RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 LRP1BQ9NZR2 4599 aa9.48□□□□□ -0.89
SNRNP70-203ENST00000544278 LCE6AA0A183 80 aa9.47□□□□□ -0.89
SNRNP70-203ENST00000544278 A0A087X002 238 aa9.47□□□□□ -0.89
SNRNP70-203ENST00000544278 NOTCH2NLQ7Z3S9 236 aa9.47□□□□□ -0.89
SNRNP70-203ENST00000544278 CIRBP-AS1Q8TBR5 109 aa9.47□□□□□ -0.89
SNRNP70-203ENST00000544278 DNAH5Q8TE73 4624 aa9.47□□□□□ -0.89
SNRNP70-203ENST00000544278 CYP4F30PQ9H0H9 118 aa9.46□□□□□ -0.89
SNRNP70-203ENST00000544278 NDUFS5O43920 106 aa9.46□□□□□ -0.89
SNRNP70-203ENST00000544278 PCOTHQ58A44 107 aa9.46□□□□□ -0.89
SNRNP70-203ENST00000544278 H0Y9P7 68 aa9.45□□□□□ -0.9
SNRNP70-203ENST00000544278 SPAG11AQ6PDA7 123 aa9.44□□□□□ -0.9
SNRNP70-203ENST00000544278 A8MWP4 228 aa9.44□□□□□ -0.9
SNRNP70-203ENST00000544278 C8orf87E5RJ46 101 aa9.44□□□□□ -0.9
SNRNP70-203ENST00000544278 WWC2-AS2Q96NR7 200 aa9.44□□□□□ -0.9
SNRNP70-203ENST00000544278 NDUFB1O75438 58 aa9.43□□□□□ -0.9
SNRNP70-203ENST00000544278 KRTAP29-1A8MX34 341 aaPredicted RBP9.43□□□□□ -0.9
SNRNP70-203ENST00000544278 ZNF861PO60384 105 aa9.41□□□□□ -0.9
SNRNP70-203ENST00000544278 Q96NJ1 140 aa9.4□□□□□ -0.9
SNRNP70-203ENST00000544278 LIMD2Q9BT23 127 aa9.4□□□□□ -0.91
SNRNP70-203ENST00000544278 MMP24-AS1A0A0U1RRL7 71 aa9.39□□□□□ -0.91
SNRNP70-203ENST00000544278 PLAC8Q9NZF1 115 aa9.39□□□□□ -0.91
SNRNP70-203ENST00000544278 COA5Q86WW8 74 aa9.37□□□□□ -0.91
SNRNP70-203ENST00000544278 RETNLBQ9BQ08 111 aa9.37□□□□□ -0.91
SNRNP70-203ENST00000544278 ALMS1Q8TCU4 4167 aa9.36□□□□□ -0.91
SNRNP70-203ENST00000544278 ATP11AUNQ6ZP68 121 aa9.35□□□□□ -0.91
SNRNP70-203ENST00000544278 IGLV7-43P04211 117 aa9.35□□□□□ -0.91
SNRNP70-203ENST00000544278 KRTAP10-1P60331 282 aa9.34□□□□□ -0.91
SNRNP70-203ENST00000544278 PRAC1Q96KF2 57 aa9.34□□□□□ -0.91
SNRNP70-203ENST00000544278 PKHD1P08F94 4074 aa9.34□□□□□ -0.91
SNRNP70-203ENST00000544278 FAT2Q9NYQ8 4349 aa9.31□□□□□ -0.92
SNRNP70-203ENST00000544278 A6NN06 94 aa9.31□□□□□ -0.92
SNRNP70-203ENST00000544278 CDK2AP2O75956 126 aa9.31□□□□□ -0.92
SNRNP70-203ENST00000544278 SPINK7P58062 85 aa9.31□□□□□ -0.92
SNRNP70-203ENST00000544278 C8orf17Q9NRJ1 99 aa9.31□□□□□ -0.92
SNRNP70-203ENST00000544278 LINC00483Q53H64 154 aa9.3□□□□□ -0.92
SNRNP70-203ENST00000544278 ZNF706Q9Y5V0 76 aaPredicted RBP9.28□□□□□ -0.92
SNRNP70-203ENST00000544278 LOC101927531A0A1B0GV80 90 aa9.27□□□□□ -0.92
SNRNP70-203ENST00000544278 J3QL48 77 aa9.27□□□□□ -0.92
SNRNP70-203ENST00000544278 VPS13BQ7Z7G8 4022 aa9.27□□□□□ -0.93
SNRNP70-203ENST00000544278 Q75L30 129 aa9.27□□□□□ -0.93
SNRNP70-203ENST00000544278 A0A1B0GVX0 72 aa9.26□□□□□ -0.93
SNRNP70-203ENST00000544278 ADM2Q7Z4H4 148 aa9.25□□□□□ -0.93
SNRNP70-203ENST00000544278 C7orf65Q6ZTY9 151 aa9.25□□□□□ -0.93
SNRNP70-203ENST00000544278 CDC42SE1Q9NRR8 79 aa9.24□□□□□ -0.93
SNRNP70-203ENST00000544278 PKD1P98161 4303 aa9.24□□□□□ -0.93
SNRNP70-203ENST00000544278 SMR3BP02814 79 aaPredicted RBP9.23□□□□□ -0.93
SNRNP70-203ENST00000544278 FAT1Q14517 4588 aa9.22□□□□□ -0.93
SNRNP70-203ENST00000544278 SPANXA2-OT1Q8N9U9 137 aa9.22□□□□□ -0.93
SNRNP70-203ENST00000544278 Q5W150 140 aa9.2□□□□□ -0.94
SNRNP70-203ENST00000544278 KRTAP13-2Q52LG2 175 aa9.2□□□□□ -0.94
SNRNP70-203ENST00000544278 MRPL34Q9BQ48 92 aaKnown RBP9.18□□□□□ -0.94
SNRNP70-203ENST00000544278 LINC00313P59037 77 aa9.17□□□□□ -0.94
SNRNP70-203ENST00000544278 SACSQ9NZJ4 4579 aa9.14□□□□□ -0.95
SNRNP70-203ENST00000544278 IGLV7-46A0A075B6I9 117 aa9.14□□□□□ -0.95
SNRNP70-203ENST00000544278 HRES1P13985 223 aa9.11□□□□□ -0.95
SNRNP70-203ENST00000544278 LINC01558Q9Y6Z2 57 aa9.09□□□□□ -0.95
SNRNP70-203ENST00000544278 H3BPC8 53 aa9.09□□□□□ -0.96
SNRNP70-203ENST00000544278 PLA2G1BP04054 148 aaKnown RBP9.09□□□□□ -0.96
SNRNP70-203ENST00000544278 DYNC1H1Q14204 4646 aaKnown RBP9.08□□□□□ -0.96
SNRNP70-203ENST00000544278 ASB16-AS1Q495Z4 193 aa9.08□□□□□ -0.96
SNRNP70-203ENST00000544278 KRTAP21-3Q3LHN1 58 aa9.07□□□□□ -0.96
SNRNP70-203ENST00000544278 FLG2Q5D862 2391 aaPredicted RBP9.06□□□□□ -0.96
SNRNP70-203ENST00000544278 KMT2CQ8NEZ4 4911 aaKnown RBP9.05□□□□□ -0.96
SNRNP70-203ENST00000544278 KRTAP1-4P0C5Y4 121 aa9.05□□□□□ -0.96
SNRNP70-203ENST00000544278 Q6ZSA8 131 aa9.04□□□□□ -0.96
SNRNP70-203ENST00000544278 TP53AIP1Q9HCN2 124 aa9.03□□□□□ -0.96
SNRNP70-203ENST00000544278 SSBP3-AS1Q7Z2R9 100 aa9.03□□□□□ -0.96
SNRNP70-203ENST00000544278 LINC01554Q52M75 96 aa9.02□□□□□ -0.97
SNRNP70-203ENST00000544278 TYMSOSQ8TAI1 123 aa9□□□□□ -0.97
SNRNP70-203ENST00000544278 DMBT1Q9UGM3 2413 aaPredicted RBP8.99□□□□□ -0.97
SNRNP70-203ENST00000544278 IGKV2D-30A0A075B6S6 120 aa8.98□□□□□ -0.97
SNRNP70-203ENST00000544278 IGKV2-30P06310 120 aa8.98□□□□□ -0.97
SNRNP70-203ENST00000544278 C9orf92A6NGG3 77 aa8.92□□□□□ -0.98
SNRNP70-203ENST00000544278 KRTAP13-3Q3SY46 172 aa8.9□□□□□ -0.98
SNRNP70-203ENST00000544278 LRP1Q07954 4544 aaKnown RBP8.88□□□□□ -0.99
SNRNP70-203ENST00000544278 APOBP04114 4563 aaKnown RBP8.87□□□□□ -0.99
SNRNP70-203ENST00000544278 CSAG1Q6PB30 78 aa8.87□□□□□ -0.99
SNRNP70-203ENST00000544278 A0A1B0GU69 56 aa8.86□□□□□ -0.99
SNRNP70-203ENST00000544278 KRTAP16-1A8MUX0 517 aa8.84□□□□□ -0.99
SNRNP70-203ENST00000544278 MYCBP2O75592 4640 aa8.83□□□□□ -1
SNRNP70-203ENST00000544278 LINC00304Q8N9R0 145 aa8.82□□□□□ -1
SNRNP70-203ENST00000544278 SPINK1P00995 79 aa8.82□□□□□ -1
SNRNP70-203ENST00000544278 RYR2Q92736 4967 aa8.81□□□□□ -1
SNRNP70-203ENST00000544278 Q8N1X5 172 aa8.8□□□□□ -1
SNRNP70-203ENST00000544278 FAM229AH3BQW9 127 aa8.8□□□□□ -1
SNRNP70-203ENST00000544278 ACYP2P14621 99 aa8.78□□□□□ -1
SNRNP70-203ENST00000544278 MIR22HGQ0VDD5 57 aa8.77□□□□□ -1.01
SNRNP70-203ENST00000544278 RYR3Q15413 4870 aa8.7□□□□□ -1.02
SNRNP70-203ENST00000544278 UQCR11O14957 56 aa8.69□□□□□ -1.02
SNRNP70-203ENST00000544278 A0A1B0GVY2 172 aa8.68□□□□□ -1.02
SNRNP70-203ENST00000544278 KIAA1109Q2LD37 5005 aa8.67□□□□□ -1.02
SNRNP70-203ENST00000544278 SPATA8Q6RVD6 105 aa8.67□□□□□ -1.02
SNRNP70-203ENST00000544278 DMAC1Q96GE9 116 aa8.66□□□□□ -1.02
SNRNP70-203ENST00000544278 PKHD1L1Q86WI1 4243 aa8.65□□□□□ -1.02
SNRNP70-203ENST00000544278 CRIPTQ9P021 101 aa8.65□□□□□ -1.03
SNRNP70-203ENST00000544278 KRTAP10-4P60372 401 aaPredicted RBP8.63□□□□□ -1.03
SNRNP70-203ENST00000544278 FAT3Q8TDW7 4589 aa8.6□□□□□ -1.03
SNRNP70-203ENST00000544278 KRTAP17-1Q9BYP8 105 aa8.56□□□□□ -1.04
SNRNP70-203ENST00000544278 SEC61BP60468 96 aaKnown RBP8.56□□□□□ -1.04
SNRNP70-203ENST00000544278 HSPG2P98160 4391 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms