ENST00000555506 HYDINQ4G0P3 5121 aa-0.2□□□□□ -2.44
KTN1-222ENST00000555506 A0A1B0GUL6 1792 aa-0.2□□□□□ -2.44
KTN1-222ENST00000555506 DNAH8Q96JB1 4490 aa-0.21□□□□□ -2.44
KTN1-222ENST00000555506 FAT1Q14517 4588 aa-0.21□□□□□ -2.44
KTN1-222ENST00000555506 SPENQ96T58 3664 aaKnown RBP-0.21□□□□□ -2.44
KTN1-222ENST00000555506 STARD9Q9P2P6 4700 aa-0.21□□□□□ -2.44
KTN1-222ENST00000555506 SPTBN5Q9NRC6 3674 aaKnown RBP-0.22□□□□□ -2.44
KTN1-222ENST00000555506 MMP24-AS1A0A0U1RRL7 71 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms