RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 ITSN2Q9NZM3 1697 aa-0.33□□□□□ -2.46
SCFD1-213ENST00000554776 ATP10BO94823 1461 aa-0.34□□□□□ -2.46
SCFD1-213ENST00000554776 ABCC10Q5T3U5 1492 aa-0.34□□□□□ -2.46
SCFD1-213ENST00000554776 MAP3K4Q9Y6R4 1608 aa-0.34□□□□□ -2.46
SCFD1-213ENST00000554776 TRBV7-7A0A0K0K1E9 115 aa-0.34□□□□□ -2.46
SCFD1-213ENST00000554776 D6R8Y8 96 aa-0.34□□□□□ -2.46
SCFD1-213ENST00000554776 TROQ12816 1431 aaPredicted RBP-0.34□□□□□ -2.46
SCFD1-213ENST00000554776 DEFB112Q30KQ8 113 aa-0.34□□□□□ -2.46
SCFD1-213ENST00000554776 SUPT6HQ7KZ85 1726 aaKnown RBP-0.34□□□□□ -2.46
SCFD1-213ENST00000554776 ZNF720Q7Z2F6 126 aa-0.34□□□□□ -2.46
SCFD1-213ENST00000554776 MUSTN1Q8IVN3 82 aa-0.34□□□□□ -2.46
SCFD1-213ENST00000554776 KIAA1551Q9HCM1 1747 aa-0.34□□□□□ -2.46
SCFD1-213ENST00000554776 S4R3F8 94 aa-0.34□□□□□ -2.46
SCFD1-213ENST00000554776 SAMD9Q5K651 1589 aa-0.35□□□□□ -2.47
SCFD1-213ENST00000554776 KIF20BQ96Q89 1820 aa-0.35□□□□□ -2.47
SCFD1-213ENST00000554776 C9orf92A6NGG3 77 aa-0.35□□□□□ -2.47
SCFD1-213ENST00000554776 MADDQ8WXG6 1647 aa-0.35□□□□□ -2.47
SCFD1-213ENST00000554776 CROCC2H7BZ55 1655 aa-0.36□□□□□ -2.47
SCFD1-213ENST00000554776 AKAP12Q02952 1782 aa-0.36□□□□□ -2.47
SCFD1-213ENST00000554776 SPTY2D1-AS1A0A0U1RR47 76 aa-0.36□□□□□ -2.47
SCFD1-213ENST00000554776 IGLC2P0DOY2 106 aa-0.36□□□□□ -2.47
SCFD1-213ENST00000554776 IGLC3P0DOY3 106 aa-0.36□□□□□ -2.47
SCFD1-213ENST00000554776 MRPL34Q9BQ48 92 aaKnown RBP-0.36□□□□□ -2.47
SCFD1-213ENST00000554776 SNHG12Q9BXW3 62 aa-0.36□□□□□ -2.47
SCFD1-213ENST00000554776 HIGD1BQ9P298 99 aa-0.36□□□□□ -2.47
SCFD1-213ENST00000554776 KIF14Q15058 1648 aa-0.36□□□□□ -2.47
SCFD1-213ENST00000554776 ABCA6Q8N139 1617 aa-0.36□□□□□ -2.47
SCFD1-213ENST00000554776 MYO5CQ9NQX4 1742 aa-0.36□□□□□ -2.47
SCFD1-213ENST00000554776 TIAM1Q13009 1591 aa-0.36□□□□□ -2.47
SCFD1-213ENST00000554776 TRPM2O94759 1503 aa-0.37□□□□□ -2.47
SCFD1-213ENST00000554776 K7EP34 96 aa-0.37□□□□□ -2.47
SCFD1-213ENST00000554776 HEPN1Q6WQI6 88 aa-0.37□□□□□ -2.47
SCFD1-213ENST00000554776 UGGT1Q9NYU2 1555 aa-0.37□□□□□ -2.47
SCFD1-213ENST00000554776 NHSQ6T4R5 1651 aa-0.37□□□□□ -2.47
SCFD1-213ENST00000554776 CFAP43Q8NDM7 1665 aa-0.37□□□□□ -2.47
SCFD1-213ENST00000554776 EFCAB6Q5THR3 1501 aa-0.38□□□□□ -2.47
SCFD1-213ENST00000554776 CLASP1Q7Z460 1538 aa-0.38□□□□□ -2.47
SCFD1-213ENST00000554776 KDM5DQ9BY66 1539 aa-0.38□□□□□ -2.47
SCFD1-213ENST00000554776 DDX60LQ5H9U9 1706 aaKnown RBP-0.38□□□□□ -2.47
SCFD1-213ENST00000554776 RICTORQ6R327 1708 aa-0.38□□□□□ -2.47
SCFD1-213ENST00000554776 H3BNG1 76 aa-0.38□□□□□ -2.47
SCFD1-213ENST00000554776 DEFB110Q30KQ9 67 aa-0.38□□□□□ -2.47
SCFD1-213ENST00000554776 PRO3102Q9H379 93 aa-0.38□□□□□ -2.47
SCFD1-213ENST00000554776 NCOA2Q15596 1464 aa-0.38□□□□□ -2.47
SCFD1-213ENST00000554776 PLXNC1O60486 1568 aa-0.38□□□□□ -2.47
SCFD1-213ENST00000554776 LRRC7Q96NW7 1537 aa-0.38□□□□□ -2.47
SCFD1-213ENST00000554776 PPLO60437 1756 aa-0.39□□□□□ -2.47
SCFD1-213ENST00000554776 ALS2Q96Q42 1657 aa-0.39□□□□□ -2.47
SCFD1-213ENST00000554776 RB1CC1Q8TDY2 1594 aa-0.39□□□□□ -2.47
SCFD1-213ENST00000554776 A8MTW9 85 aa-0.39□□□□□ -2.47
SCFD1-213ENST00000554776 HMGN3Q15651 99 aa-0.39□□□□□ -2.47
SCFD1-213ENST00000554776 DEFB135Q30KP9 77 aa-0.39□□□□□ -2.47
SCFD1-213ENST00000554776 DEFB124Q8NES8 71 aa-0.39□□□□□ -2.47
SCFD1-213ENST00000554776 PIK3C2BO00750 1634 aa-0.39□□□□□ -2.47
SCFD1-213ENST00000554776 NFAT5O94916 1531 aa-0.39□□□□□ -2.47
SCFD1-213ENST00000554776 DUOX2Q9NRD8 1548 aa-0.39□□□□□ -2.47
SCFD1-213ENST00000554776 DNMBPQ6XZF7 1577 aa-0.4□□□□□ -2.47
SCFD1-213ENST00000554776 PKIAP61925 76 aa-0.4□□□□□ -2.47
SCFD1-213ENST00000554776 C20orf78Q9BR46 151 aa-0.4□□□□□ -2.47
SCFD1-213ENST00000554776 SCRIBQ14160 1630 aa-0.4□□□□□ -2.47
SCFD1-213ENST00000554776 ERICH3Q5RHP9 1530 aa-0.4□□□□□ -2.47
SCFD1-213ENST00000554776 VPS8Q8N3P4 1428 aa-0.4□□□□□ -2.47
SCFD1-213ENST00000554776 FAM208AQ9UK61 1670 aaKnown RBP-0.4□□□□□ -2.47
SCFD1-213ENST00000554776 MYO3AQ8NEV4 1616 aa-0.41□□□□□ -2.47
SCFD1-213ENST00000554776 NEXMIFQ5QGS0 1516 aa-0.41□□□□□ -2.48
SCFD1-213ENST00000554776 S100A8P05109 93 aa-0.41□□□□□ -2.48
SCFD1-213ENST00000554776 ALKAL2Q6UX46 152 aa-0.41□□□□□ -2.48
SCFD1-213ENST00000554776 UBE2D4Q9Y2X8 147 aa-0.41□□□□□ -2.48
SCFD1-213ENST00000554776 EEA1Q15075 1411 aa-0.41□□□□□ -2.48
SCFD1-213ENST00000554776 ANKRD50Q9ULJ7 1429 aa-0.41□□□□□ -2.48
SCFD1-213ENST00000554776 GLI2P10070 1586 aa-0.41□□□□□ -2.48
SCFD1-213ENST00000554776 ERVK-7P63135 1459 aa-0.41□□□□□ -2.48
SCFD1-213ENST00000554776 KIF21BO75037 1637 aa-0.42□□□□□ -2.48
SCFD1-213ENST00000554776 CCDC180Q9P1Z9 1646 aa-0.42□□□□□ -2.48
SCFD1-213ENST00000554776 ARFGEF2Q9Y6D5 1785 aa-0.42□□□□□ -2.48
SCFD1-213ENST00000554776 MAGI3Q5TCQ9 1506 aa-0.42□□□□□ -2.48
SCFD1-213ENST00000554776 IQGAP1P46940 1657 aa-0.42□□□□□ -2.48
SCFD1-213ENST00000554776 KIF1AQ12756 1690 aa-0.42□□□□□ -2.48
SCFD1-213ENST00000554776 LMO7Q8WWI1 1683 aa-0.42□□□□□ -2.48
SCFD1-213ENST00000554776 PRLHP81277 87 aa-0.42□□□□□ -2.48
SCFD1-213ENST00000554776 CLPSL2Q6UWE3 100 aa-0.42□□□□□ -2.48
SCFD1-213ENST00000554776 RPS27LQ71UM5 84 aaKnown RBP-0.42□□□□□ -2.48
SCFD1-213ENST00000554776 LRRC9Q6ZRR7 1453 aa-0.42□□□□□ -2.48
SCFD1-213ENST00000554776 MROH2AA6NES4 1674 aa-0.43□□□□□ -2.48
SCFD1-213ENST00000554776 EPRSP07814 1512 aaKnown RBP-0.43□□□□□ -2.48
SCFD1-213ENST00000554776 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.43□□□□□ -2.48
SCFD1-213ENST00000554776 DCAF1Q9Y4B6 1507 aa-0.43□□□□□ -2.48
SCFD1-213ENST00000554776 NWD1Q149M9 1564 aa-0.43□□□□□ -2.48
SCFD1-213ENST00000554776 H3BSH0 61 aa-0.43□□□□□ -2.48
SCFD1-213ENST00000554776 CCL22O00626 93 aa-0.43□□□□□ -2.48
SCFD1-213ENST00000554776 DEFB136Q30KP8 78 aa-0.43□□□□□ -2.48
SCFD1-213ENST00000554776 FANCAO15360 1455 aa-0.43□□□□□ -2.48
SCFD1-213ENST00000554776 RALGAPBQ86X10 1494 aa-0.43□□□□□ -2.48
SCFD1-213ENST00000554776 C3P01024 1663 aa-0.43□□□□□ -2.48
SCFD1-213ENST00000554776 ABCC3O15438 1527 aa-0.43□□□□□ -2.48
SCFD1-213ENST00000554776 DIP2AQ14689 1571 aa-0.44□□□□□ -2.48
SCFD1-213ENST00000554776 M0QZ58 72 aa-0.44□□□□□ -2.48
SCFD1-213ENST00000554776 STATHP02808 62 aa-0.44□□□□□ -2.48
SCFD1-213ENST00000554776 WFDC13Q8IUB5 93 aa-0.44□□□□□ -2.48
SCFD1-213ENST00000554776 AGLP35573 1532 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms