RNA–Protein interactions for RNA: ENST00000549207.1

RRN3P3-201, Transcript of RRN3 homolog, RNA polymerase I transcription factor pseudogene 3, humanhuman

BASIC

Gene RRN3P3, Length 578 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3P3-201ENST00000549207 MKI67P46013 3256 aaKnown RBP0.46□□□□□ -2.34
RRN3P3-201ENST00000549207 SPEGQ15772 3267 aa0.46□□□□□ -2.34
RRN3P3-201ENST00000549207 USP34Q70CQ2 3546 aa0.46□□□□□ -2.34
RRN3P3-201ENST00000549207 LAMA5O15230 3695 aa0.46□□□□□ -2.34
RRN3P3-201ENST00000549207 WDR87Q6ZQQ6 2873 aa0.46□□□□□ -2.34
RRN3P3-201ENST00000549207 MUC3AQ02505 3323 aa0.46□□□□□ -2.34
RRN3P3-201ENST00000549207 AKAP13Q12802 2813 aa0.46□□□□□ -2.34
RRN3P3-201ENST00000549207 PTPRZ1P23471 2315 aaPredicted RBP0.46□□□□□ -2.34
RRN3P3-201ENST00000549207 KMT2AQ03164 3969 aa0.45□□□□□ -2.34
RRN3P3-201ENST00000549207 PRUNE2Q8WUY3 3088 aa0.45□□□□□ -2.34
RRN3P3-201ENST00000549207 COL12A1Q99715 3063 aa0.45□□□□□ -2.34
RRN3P3-201ENST00000549207 PDZD2O15018 2839 aa0.45□□□□□ -2.34
RRN3P3-201ENST00000549207 APCP25054 2843 aa0.45□□□□□ -2.34
RRN3P3-201ENST00000549207 SMG1Q96Q15 3661 aaKnown RBP0.45□□□□□ -2.34
RRN3P3-201ENST00000549207 DEFB124Q8NES8 71 aa0.45□□□□□ -2.34
RRN3P3-201ENST00000549207 FRAS1Q86XX4 4008 aa0.45□□□□□ -2.34
RRN3P3-201ENST00000549207 WDFY4Q6ZS81 3184 aa0.45□□□□□ -2.34
RRN3P3-201ENST00000549207 PCNTO95613 3336 aa0.45□□□□□ -2.34
RRN3P3-201ENST00000549207 MAP1AP78559 2803 aaPredicted RBP0.45□□□□□ -2.34
RRN3P3-201ENST00000549207 CSMD3Q7Z407 3707 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 CMYA5Q8N3K9 4069 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 VPS13BQ7Z7G8 4022 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 SACSQ9NZJ4 4579 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 ANK2Q01484 3957 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 PRKDCP78527 4128 aaKnown RBP0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 FREM2Q5SZK8 3169 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 LAMA3Q16787 3333 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 NOTCH1P46531 2555 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 SETD2Q9BYW2 2564 aaPredicted RBP0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 ZDBF2Q9HCK1 2354 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 A0A0D9SG42 100 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 APELAP0DMC3 54 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 PRO0255Q9UI72 69 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 APLNQ9ULZ1 77 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 DNAH12Q6ZR08 3092 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 BRCA2P51587 3418 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 ITPR3Q14573 2671 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 PKHD1L1Q86WI1 4243 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 DNAH1Q9P2D7 4330 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 DCHS1Q96JQ0 3298 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 SPTBN4Q9H254 2564 aa0.44□□□□□ -2.34
RRN3P3-201ENST00000549207 SPTBN2O15020 2390 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 ASPMQ8IZT6 3477 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 KALRNO60229 2985 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 ZNF469Q96JG9 3925 aaPredicted RBP0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 TENM4Q6N022 2769 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 SPTA1P02549 2419 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 H3BNG1 76 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 DEFB110Q30KQ9 67 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 Q9Y3F1 56 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 EP400Q96L91 3159 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 F8P00451 2351 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 ROS1P08922 2347 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 AKAP6Q13023 2319 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 ACACAQ13085 2346 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 ITPR1Q14643 2758 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 XIRP2A4UGR9 3374 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 DNAH3Q8TD57 4116 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 C5orf42Q9H799 3197 aa0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 ANK3Q12955 4377 aaKnown RBP0.43□□□□□ -2.34
RRN3P3-201ENST00000549207 LOC400499M0QZD8 3231 aa0.42□□□□□ -2.34
RRN3P3-201ENST00000549207 FBN2P35556 2912 aa0.42□□□□□ -2.34
RRN3P3-201ENST00000549207 SRRM2Q9UQ35 2752 aaKnown RBP0.42□□□□□ -2.34
RRN3P3-201ENST00000549207 TNXBP22105 4242 aa0.42□□□□□ -2.34
RRN3P3-201ENST00000549207 DYNC2H1Q8NCM8 4307 aaKnown RBP0.42□□□□□ -2.34
RRN3P3-201ENST00000549207 UNC80Q8N2C7 3258 aa0.42□□□□□ -2.34
RRN3P3-201ENST00000549207 PKDREJQ9NTG1 2253 aa0.42□□□□□ -2.34
RRN3P3-201ENST00000549207 KRTAP8-1Q8IUC2 63 aa0.42□□□□□ -2.34
RRN3P3-201ENST00000549207 SMR3AQ99954 134 aa0.42□□□□□ -2.34
RRN3P3-201ENST00000549207 NSD1Q96L73 2696 aaPredicted RBP0.42□□□□□ -2.34
RRN3P3-201ENST00000549207 LYSTQ99698 3801 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 DMXL1Q9Y485 3027 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 DNAH7Q8WXX0 4024 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 APC2O95996 2303 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 USP9YO00507 2555 aaPredicted RBP0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 CSMD1Q96PZ7 3565 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 RPS29P62273 56 aaKnown RBP0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 LINC01556Q5JQF7 62 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 TACC2O95359 2948 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 DCHS2Q6V1P9 2916 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 CACNA1HO95180 2353 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 DNAH17Q9UFH2 4485 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 CSPG4Q6UVK1 2322 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 COL7A1Q02388 2944 aa0.41□□□□□ -2.34
RRN3P3-201ENST00000549207 HIVEP3Q5T1R4 2406 aa0.4□□□□□ -2.34
RRN3P3-201ENST00000549207 GVINP1Q7Z2Y8 2422 aa0.4□□□□□ -2.34
RRN3P3-201ENST00000549207 NCOR2Q9Y618 2525 aa0.4□□□□□ -2.34
RRN3P3-201ENST00000549207 DNAH6Q9C0G6 4158 aa0.4□□□□□ -2.34
RRN3P3-201ENST00000549207 LAMA1P25391 3075 aa0.4□□□□□ -2.35
RRN3P3-201ENST00000549207 DNAH2Q9P225 4427 aa0.4□□□□□ -2.35
RRN3P3-201ENST00000549207 FLGP20930 4061 aaPredicted RBP0.4□□□□□ -2.35
RRN3P3-201ENST00000549207 SPINK1P00995 79 aa0.4□□□□□ -2.35
RRN3P3-201ENST00000549207 EP300Q09472 2414 aaPredicted RBP0.4□□□□□ -2.35
RRN3P3-201ENST00000549207 DNAH10Q8IVF4 4471 aa0.4□□□□□ -2.35
RRN3P3-201ENST00000549207 MYO15AQ9UKN7 3530 aa0.4□□□□□ -2.35
RRN3P3-201ENST00000549207 HIVEP1P15822 2718 aa0.4□□□□□ -2.35
RRN3P3-201ENST00000549207 FLNCQ14315 2725 aa0.4□□□□□ -2.35
RRN3P3-201ENST00000549207 HSPG2P98160 4391 aa0.4□□□□□ -2.35
RRN3P3-201ENST00000549207 HUWE1Q7Z6Z7 4374 aaKnown RBP0.4□□□□□ -2.35
RRN3P3-201ENST00000549207 NCOR1O75376 2440 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms