RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 COL6A5A8TX70 2615 aa7.38□□□□□ -1.23
TRPM1-203ENST00000542188 LRBAP50851 2863 aa7.37□□□□□ -1.23
TRPM1-203ENST00000542188 ADGRG4Q8IZF6 3080 aa7.36□□□□□ -1.23
TRPM1-203ENST00000542188 TEP1Q99973 2627 aaKnown RBP7.35□□□□□ -1.23
TRPM1-203ENST00000542188 BOD1L1Q8NFC6 3051 aa7.35□□□□□ -1.23
TRPM1-203ENST00000542188 REV3LO60673 3130 aa7.34□□□□□ -1.24
TRPM1-203ENST00000542188 ASH1LQ9NR48 2969 aaKnown RBP7.33□□□□□ -1.24
TRPM1-203ENST00000542188 BAHCC1Q9P281 2608 aa7.33□□□□□ -1.24
TRPM1-203ENST00000542188 DMXL2Q8TDJ6 3036 aa7.33□□□□□ -1.24
TRPM1-203ENST00000542188 UBR5O95071 2799 aaPredicted RBP7.32□□□□□ -1.24
TRPM1-203ENST00000542188 KRTAP10-10P60014 251 aa7.3□□□□□ -1.24
TRPM1-203ENST00000542188 ATMQ13315 3056 aa7.29□□□□□ -1.24
TRPM1-203ENST00000542188 SPEGQ15772 3267 aa7.27□□□□□ -1.25
TRPM1-203ENST00000542188 TACC2O95359 2948 aa7.26□□□□□ -1.25
TRPM1-203ENST00000542188 TPRXLQ17RH7 258 aa7.25□□□□□ -1.25
TRPM1-203ENST00000542188 CFAP47Q6ZTR5 3102 aa7.25□□□□□ -1.25
TRPM1-203ENST00000542188 IGSF10Q6WRI0 2623 aa7.24□□□□□ -1.25
TRPM1-203ENST00000542188 APCP25054 2843 aa7.23□□□□□ -1.25
TRPM1-203ENST00000542188 KRTAP1-4P0C5Y4 121 aa7.22□□□□□ -1.25
TRPM1-203ENST00000542188 STAB2Q8WWQ8 2551 aa7.22□□□□□ -1.25
TRPM1-203ENST00000542188 ZZEF1O43149 2961 aa7.2□□□□□ -1.26
TRPM1-203ENST00000542188 COL12A1Q99715 3063 aa7.19□□□□□ -1.26
TRPM1-203ENST00000542188 NSD1Q96L73 2696 aaPredicted RBP7.16□□□□□ -1.26
TRPM1-203ENST00000542188 UTP20O75691 2785 aaKnown RBP7.16□□□□□ -1.26
TRPM1-203ENST00000542188 KRTAP13-4Q3LI77 160 aa7.14□□□□□ -1.27
TRPM1-203ENST00000542188 KRTAP12-2P59991 146 aa7.14□□□□□ -1.27
TRPM1-203ENST00000542188 HIVEP1P15822 2718 aa7.13□□□□□ -1.27
TRPM1-203ENST00000542188 ITPR2Q14571 2701 aa7.12□□□□□ -1.27
TRPM1-203ENST00000542188 FLNCQ14315 2725 aa7.1□□□□□ -1.27
TRPM1-203ENST00000542188 SPTBN5Q9NRC6 3674 aaKnown RBP7.09□□□□□ -1.27
TRPM1-203ENST00000542188 USP34Q70CQ2 3546 aa7.06□□□□□ -1.28
TRPM1-203ENST00000542188 KRTAP13-3Q3SY46 172 aa7.06□□□□□ -1.28
TRPM1-203ENST00000542188 CELSR2Q9HCU4 2923 aa7.03□□□□□ -1.28
TRPM1-203ENST00000542188 INE1O15225 51 aa7.02□□□□□ -1.29
TRPM1-203ENST00000542188 MYO15AQ9UKN7 3530 aa7□□□□□ -1.29
TRPM1-203ENST00000542188 EYSQ5T1H1 3165 aa6.97□□□□□ -1.29
TRPM1-203ENST00000542188 TNRC18O15417 2968 aaPredicted RBP6.96□□□□□ -1.29
TRPM1-203ENST00000542188 KRTAP15-1Q3LI76 137 aa6.96□□□□□ -1.3
TRPM1-203ENST00000542188 LOC400499M0QZD8 3231 aa6.95□□□□□ -1.3
TRPM1-203ENST00000542188 ZANQ9Y493 2812 aa6.95□□□□□ -1.3
TRPM1-203ENST00000542188 DMXL1Q9Y485 3027 aa6.95□□□□□ -1.3
TRPM1-203ENST00000542188 KRTAP12-1P59990 96 aa6.94□□□□□ -1.3
TRPM1-203ENST00000542188 KRTAP21-3Q3LHN1 58 aa6.93□□□□□ -1.3
TRPM1-203ENST00000542188 NIPBLQ6KC79 2804 aaeCLIP6.93□□□□□ -1.3
TRPM1-203ENST00000542188 HRNRQ86YZ3 2850 aaPredicted RBP6.93□□□□□ -1.3
TRPM1-203ENST00000542188 DCHS2Q6V1P9 2916 aa6.91□□□□□ -1.3
TRPM1-203ENST00000542188 KMT2BQ9UMN6 2715 aaPredicted RBP6.89□□□□□ -1.31
TRPM1-203ENST00000542188 CRYBG3Q68DQ2 2970 aa6.88□□□□□ -1.31
TRPM1-203ENST00000542188 FBN2P35556 2912 aa6.87□□□□□ -1.31
TRPM1-203ENST00000542188 WDFY3Q8IZQ1 3526 aa6.85□□□□□ -1.31
TRPM1-203ENST00000542188 DCHS1Q96JQ0 3298 aa6.76□□□□□ -1.33
TRPM1-203ENST00000542188 NF1P21359 2839 aa6.76□□□□□ -1.33
TRPM1-203ENST00000542188 ZFHX4Q86UP3 3567 aa6.7□□□□□ -1.34
TRPM1-203ENST00000542188 CSMD1Q96PZ7 3565 aa6.67□□□□□ -1.34
TRPM1-203ENST00000542188 RELNP78509 3460 aa6.66□□□□□ -1.34
TRPM1-203ENST00000542188 TGP01266 2768 aa6.65□□□□□ -1.35
TRPM1-203ENST00000542188 CELSR1Q9NYQ6 3014 aa6.64□□□□□ -1.35
TRPM1-203ENST00000542188 TENM4Q6N022 2769 aa6.63□□□□□ -1.35
TRPM1-203ENST00000542188 ASPMQ8IZT6 3477 aa6.61□□□□□ -1.35
TRPM1-203ENST00000542188 MXRA5Q9NR99 2828 aa6.61□□□□□ -1.35
TRPM1-203ENST00000542188 KRTAP3-1Q9BYR8 98 aa6.58□□□□□ -1.36
TRPM1-203ENST00000542188 TENM3Q9P273 2699 aa6.53□□□□□ -1.36
TRPM1-203ENST00000542188 KRTAP10-6P60371 365 aaPredicted RBP6.51□□□□□ -1.37
TRPM1-203ENST00000542188 SMG1Q96Q15 3661 aaKnown RBP6.5□□□□□ -1.37
TRPM1-203ENST00000542188 LAMA5O15230 3695 aa6.48□□□□□ -1.37
TRPM1-203ENST00000542188 TENM1Q9UKZ4 2725 aa6.48□□□□□ -1.37
TRPM1-203ENST00000542188 KRTAP10-12P60413 245 aa6.43□□□□□ -1.38
TRPM1-203ENST00000542188 PDZD2O15018 2839 aa6.42□□□□□ -1.38
TRPM1-203ENST00000542188 CRCT1Q9UGL9 99 aa6.41□□□□□ -1.38
TRPM1-203ENST00000542188 SVEP1Q4LDE5 3571 aa6.37□□□□□ -1.39
TRPM1-203ENST00000542188 TENM2Q9NT68 2774 aa6.36□□□□□ -1.39
TRPM1-203ENST00000542188 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.39
TRPM1-203ENST00000542188 DMDP11532 3685 aa6.33□□□□□ -1.4
TRPM1-203ENST00000542188 CUBNO60494 3623 aa6.29□□□□□ -1.4
TRPM1-203ENST00000542188 PKD1L1Q8TDX9 2849 aa6.27□□□□□ -1.41
TRPM1-203ENST00000542188 KRTAP12-3P60328 96 aa6.27□□□□□ -1.41
TRPM1-203ENST00000542188 VWFP04275 2813 aa6.25□□□□□ -1.41
TRPM1-203ENST00000542188 NBPF19A0A087WUL8 3843 aa6.22□□□□□ -1.41
TRPM1-203ENST00000542188 KRTAP3-2Q9BYR7 98 aa6.2□□□□□ -1.42
TRPM1-203ENST00000542188 FBN1P35555 2871 aaKnown RBP6.17□□□□□ -1.42
TRPM1-203ENST00000542188 SPENQ96T58 3664 aaKnown RBP6.12□□□□□ -1.43
TRPM1-203ENST00000542188 LCE3AQ5TA76 89 aa6.12□□□□□ -1.43
TRPM1-203ENST00000542188 KRTAP3-3Q9BYR6 98 aa6.12□□□□□ -1.43
TRPM1-203ENST00000542188 KRTAP10-5P60370 271 aa6.1□□□□□ -1.43
TRPM1-203ENST00000542188 FBN3Q75N90 2809 aa6.09□□□□□ -1.43
TRPM1-203ENST00000542188 MUC3AQ02505 3323 aa6.08□□□□□ -1.44
TRPM1-203ENST00000542188 SRRM2Q9UQ35 2752 aaKnown RBP6.07□□□□□ -1.44
TRPM1-203ENST00000542188 ANK3Q12955 4377 aaKnown RBP6.04□□□□□ -1.44
TRPM1-203ENST00000542188 MEGF8Q7Z7M0 2845 aa6.04□□□□□ -1.44
TRPM1-203ENST00000542188 CSMD2Q7Z408 3487 aa6.03□□□□□ -1.44
TRPM1-203ENST00000542188 ZFHX3Q15911 3703 aa5.98□□□□□ -1.45
TRPM1-203ENST00000542188 OTOGQ6ZRI0 2925 aa5.96□□□□□ -1.46
TRPM1-203ENST00000542188 TRRAPQ9Y4A5 3859 aa5.96□□□□□ -1.46
TRPM1-203ENST00000542188 BSNQ9UPA5 3926 aa5.88□□□□□ -1.47
TRPM1-203ENST00000542188 COL7A1Q02388 2944 aa5.87□□□□□ -1.47
TRPM1-203ENST00000542188 MT1HL1P0DM35 61 aa5.86□□□□□ -1.47
TRPM1-203ENST00000542188 VPS13CQ709C8 3753 aa5.86□□□□□ -1.47
TRPM1-203ENST00000542188 KRTAP8-1Q8IUC2 63 aa5.83□□□□□ -1.48
TRPM1-203ENST00000542188 HUWE1Q7Z6Z7 4374 aaKnown RBP5.75□□□□□ -1.49
TRPM1-203ENST00000542188 CSMD3Q7Z407 3707 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms