RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 ZFHX4Q86UP3 3567 aa7.13□□□□□ -1.27
EIF3A-203ENST00000541549 TENM3Q9P273 2699 aa7.12□□□□□ -1.27
EIF3A-203ENST00000541549 HRNRQ86YZ3 2850 aaPredicted RBP7.12□□□□□ -1.27
EIF3A-203ENST00000541549 J3QL48 77 aa7.12□□□□□ -1.27
EIF3A-203ENST00000541549 LUZP6Q538Z0 58 aa7.11□□□□□ -1.27
EIF3A-203ENST00000541549 KRTAP11-1Q8IUC1 163 aa7.1□□□□□ -1.27
EIF3A-203ENST00000541549 LCE6AA0A183 80 aa7.09□□□□□ -1.27
EIF3A-203ENST00000541549 KRTAP7-1Q8IUC3 87 aa7.09□□□□□ -1.27
EIF3A-203ENST00000541549 LINC00483Q53H64 154 aa7.08□□□□□ -1.28
EIF3A-203ENST00000541549 Q6ZSA8 131 aa7.06□□□□□ -1.28
EIF3A-203ENST00000541549 MXRA5Q9NR99 2828 aa7.05□□□□□ -1.28
EIF3A-203ENST00000541549 A6NN06 94 aa7.04□□□□□ -1.28
EIF3A-203ENST00000541549 CAMK2N1Q7Z7J9 78 aa7.04□□□□□ -1.28
EIF3A-203ENST00000541549 KRTAP10-2P60368 255 aa7.02□□□□□ -1.29
EIF3A-203ENST00000541549 RPL37P61927 97 aaKnown RBP7.02□□□□□ -1.29
EIF3A-203ENST00000541549 CELSR1Q9NYQ6 3014 aa7.02□□□□□ -1.29
EIF3A-203ENST00000541549 SPATA8Q6RVD6 105 aa7.01□□□□□ -1.29
EIF3A-203ENST00000541549 ADM2Q7Z4H4 148 aa7.01□□□□□ -1.29
EIF3A-203ENST00000541549 KRTAP10-1P60331 282 aa7□□□□□ -1.29
EIF3A-203ENST00000541549 MUC3AQ02505 3323 aa6.99□□□□□ -1.29
EIF3A-203ENST00000541549 S4R3F8 94 aa6.99□□□□□ -1.29
EIF3A-203ENST00000541549 H1FX-AS1Q4G0G2 97 aa6.98□□□□□ -1.29
EIF3A-203ENST00000541549 RELNP78509 3460 aa6.98□□□□□ -1.29
EIF3A-203ENST00000541549 CUBNO60494 3623 aa6.97□□□□□ -1.29
EIF3A-203ENST00000541549 ROMO1P60602 79 aa6.96□□□□□ -1.29
EIF3A-203ENST00000541549 CSMD1Q96PZ7 3565 aa6.95□□□□□ -1.3
EIF3A-203ENST00000541549 LAMA5O15230 3695 aa6.95□□□□□ -1.3
EIF3A-203ENST00000541549 ASB16-AS1Q495Z4 193 aa6.94□□□□□ -1.3
EIF3A-203ENST00000541549 DMDP11532 3685 aa6.94□□□□□ -1.3
EIF3A-203ENST00000541549 R4GN34 69 aa6.93□□□□□ -1.3
EIF3A-203ENST00000541549 PDZD2O15018 2839 aa6.92□□□□□ -1.3
EIF3A-203ENST00000541549 TENM1Q9UKZ4 2725 aa6.9□□□□□ -1.3
EIF3A-203ENST00000541549 SMG1Q96Q15 3661 aaKnown RBP6.88□□□□□ -1.31
EIF3A-203ENST00000541549 PKD1L1Q8TDX9 2849 aa6.88□□□□□ -1.31
EIF3A-203ENST00000541549 Q6ZRN7 208 aaPredicted RBP6.86□□□□□ -1.31
EIF3A-203ENST00000541549 KRTAP13-1Q8IUC0 172 aa6.86□□□□□ -1.31
EIF3A-203ENST00000541549 KRTAP25-1Q3LHN0 102 aa6.82□□□□□ -1.32
EIF3A-203ENST00000541549 SVEP1Q4LDE5 3571 aa6.82□□□□□ -1.32
EIF3A-203ENST00000541549 M0QZ58 72 aa6.81□□□□□ -1.32
EIF3A-203ENST00000541549 A0A0A0MQY5 61 aa6.8□□□□□ -1.32
EIF3A-203ENST00000541549 KRTAP13-2Q52LG2 175 aa6.8□□□□□ -1.32
EIF3A-203ENST00000541549 TGP01266 2768 aa6.8□□□□□ -1.32
EIF3A-203ENST00000541549 SPENQ96T58 3664 aaKnown RBP6.77□□□□□ -1.33
EIF3A-203ENST00000541549 VWFP04275 2813 aa6.77□□□□□ -1.33
EIF3A-203ENST00000541549 FBN1P35555 2871 aaKnown RBP6.75□□□□□ -1.33
EIF3A-203ENST00000541549 Q5VSD8 79 aa6.74□□□□□ -1.33
EIF3A-203ENST00000541549 M0R2T5 61 aa6.74□□□□□ -1.33
EIF3A-203ENST00000541549 SRRM2Q9UQ35 2752 aaKnown RBP6.69□□□□□ -1.34
EIF3A-203ENST00000541549 NDUFAF8A1L188 74 aa6.69□□□□□ -1.34
EIF3A-203ENST00000541549 SEC61BP60468 96 aaKnown RBP6.67□□□□□ -1.34
EIF3A-203ENST00000541549 TENM2Q9NT68 2774 aa6.65□□□□□ -1.34
EIF3A-203ENST00000541549 KRTAP16-1A8MUX0 517 aa6.65□□□□□ -1.34
EIF3A-203ENST00000541549 A8MUU9 505 aa6.62□□□□□ -1.35
EIF3A-203ENST00000541549 RPS29P62273 56 aaKnown RBP6.62□□□□□ -1.35
EIF3A-203ENST00000541549 H0YAA0 97 aa6.51□□□□□ -1.37
EIF3A-203ENST00000541549 C10orf95Q9H7T3 257 aa6.51□□□□□ -1.37
EIF3A-203ENST00000541549 C20orf166-AS1Q96NR2 134 aa6.5□□□□□ -1.37
EIF3A-203ENST00000541549 KRTAP1-4P0C5Y4 121 aa6.47□□□□□ -1.37
EIF3A-203ENST00000541549 PLAC4Q8WY50 150 aa6.45□□□□□ -1.38
EIF3A-203ENST00000541549 OTOGQ6ZRI0 2925 aa6.44□□□□□ -1.38
EIF3A-203ENST00000541549 FBN3Q75N90 2809 aa6.42□□□□□ -1.38
EIF3A-203ENST00000541549 ZFHX3Q15911 3703 aa6.37□□□□□ -1.39
EIF3A-203ENST00000541549 CSMD2Q7Z408 3487 aa6.33□□□□□ -1.4
EIF3A-203ENST00000541549 KRTAP13-3Q3SY46 172 aa6.33□□□□□ -1.4
EIF3A-203ENST00000541549 COL7A1Q02388 2944 aa6.33□□□□□ -1.4
EIF3A-203ENST00000541549 BSNQ9UPA5 3926 aa6.32□□□□□ -1.4
EIF3A-203ENST00000541549 MEGF8Q7Z7M0 2845 aa6.3□□□□□ -1.4
EIF3A-203ENST00000541549 TNP1P09430 55 aa6.29□□□□□ -1.4
EIF3A-203ENST00000541549 P0C880 135 aa6.29□□□□□ -1.4
EIF3A-203ENST00000541549 XP32Q5T750 250 aa6.29□□□□□ -1.4
EIF3A-203ENST00000541549 NBPF19A0A087WUL8 3843 aa6.25□□□□□ -1.41
EIF3A-203ENST00000541549 KRTAP10-8P60410 259 aa6.22□□□□□ -1.41
EIF3A-203ENST00000541549 PP632Q6XCG6 107 aa6.16□□□□□ -1.42
EIF3A-203ENST00000541549 A0A1B0GVY2 172 aa6.09□□□□□ -1.43
EIF3A-203ENST00000541549 TRRAPQ9Y4A5 3859 aa6.09□□□□□ -1.44
EIF3A-203ENST00000541549 KRTAP12-2P59991 146 aa6.05□□□□□ -1.44
EIF3A-203ENST00000541549 VPS13CQ709C8 3753 aa6.03□□□□□ -1.44
EIF3A-203ENST00000541549 KRTAP3-1Q9BYR8 98 aa6.03□□□□□ -1.44
EIF3A-203ENST00000541549 TPRXLQ17RH7 258 aa6.02□□□□□ -1.45
EIF3A-203ENST00000541549 KRTAP12-1P59990 96 aa5.95□□□□□ -1.46
EIF3A-203ENST00000541549 KRTAP21-3Q3LHN1 58 aa5.9□□□□□ -1.46
EIF3A-203ENST00000541549 KRTAP13-4Q3LI77 160 aa5.9□□□□□ -1.46
EIF3A-203ENST00000541549 ANK3Q12955 4377 aaKnown RBP5.88□□□□□ -1.47
EIF3A-203ENST00000541549 KRTAP10-6P60371 365 aaPredicted RBP5.87□□□□□ -1.47
EIF3A-203ENST00000541549 KRTAP10-10P60014 251 aa5.85□□□□□ -1.47
EIF3A-203ENST00000541549 CSMD3Q7Z407 3707 aa5.79□□□□□ -1.48
EIF3A-203ENST00000541549 ZNF469Q96JG9 3925 aaPredicted RBP5.79□□□□□ -1.48
EIF3A-203ENST00000541549 KRTAP3-2Q9BYR7 98 aa5.66□□□□□ -1.5
EIF3A-203ENST00000541549 AKAP9Q99996 3911 aa5.66□□□□□ -1.5
EIF3A-203ENST00000541549 PRO2289Q9P1D8 64 aa5.64□□□□□ -1.51
EIF3A-203ENST00000541549 KRTAP3-3Q9BYR6 98 aa5.64□□□□□ -1.51
EIF3A-203ENST00000541549 KRTAP15-1Q3LI76 137 aa5.63□□□□□ -1.51
EIF3A-203ENST00000541549 MT1HL1P0DM35 61 aa5.46□□□□□ -1.53
EIF3A-203ENST00000541549 HUWE1Q7Z6Z7 4374 aaKnown RBP5.42□□□□□ -1.54
EIF3A-203ENST00000541549 KRTAP10-4P60372 401 aaPredicted RBP5.41□□□□□ -1.54
EIF3A-203ENST00000541549 LORP23490 312 aaPredicted RBP5.31□□□□□ -1.56
EIF3A-203ENST00000541549 DNAH5Q8TE73 4624 aa5.26□□□□□ -1.57
EIF3A-203ENST00000541549 DNAH11Q96DT5 4516 aa5.25□□□□□ -1.57
EIF3A-203ENST00000541549 DNAH9Q9NYC9 4486 aa5.24□□□□□ -1.57
EIF3A-203ENST00000541549 INE1O15225 51 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms