RNA–Protein interactions for RNA: ENST00000543216.5

KDM6A-212, Transcript of lysine demethylase 6A, humanhuman

TSL 1 (best) BASIC

Gene KDM6A, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM6A-212ENST00000543216 DCAF8L2P0C7V8 631 aa27.16■■□□□ 1.94
KDM6A-212ENST00000543216 PELP1Q8IZL8 1130 aaKnown RBP27.02■■□□□ 1.92
KDM6A-212ENST00000543216 SUPT5HO00267 1087 aaKnown RBP26.38■■□□□ 1.81
KDM6A-212ENST00000543216 ERICH6Q7L0X2 663 aa26.01■■□□□ 1.76
KDM6A-212ENST00000543216 MYT1Q01538 1121 aa25.99■■□□□ 1.75
KDM6A-212ENST00000543216 EHMT2Q96KQ7 1210 aa25.87■■□□□ 1.73
KDM6A-212ENST00000543216 CENPBP07199 599 aaPredicted RBP25.76■■□□□ 1.71
KDM6A-212ENST00000543216 CCER1Q8TC90 406 aaPredicted RBP25.75■■□□□ 1.71
KDM6A-212ENST00000543216 PCGF6Q9BYE7 350 aa25.52■■□□□ 1.68
KDM6A-212ENST00000543216 APLP2Q06481 763 aa25.5■■□□□ 1.67
KDM6A-212ENST00000543216 SHROOM4Q9ULL8 1493 aa25.47■■□□□ 1.67
KDM6A-212ENST00000543216 ZEB1P37275 1124 aaPredicted RBP25.32■■□□□ 1.64
KDM6A-212ENST00000543216 TTBK1Q5TCY1 1321 aaPredicted RBP25.17■■□□□ 1.62
KDM6A-212ENST00000543216 NEFLP07196 543 aa25.12■■□□□ 1.61
KDM6A-212ENST00000543216 YTHDC1Q96MU7 727 aaKnown RBP25.02■■□□□ 1.6
KDM6A-212ENST00000543216 FAM9AQ8IZU1 332 aaPredicted RBP25■■□□□ 1.59
KDM6A-212ENST00000543216 DAXXQ9UER7 740 aaPredicted RBP24.56■■□□□ 1.52
KDM6A-212ENST00000543216 RANGAP1P46060 587 aaPredicted RBP24.49■■□□□ 1.51
KDM6A-212ENST00000543216 NISCHQ9Y2I1 1504 aa24.47■■□□□ 1.51
KDM6A-212ENST00000543216 TRIM41Q8WV44 630 aa24.33■■□□□ 1.49
KDM6A-212ENST00000543216 HRCP23327 699 aa24.33■■□□□ 1.48
KDM6A-212ENST00000543216 ATP1B4Q9UN42 357 aaPredicted RBP24.29■■□□□ 1.48
KDM6A-212ENST00000543216 RTL5Q5HYW3 569 aaPredicted RBP24.22■■□□□ 1.47
KDM6A-212ENST00000543216 TRIM26Q12899 539 aaPredicted RBP24.18■■□□□ 1.46
KDM6A-212ENST00000543216 UBTFP17480 764 aaKnown RBP24.15■■□□□ 1.46
KDM6A-212ENST00000543216 PPARGC1BQ86YN6 1023 aaKnown RBP24.07■■□□□ 1.44
KDM6A-212ENST00000543216 ZNF316A6NFI3 1004 aaPredicted RBP23.99■■□□□ 1.43
KDM6A-212ENST00000543216 POLR3GLQ9BT43 218 aa23.85■■□□□ 1.41
KDM6A-212ENST00000543216 DIEXFQ68CQ4 756 aaKnown RBP23.74■■□□□ 1.39
KDM6A-212ENST00000543216 CLSPNQ9HAW4 1339 aa23.72■■□□□ 1.39
KDM6A-212ENST00000543216 CNGB1Q14028 1251 aaPredicted RBP23.67■■□□□ 1.38
KDM6A-212ENST00000543216 GTF3C3Q9Y5Q9 886 aa23.65■■□□□ 1.38
KDM6A-212ENST00000543216 ITGAEP38570 1179 aa23.64■■□□□ 1.37
KDM6A-212ENST00000543216 BCANQ96GW7 911 aa23.57■■□□□ 1.36
KDM6A-212ENST00000543216 HNRNPUL2Q1KMD3 747 aaKnown RBP23.55■■□□□ 1.36
KDM6A-212ENST00000543216 CDK11AQ9UQ88 783 aaPredicted RBP23.49■■□□□ 1.35
KDM6A-212ENST00000543216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.43■■□□□ 1.34
KDM6A-212ENST00000543216 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
KDM6A-212ENST00000543216 EIF5BO60841 1220 aaKnown RBP23.33■■□□□ 1.33
KDM6A-212ENST00000543216 SLC4A1APQ9BWU0 796 aaKnown RBP23.25■■□□□ 1.31
KDM6A-212ENST00000543216 MYT1LQ9UL68 1186 aa23.23■■□□□ 1.31
KDM6A-212ENST00000543216 ACIN1Q9UKV3 1341 aaKnown RBP23.19■■□□□ 1.3
KDM6A-212ENST00000543216 GLIPR1L2Q4G1C9 344 aa23.17■■□□□ 1.3
KDM6A-212ENST00000543216 ANP32AP39687 249 aaKnown RBP23.15■■□□□ 1.3
KDM6A-212ENST00000543216 CHIC1Q5VXU3 224 aa23.13■■□□□ 1.29
KDM6A-212ENST00000543216 ANP32CO43423 234 aa23.11■■□□□ 1.29
KDM6A-212ENST00000543216 ZBTB47Q9UFB7 747 aaPredicted RBP23.04■■□□□ 1.28
KDM6A-212ENST00000543216 NEUROD1Q13562 356 aa22.97■■□□□ 1.27
KDM6A-212ENST00000543216 NPM2Q86SE8 214 aaKnown RBP22.97■■□□□ 1.27
KDM6A-212ENST00000543216 ANP32BQ92688 251 aaKnown RBP22.92■■□□□ 1.26
KDM6A-212ENST00000543216 CANXP27824 592 aaKnown RBP22.89■■□□□ 1.25
KDM6A-212ENST00000543216 FAM50AQ14320 339 aaKnown RBP22.88■■□□□ 1.25
KDM6A-212ENST00000543216 TRIM52Q96A61 297 aa22.85■■□□□ 1.25
KDM6A-212ENST00000543216 BCL11AQ9H165 835 aa22.8■■□□□ 1.24
KDM6A-212ENST00000543216 FKBP8Q14318 412 aa22.76■■□□□ 1.23
KDM6A-212ENST00000543216 NBR1Q14596 966 aa22.7■■□□□ 1.22
KDM6A-212ENST00000543216 ZNF326Q5BKZ1 582 aaKnown RBP22.7■■□□□ 1.22
KDM6A-212ENST00000543216 HSP90AA1P07900 732 aaKnown RBP22.62■■□□□ 1.21
KDM6A-212ENST00000543216 UPF2Q9HAU5 1272 aaKnown RBP22.55■■□□□ 1.2
KDM6A-212ENST00000543216 SLC24A1O60721 1099 aa22.5■■□□□ 1.19
KDM6A-212ENST00000543216 ARXQ96QS3 562 aa22.5■■□□□ 1.19
KDM6A-212ENST00000543216 NEFMP07197 916 aa22.48■■□□□ 1.19
KDM6A-212ENST00000543216 SCAF1Q9H7N4 1312 aaKnown RBP22.44■■□□□ 1.18
KDM6A-212ENST00000543216 HNRNPUQ00839 825 aaKnown RBP eCLIP22.4■■□□□ 1.18
KDM6A-212ENST00000543216 CCDC136Q96JN2 1154 aa22.36■■□□□ 1.17
KDM6A-212ENST00000543216 ANP32EQ9BTT0 268 aa22.3■■□□□ 1.16
KDM6A-212ENST00000543216 TNNT2P45379 298 aaPredicted RBP22.28■■□□□ 1.16
KDM6A-212ENST00000543216 FAM9BQ8IZU0 186 aa22.27■■□□□ 1.16
KDM6A-212ENST00000543216 TRIM44Q96DX7 344 aaPredicted RBP22.22■■□□□ 1.15
KDM6A-212ENST00000543216 DDX10Q13206 875 aaKnown RBP22.19■■□□□ 1.14
KDM6A-212ENST00000543216 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.17■■□□□ 1.14
KDM6A-212ENST00000543216 DDRGK1Q96HY6 314 aa22.14■■□□□ 1.13
KDM6A-212ENST00000543216 SALL2Q9Y467 1007 aaPredicted RBP22.13■■□□□ 1.13
KDM6A-212ENST00000543216 IRX6P78412 446 aaPredicted RBP22.11■■□□□ 1.13
KDM6A-212ENST00000543216 TONSLQ96HA7 1378 aa22.07■■□□□ 1.12
KDM6A-212ENST00000543216 ERICH6BQ5W0A0 696 aa22.06■■□□□ 1.12
KDM6A-212ENST00000543216 BECN1Q14457 450 aa22.05■■□□□ 1.12
KDM6A-212ENST00000543216 RTN4Q9NQC3 1192 aaKnown RBP22.05■■□□□ 1.12
KDM6A-212ENST00000543216 NAP1L5Q96NT1 182 aaPredicted RBP22.04■■□□□ 1.12
KDM6A-212ENST00000543216 TMC1Q8TDI8 760 aa22.01■■□□□ 1.11
KDM6A-212ENST00000543216 MIER1Q8N108 512 aa22.01■■□□□ 1.11
KDM6A-212ENST00000543216 NCLP19338 710 aaKnown RBP21.97■■□□□ 1.11
KDM6A-212ENST00000543216 GOLGA6L22H0YM25 854 aa21.96■■□□□ 1.11
KDM6A-212ENST00000543216 MRS2Q9HD23 443 aa21.95■■□□□ 1.1
KDM6A-212ENST00000543216 CDK11BP21127 795 aaKnown RBP21.95■■□□□ 1.1
KDM6A-212ENST00000543216 PTMAP06454 111 aaKnown RBP21.94■■□□□ 1.1
KDM6A-212ENST00000543216 PPM1GO15355 546 aaPredicted RBP21.93■■□□□ 1.1
KDM6A-212ENST00000543216 DNTTIP2Q5QJE6 756 aaKnown RBP21.93■■□□□ 1.1
KDM6A-212ENST00000543216 WDR43Q15061 677 aaKnown RBP eCLIP21.89■■□□□ 1.09
KDM6A-212ENST00000543216 P3H3Q8IVL6 736 aa21.84■■□□□ 1.09
KDM6A-212ENST00000543216 DCAF1Q9Y4B6 1507 aa21.84■■□□□ 1.09
KDM6A-212ENST00000543216 MYH16Q9H6N6 1097 aa21.84■■□□□ 1.09
KDM6A-212ENST00000543216 ZNF777Q9ULD5 760 aaPredicted RBP21.82■■□□□ 1.08
KDM6A-212ENST00000543216 LAS1LQ9Y4W2 734 aaKnown RBP21.81■■□□□ 1.08
KDM6A-212ENST00000543216 ARID3CA6NKF2 412 aa21.8■■□□□ 1.08
KDM6A-212ENST00000543216 NOP58Q9Y2X3 529 aaKnown RBP21.8■■□□□ 1.08
KDM6A-212ENST00000543216 CSRNP3Q8WYN3 585 aa21.77■■□□□ 1.08
KDM6A-212ENST00000543216 DEKP35659 375 aaKnown RBP21.7■■□□□ 1.06
KDM6A-212ENST00000543216 ZRSR1Q15695 479 aaKnown RBP21.69■■□□□ 1.06
KDM6A-212ENST00000543216 AMER1Q5JTC6 1135 aaPredicted RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms