RNA–Protein interactions for RNA: ENST00000552674.5

SMARCC2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,730 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-214ENST00000552674 LINC00313P59037 77 aa5.73□□□□□ -1.49
SMARCC2-214ENST00000552674 C7orf65Q6ZTY9 151 aa5.73□□□□□ -1.49
SMARCC2-214ENST00000552674 LINC01558Q9Y6Z2 57 aa5.73□□□□□ -1.49
SMARCC2-214ENST00000552674 A0A087WTM6 91 aa5.72□□□□□ -1.49
SMARCC2-214ENST00000552674 SPACA4Q8TDM5 124 aa5.72□□□□□ -1.49
SMARCC2-214ENST00000552674 A0A087X002 238 aa5.71□□□□□ -1.5
SMARCC2-214ENST00000552674 NOTCH2NLQ7Z3S9 236 aa5.71□□□□□ -1.5
SMARCC2-214ENST00000552674 C1orf134Q5TEV5 83 aa5.7□□□□□ -1.5
SMARCC2-214ENST00000552674 CSMD3Q7Z407 3707 aa5.69□□□□□ -1.5
SMARCC2-214ENST00000552674 FAM229AH3BQW9 127 aa5.68□□□□□ -1.5
SMARCC2-214ENST00000552674 WWC2-AS2Q96NR7 200 aa5.67□□□□□ -1.5
SMARCC2-214ENST00000552674 Q6ZR54 194 aa5.66□□□□□ -1.5
SMARCC2-214ENST00000552674 DNAH1Q9P2D7 4330 aa5.66□□□□□ -1.5
SMARCC2-214ENST00000552674 C8orf87E5RJ46 101 aa5.65□□□□□ -1.5
SMARCC2-214ENST00000552674 PRAC1Q96KF2 57 aa5.65□□□□□ -1.5
SMARCC2-214ENST00000552674 COL7A1Q02388 2944 aa5.65□□□□□ -1.5
SMARCC2-214ENST00000552674 IGLV7-43P04211 117 aa5.65□□□□□ -1.51
SMARCC2-214ENST00000552674 Q5W150 140 aa5.64□□□□□ -1.51
SMARCC2-214ENST00000552674 UQCR11O14957 56 aa5.63□□□□□ -1.51
SMARCC2-214ENST00000552674 MIR22HGQ0VDD5 57 aa5.63□□□□□ -1.51
SMARCC2-214ENST00000552674 Q96NJ1 140 aa5.63□□□□□ -1.51
SMARCC2-214ENST00000552674 SSBP3-AS1Q7Z2R9 100 aa5.62□□□□□ -1.51
SMARCC2-214ENST00000552674 TGP01266 2768 aa5.62□□□□□ -1.51
SMARCC2-214ENST00000552674 LYSTQ99698 3801 aa5.61□□□□□ -1.51
SMARCC2-214ENST00000552674 A6NN06 94 aa5.6□□□□□ -1.51
SMARCC2-214ENST00000552674 KRTAP13-1Q8IUC0 172 aa5.6□□□□□ -1.51
SMARCC2-214ENST00000552674 LINC00483Q53H64 154 aa5.59□□□□□ -1.51
SMARCC2-214ENST00000552674 DYNC2H1Q8NCM8 4307 aaKnown RBP5.58□□□□□ -1.52
SMARCC2-214ENST00000552674 Q8N1X5 172 aa5.57□□□□□ -1.52
SMARCC2-214ENST00000552674 PLAC8Q9NZF1 115 aa5.57□□□□□ -1.52
SMARCC2-214ENST00000552674 TYMSOSQ8TAI1 123 aa5.55□□□□□ -1.52
SMARCC2-214ENST00000552674 PLA2G1BP04054 148 aaKnown RBP5.55□□□□□ -1.52
SMARCC2-214ENST00000552674 Q6ZRN7 208 aaPredicted RBP5.55□□□□□ -1.52
SMARCC2-214ENST00000552674 DMBT1Q9UGM3 2413 aaPredicted RBP5.55□□□□□ -1.52
SMARCC2-214ENST00000552674 DMAC1Q96GE9 116 aa5.52□□□□□ -1.53
SMARCC2-214ENST00000552674 ADM2Q7Z4H4 148 aa5.52□□□□□ -1.53
SMARCC2-214ENST00000552674 DNAH7Q8WXX0 4024 aa5.52□□□□□ -1.53
SMARCC2-214ENST00000552674 K7ERS5 55 aa5.51□□□□□ -1.53
SMARCC2-214ENST00000552674 FLG2Q5D862 2391 aaPredicted RBP5.51□□□□□ -1.53
SMARCC2-214ENST00000552674 ASB16-AS1Q495Z4 193 aa5.5□□□□□ -1.53
SMARCC2-214ENST00000552674 LINC01554Q52M75 96 aa5.48□□□□□ -1.53
SMARCC2-214ENST00000552674 FBN3Q75N90 2809 aa5.48□□□□□ -1.53
SMARCC2-214ENST00000552674 C9orf92A6NGG3 77 aa5.47□□□□□ -1.53
SMARCC2-214ENST00000552674 DNAH10Q8IVF4 4471 aa5.46□□□□□ -1.54
SMARCC2-214ENST00000552674 CSAG1Q6PB30 78 aa5.46□□□□□ -1.54
SMARCC2-214ENST00000552674 HUWE1Q7Z6Z7 4374 aaKnown RBP5.46□□□□□ -1.54
SMARCC2-214ENST00000552674 PRKDCP78527 4128 aaKnown RBP5.45□□□□□ -1.54
SMARCC2-214ENST00000552674 KRTAP10-2P60368 255 aa5.44□□□□□ -1.54
SMARCC2-214ENST00000552674 SPATA8Q6RVD6 105 aa5.42□□□□□ -1.54
SMARCC2-214ENST00000552674 SMR3BP02814 79 aaPredicted RBP5.41□□□□□ -1.54
SMARCC2-214ENST00000552674 LINC00304Q8N9R0 145 aa5.41□□□□□ -1.54
SMARCC2-214ENST00000552674 DNAH9Q9NYC9 4486 aa5.4□□□□□ -1.54
SMARCC2-214ENST00000552674 H3BS24 57 aa5.39□□□□□ -1.55
SMARCC2-214ENST00000552674 KRTAP13-2Q52LG2 175 aa5.39□□□□□ -1.55
SMARCC2-214ENST00000552674 MEGF8Q7Z7M0 2845 aa5.39□□□□□ -1.55
SMARCC2-214ENST00000552674 KRTAP10-1P60331 282 aa5.38□□□□□ -1.55
SMARCC2-214ENST00000552674 A0A1B0GU33 70 aa5.36□□□□□ -1.55
SMARCC2-214ENST00000552674 CRIPTQ9P021 101 aa5.36□□□□□ -1.55
SMARCC2-214ENST00000552674 KRTAP13-3Q3SY46 172 aa5.34□□□□□ -1.55
SMARCC2-214ENST00000552674 FRAS1Q86XX4 4008 aa5.32□□□□□ -1.56
SMARCC2-214ENST00000552674 DNHD1Q96M86 4753 aa5.3□□□□□ -1.56
SMARCC2-214ENST00000552674 A0A0D9SG42 100 aa5.3□□□□□ -1.56
SMARCC2-214ENST00000552674 DNAH6Q9C0G6 4158 aa5.28□□□□□ -1.56
SMARCC2-214ENST00000552674 HECTD4Q9Y4D8 3996 aa5.27□□□□□ -1.57
SMARCC2-214ENST00000552674 STARD9Q9P2P6 4700 aa5.27□□□□□ -1.57
SMARCC2-214ENST00000552674 PLECQ15149 4684 aaKnown RBP5.27□□□□□ -1.57
SMARCC2-214ENST00000552674 KRTAP16-1A8MUX0 517 aa5.25□□□□□ -1.57
SMARCC2-214ENST00000552674 SPINT4Q6UDR6 99 aa5.25□□□□□ -1.57
SMARCC2-214ENST00000552674 DNAH2Q9P225 4427 aa5.25□□□□□ -1.57
SMARCC2-214ENST00000552674 VPS13DQ5THJ4 4388 aa5.23□□□□□ -1.57
SMARCC2-214ENST00000552674 H1FX-AS1Q4G0G2 97 aa5.23□□□□□ -1.57
SMARCC2-214ENST00000552674 KRTAP1-4P0C5Y4 121 aa5.22□□□□□ -1.57
SMARCC2-214ENST00000552674 Q6ZSA8 131 aa5.21□□□□□ -1.58
SMARCC2-214ENST00000552674 KMT2AQ03164 3969 aa5.18□□□□□ -1.58
SMARCC2-214ENST00000552674 H0YAA0 97 aa5.18□□□□□ -1.58
SMARCC2-214ENST00000552674 KRTAP25-1Q3LHN0 102 aa5.17□□□□□ -1.58
SMARCC2-214ENST00000552674 PKD1P98161 4303 aa5.15□□□□□ -1.58
SMARCC2-214ENST00000552674 COX6B2Q6YFQ2 88 aa5.13□□□□□ -1.59
SMARCC2-214ENST00000552674 A8MUU9 505 aa5.12□□□□□ -1.59
SMARCC2-214ENST00000552674 DNAH11Q96DT5 4516 aa5.12□□□□□ -1.59
SMARCC2-214ENST00000552674 FAT2Q9NYQ8 4349 aa5.11□□□□□ -1.59
SMARCC2-214ENST00000552674 RPL37P61927 97 aaKnown RBP5.11□□□□□ -1.59
SMARCC2-214ENST00000552674 ROMO1P60602 79 aa5.1□□□□□ -1.59
SMARCC2-214ENST00000552674 DNAH8Q96JB1 4490 aa5.09□□□□□ -1.59
SMARCC2-214ENST00000552674 DNAH17Q9UFH2 4485 aa5.09□□□□□ -1.6
SMARCC2-214ENST00000552674 HYDINQ4G0P3 5121 aa5.09□□□□□ -1.6
SMARCC2-214ENST00000552674 ALMS1Q8TCU4 4167 aa5.07□□□□□ -1.6
SMARCC2-214ENST00000552674 C20orf166-AS1Q96NR2 134 aa5.07□□□□□ -1.6
SMARCC2-214ENST00000552674 RPS29P62273 56 aaKnown RBP5.06□□□□□ -1.6
SMARCC2-214ENST00000552674 S4R3F8 94 aa5.05□□□□□ -1.6
SMARCC2-214ENST00000552674 DNAH5Q8TE73 4624 aa5.05□□□□□ -1.6
SMARCC2-214ENST00000552674 KRTAP3-1Q9BYR8 98 aa5.01□□□□□ -1.61
SMARCC2-214ENST00000552674 C10orf95Q9H7T3 257 aa4.97□□□□□ -1.61
SMARCC2-214ENST00000552674 SACSQ9NZJ4 4579 aa4.95□□□□□ -1.62
SMARCC2-214ENST00000552674 NDUFAF8A1L188 74 aa4.9□□□□□ -1.62
SMARCC2-214ENST00000552674 Q5VSD8 79 aa4.9□□□□□ -1.62
SMARCC2-214ENST00000552674 PKHD1L1Q86WI1 4243 aa4.9□□□□□ -1.63
SMARCC2-214ENST00000552674 LRP1BQ9NZR2 4599 aa4.89□□□□□ -1.63
SMARCC2-214ENST00000552674 P0C880 135 aa4.89□□□□□ -1.63
SMARCC2-214ENST00000552674 PKHD1P08F94 4074 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms