RNA–Protein interactions for RNA: ENST00000543216.5

KDM6A-212, Transcript of lysine demethylase 6A, humanhuman

TSL 1 (best) BASIC

Gene KDM6A, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM6A-212ENST00000543216 WDFY4Q6ZS81 3184 aa8.07□□□□□ -1.12
KDM6A-212ENST00000543216 HIVEP1P15822 2718 aa8.05□□□□□ -1.12
KDM6A-212ENST00000543216 ASH1LQ9NR48 2969 aaKnown RBP8.05□□□□□ -1.12
KDM6A-212ENST00000543216 KMT2BQ9UMN6 2715 aaPredicted RBP8.04□□□□□ -1.12
KDM6A-212ENST00000543216 UTP20O75691 2785 aaKnown RBP8.02□□□□□ -1.13
KDM6A-212ENST00000543216 UNC80Q8N2C7 3258 aa8.02□□□□□ -1.13
KDM6A-212ENST00000543216 XIRP2A4UGR9 3374 aa8□□□□□ -1.13
KDM6A-212ENST00000543216 PRUNE2Q8WUY3 3088 aa7.97□□□□□ -1.13
KDM6A-212ENST00000543216 LRBAP50851 2863 aa7.96□□□□□ -1.13
KDM6A-212ENST00000543216 TRANK1O15050 2925 aa7.96□□□□□ -1.13
KDM6A-212ENST00000543216 KRTAP15-1Q3LI76 137 aa7.96□□□□□ -1.13
KDM6A-212ENST00000543216 INE1O15225 51 aa7.94□□□□□ -1.14
KDM6A-212ENST00000543216 VPS13AQ96RL7 3174 aa7.93□□□□□ -1.14
KDM6A-212ENST00000543216 KRTAP3-1Q9BYR8 98 aa7.93□□□□□ -1.14
KDM6A-212ENST00000543216 DSPP15924 2871 aaKnown RBP7.93□□□□□ -1.14
KDM6A-212ENST00000543216 TGP01266 2768 aa7.89□□□□□ -1.15
KDM6A-212ENST00000543216 DMXL2Q8TDJ6 3036 aa7.89□□□□□ -1.15
KDM6A-212ENST00000543216 CELSR3Q9NYQ7 3312 aa7.88□□□□□ -1.15
KDM6A-212ENST00000543216 KRTAP21-3Q3LHN1 58 aa7.84□□□□□ -1.15
KDM6A-212ENST00000543216 TACC2O95359 2948 aa7.83□□□□□ -1.16
KDM6A-212ENST00000543216 LAMA1P25391 3075 aa7.83□□□□□ -1.16
KDM6A-212ENST00000543216 KRTAP10-6P60371 365 aaPredicted RBP7.8□□□□□ -1.16
KDM6A-212ENST00000543216 NBEAQ8NFP9 2946 aa7.78□□□□□ -1.16
KDM6A-212ENST00000543216 CDH23Q9H251 3354 aa7.78□□□□□ -1.16
KDM6A-212ENST00000543216 NIPBLQ6KC79 2804 aaeCLIP7.76□□□□□ -1.17
KDM6A-212ENST00000543216 CELSR2Q9HCU4 2923 aa7.7□□□□□ -1.18
KDM6A-212ENST00000543216 DNAH14Q0VDD8 3507 aa7.69□□□□□ -1.18
KDM6A-212ENST00000543216 VCANP13611 3396 aa7.69□□□□□ -1.18
KDM6A-212ENST00000543216 ATMQ13315 3056 aa7.68□□□□□ -1.18
KDM6A-212ENST00000543216 CRYBG3Q68DQ2 2970 aa7.65□□□□□ -1.18
KDM6A-212ENST00000543216 COL12A1Q99715 3063 aa7.65□□□□□ -1.19
KDM6A-212ENST00000543216 TENM4Q6N022 2769 aa7.63□□□□□ -1.19
KDM6A-212ENST00000543216 FRYLO94915 3013 aa7.61□□□□□ -1.19
KDM6A-212ENST00000543216 ADGRG4Q8IZF6 3080 aa7.61□□□□□ -1.19
KDM6A-212ENST00000543216 DCHS2Q6V1P9 2916 aa7.58□□□□□ -1.2
KDM6A-212ENST00000543216 ZZEF1O43149 2961 aa7.58□□□□□ -1.2
KDM6A-212ENST00000543216 REV3LO60673 3130 aa7.57□□□□□ -1.2
KDM6A-212ENST00000543216 FLNCQ14315 2725 aa7.55□□□□□ -1.2
KDM6A-212ENST00000543216 TENM3Q9P273 2699 aa7.55□□□□□ -1.2
KDM6A-212ENST00000543216 SZT2Q5T011 3432 aa7.54□□□□□ -1.2
KDM6A-212ENST00000543216 BOD1L1Q8NFC6 3051 aa7.54□□□□□ -1.2
KDM6A-212ENST00000543216 CFAP47Q6ZTR5 3102 aa7.52□□□□□ -1.21
KDM6A-212ENST00000543216 TENM2Q9NT68 2774 aa7.48□□□□□ -1.21
KDM6A-212ENST00000543216 COL6A3P12111 3177 aa7.48□□□□□ -1.21
KDM6A-212ENST00000543216 TENM1Q9UKZ4 2725 aa7.48□□□□□ -1.21
KDM6A-212ENST00000543216 KRTAP3-2Q9BYR7 98 aa7.46□□□□□ -1.22
KDM6A-212ENST00000543216 NF1P21359 2839 aa7.42□□□□□ -1.22
KDM6A-212ENST00000543216 CRCT1Q9UGL9 99 aa7.41□□□□□ -1.22
KDM6A-212ENST00000543216 KRTAP10-12P60413 245 aa7.4□□□□□ -1.23
KDM6A-212ENST00000543216 KRTAP3-3Q9BYR6 98 aa7.37□□□□□ -1.23
KDM6A-212ENST00000543216 SPEGQ15772 3267 aa7.36□□□□□ -1.23
KDM6A-212ENST00000543216 TNRC18O15417 2968 aaPredicted RBP7.34□□□□□ -1.23
KDM6A-212ENST00000543216 ZANQ9Y493 2812 aa7.31□□□□□ -1.24
KDM6A-212ENST00000543216 PDZD2O15018 2839 aa7.3□□□□□ -1.24
KDM6A-212ENST00000543216 HRNRQ86YZ3 2850 aaPredicted RBP7.28□□□□□ -1.24
KDM6A-212ENST00000543216 FBN2P35556 2912 aa7.27□□□□□ -1.25
KDM6A-212ENST00000543216 KRTAP12-3P60328 96 aa7.26□□□□□ -1.25
KDM6A-212ENST00000543216 CELSR1Q9NYQ6 3014 aa7.25□□□□□ -1.25
KDM6A-212ENST00000543216 EYSQ5T1H1 3165 aa7.24□□□□□ -1.25
KDM6A-212ENST00000543216 KRTAP23-1A1A580 65 aa7.24□□□□□ -1.25
KDM6A-212ENST00000543216 LCE3AQ5TA76 89 aa7.18□□□□□ -1.26
KDM6A-212ENST00000543216 DMXL1Q9Y485 3027 aa7.13□□□□□ -1.27
KDM6A-212ENST00000543216 SPTBN5Q9NRC6 3674 aaKnown RBP7.09□□□□□ -1.27
KDM6A-212ENST00000543216 USP34Q70CQ2 3546 aa7.08□□□□□ -1.28
KDM6A-212ENST00000543216 LOC400499M0QZD8 3231 aa7.08□□□□□ -1.28
KDM6A-212ENST00000543216 MYO15AQ9UKN7 3530 aa7.04□□□□□ -1.28
KDM6A-212ENST00000543216 MXRA5Q9NR99 2828 aa7.04□□□□□ -1.28
KDM6A-212ENST00000543216 KRTAP10-5P60370 271 aa7.01□□□□□ -1.29
KDM6A-212ENST00000543216 VWFP04275 2813 aa6.99□□□□□ -1.29
KDM6A-212ENST00000543216 MT1HL1P0DM35 61 aa6.99□□□□□ -1.29
KDM6A-212ENST00000543216 PKD1L1Q8TDX9 2849 aa6.98□□□□□ -1.29
KDM6A-212ENST00000543216 LORP23490 312 aaPredicted RBP6.91□□□□□ -1.3
KDM6A-212ENST00000543216 WDFY3Q8IZQ1 3526 aa6.87□□□□□ -1.31
KDM6A-212ENST00000543216 MEGF8Q7Z7M0 2845 aa6.86□□□□□ -1.31
KDM6A-212ENST00000543216 SRRM2Q9UQ35 2752 aaKnown RBP6.84□□□□□ -1.31
KDM6A-212ENST00000543216 DCHS1Q96JQ0 3298 aa6.82□□□□□ -1.32
KDM6A-212ENST00000543216 FBN3Q75N90 2809 aa6.81□□□□□ -1.32
KDM6A-212ENST00000543216 ZFHX4Q86UP3 3567 aa6.79□□□□□ -1.32
KDM6A-212ENST00000543216 RELNP78509 3460 aa6.79□□□□□ -1.32
KDM6A-212ENST00000543216 KRTAP10-4P60372 401 aaPredicted RBP6.72□□□□□ -1.33
KDM6A-212ENST00000543216 ASPMQ8IZT6 3477 aa6.65□□□□□ -1.34
KDM6A-212ENST00000543216 CSMD1Q96PZ7 3565 aa6.64□□□□□ -1.35
KDM6A-212ENST00000543216 KRTAP8-1Q8IUC2 63 aa6.63□□□□□ -1.35
KDM6A-212ENST00000543216 LAMA5O15230 3695 aa6.58□□□□□ -1.36
KDM6A-212ENST00000543216 KRTAP4-5Q9BYR2 181 aa6.55□□□□□ -1.36
KDM6A-212ENST00000543216 COL7A1Q02388 2944 aa6.55□□□□□ -1.36
KDM6A-212ENST00000543216 ANK3Q12955 4377 aaKnown RBP6.48□□□□□ -1.37
KDM6A-212ENST00000543216 SMG1Q96Q15 3661 aaKnown RBP6.47□□□□□ -1.37
KDM6A-212ENST00000543216 FBN1P35555 2871 aaKnown RBP6.47□□□□□ -1.37
KDM6A-212ENST00000543216 ZFHX3Q15911 3703 aa6.45□□□□□ -1.38
KDM6A-212ENST00000543216 CUBNO60494 3623 aa6.44□□□□□ -1.38
KDM6A-212ENST00000543216 NBPF19A0A087WUL8 3843 aa6.42□□□□□ -1.38
KDM6A-212ENST00000543216 SVEP1Q4LDE5 3571 aa6.39□□□□□ -1.39
KDM6A-212ENST00000543216 HUWE1Q7Z6Z7 4374 aaKnown RBP6.35□□□□□ -1.39
KDM6A-212ENST00000543216 DMDP11532 3685 aa6.34□□□□□ -1.39
KDM6A-212ENST00000543216 LCE3CQ5T5A8 94 aa6.33□□□□□ -1.4
KDM6A-212ENST00000543216 KRTAP19-5Q3LI72 72 aa6.3□□□□□ -1.4
KDM6A-212ENST00000543216 ALMS1Q8TCU4 4167 aa6.26□□□□□ -1.41
KDM6A-212ENST00000543216 SPRR2GQ9BYE4 73 aa6.25□□□□□ -1.41
KDM6A-212ENST00000543216 OTOGQ6ZRI0 2925 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms