RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 ANK2Q01484 3957 aa7.84□□□□□ -1.15
MSH6-210ENST00000540021 A0A087WTM6 91 aa7.83□□□□□ -1.16
MSH6-210ENST00000540021 C7orf65Q6ZTY9 151 aa7.83□□□□□ -1.16
MSH6-210ENST00000540021 CSMD3Q7Z407 3707 aa7.82□□□□□ -1.16
MSH6-210ENST00000540021 LINC01558Q9Y6Z2 57 aa7.81□□□□□ -1.16
MSH6-210ENST00000540021 COL7A1Q02388 2944 aa7.81□□□□□ -1.16
MSH6-210ENST00000540021 C1orf134Q5TEV5 83 aa7.81□□□□□ -1.16
MSH6-210ENST00000540021 PRAC1Q96KF2 57 aa7.79□□□□□ -1.16
MSH6-210ENST00000540021 WWC2-AS2Q96NR7 200 aa7.76□□□□□ -1.17
MSH6-210ENST00000540021 FAM229AH3BQW9 127 aa7.75□□□□□ -1.17
MSH6-210ENST00000540021 Q5W150 140 aa7.74□□□□□ -1.17
MSH6-210ENST00000540021 IGLV7-43P04211 117 aa7.72□□□□□ -1.17
MSH6-210ENST00000540021 TGP01266 2768 aa7.71□□□□□ -1.17
MSH6-210ENST00000540021 MIR22HGQ0VDD5 57 aa7.71□□□□□ -1.17
MSH6-210ENST00000540021 Q6ZR54 194 aa7.71□□□□□ -1.17
MSH6-210ENST00000540021 C8orf87E5RJ46 101 aa7.71□□□□□ -1.18
MSH6-210ENST00000540021 Q96NJ1 140 aa7.71□□□□□ -1.18
MSH6-210ENST00000540021 UQCR11O14957 56 aa7.7□□□□□ -1.18
MSH6-210ENST00000540021 Q8N1X5 172 aa7.67□□□□□ -1.18
MSH6-210ENST00000540021 SSBP3-AS1Q7Z2R9 100 aa7.66□□□□□ -1.18
MSH6-210ENST00000540021 A6NN06 94 aa7.66□□□□□ -1.18
MSH6-210ENST00000540021 CMYA5Q8N3K9 4069 aa7.65□□□□□ -1.19
MSH6-210ENST00000540021 KRTAP13-1Q8IUC0 172 aa7.64□□□□□ -1.19
MSH6-210ENST00000540021 LINC00483Q53H64 154 aa7.62□□□□□ -1.19
MSH6-210ENST00000540021 DMBT1Q9UGM3 2413 aaPredicted RBP7.62□□□□□ -1.19
MSH6-210ENST00000540021 TYMSOSQ8TAI1 123 aa7.61□□□□□ -1.19
MSH6-210ENST00000540021 PLA2G1BP04054 148 aaKnown RBP7.61□□□□□ -1.19
MSH6-210ENST00000540021 ADM2Q7Z4H4 148 aa7.6□□□□□ -1.19
MSH6-210ENST00000540021 PLAC8Q9NZF1 115 aa7.6□□□□□ -1.19
MSH6-210ENST00000540021 Q6ZRN7 208 aaPredicted RBP7.59□□□□□ -1.2
MSH6-210ENST00000540021 FLG2Q5D862 2391 aaPredicted RBP7.56□□□□□ -1.2
MSH6-210ENST00000540021 LYSTQ99698 3801 aa7.56□□□□□ -1.2
MSH6-210ENST00000540021 C9orf92A6NGG3 77 aa7.55□□□□□ -1.2
MSH6-210ENST00000540021 DMAC1Q96GE9 116 aa7.54□□□□□ -1.2
MSH6-210ENST00000540021 K7ERS5 55 aa7.53□□□□□ -1.2
MSH6-210ENST00000540021 FBN3Q75N90 2809 aa7.53□□□□□ -1.2
MSH6-210ENST00000540021 LINC01554Q52M75 96 aa7.5□□□□□ -1.21
MSH6-210ENST00000540021 CSAG1Q6PB30 78 aa7.49□□□□□ -1.21
MSH6-210ENST00000540021 ASB16-AS1Q495Z4 193 aa7.49□□□□□ -1.21
MSH6-210ENST00000540021 KRTAP10-2P60368 255 aa7.48□□□□□ -1.21
MSH6-210ENST00000540021 SMR3BP02814 79 aaPredicted RBP7.47□□□□□ -1.21
MSH6-210ENST00000540021 DNAH3Q8TD57 4116 aa7.46□□□□□ -1.22
MSH6-210ENST00000540021 DNAH10Q8IVF4 4471 aa7.44□□□□□ -1.22
MSH6-210ENST00000540021 LINC00304Q8N9R0 145 aa7.42□□□□□ -1.22
MSH6-210ENST00000540021 CRIPTQ9P021 101 aa7.41□□□□□ -1.22
MSH6-210ENST00000540021 DNAH1Q9P2D7 4330 aa7.4□□□□□ -1.22
MSH6-210ENST00000540021 MEGF8Q7Z7M0 2845 aa7.4□□□□□ -1.23
MSH6-210ENST00000540021 SPATA8Q6RVD6 105 aa7.39□□□□□ -1.23
MSH6-210ENST00000540021 KRTAP13-2Q52LG2 175 aa7.39□□□□□ -1.23
MSH6-210ENST00000540021 HUWE1Q7Z6Z7 4374 aaKnown RBP7.39□□□□□ -1.23
MSH6-210ENST00000540021 KRTAP10-1P60331 282 aa7.38□□□□□ -1.23
MSH6-210ENST00000540021 DNAH7Q8WXX0 4024 aa7.37□□□□□ -1.23
MSH6-210ENST00000540021 DNAH9Q9NYC9 4486 aa7.36□□□□□ -1.23
MSH6-210ENST00000540021 A0A1B0GU33 70 aa7.34□□□□□ -1.23
MSH6-210ENST00000540021 H3BS24 57 aa7.31□□□□□ -1.24
MSH6-210ENST00000540021 A0A0D9SG42 100 aa7.31□□□□□ -1.24
MSH6-210ENST00000540021 KRTAP13-3Q3SY46 172 aa7.29□□□□□ -1.24
MSH6-210ENST00000540021 SPINT4Q6UDR6 99 aa7.22□□□□□ -1.25
MSH6-210ENST00000540021 PLECQ15149 4684 aaKnown RBP7.19□□□□□ -1.26
MSH6-210ENST00000540021 KRTAP16-1A8MUX0 517 aa7.18□□□□□ -1.26
MSH6-210ENST00000540021 H1FX-AS1Q4G0G2 97 aa7.15□□□□□ -1.26
MSH6-210ENST00000540021 KRTAP1-4P0C5Y4 121 aa7.14□□□□□ -1.27
MSH6-210ENST00000540021 Q6ZSA8 131 aa7.14□□□□□ -1.27
MSH6-210ENST00000540021 STARD9Q9P2P6 4700 aa7.09□□□□□ -1.27
MSH6-210ENST00000540021 H0YAA0 97 aa7.09□□□□□ -1.27
MSH6-210ENST00000540021 KMT2AQ03164 3969 aa7.07□□□□□ -1.28
MSH6-210ENST00000540021 PRKDCP78527 4128 aaKnown RBP7.07□□□□□ -1.28
MSH6-210ENST00000540021 KRTAP25-1Q3LHN0 102 aa7.07□□□□□ -1.28
MSH6-210ENST00000540021 DYNC2H1Q8NCM8 4307 aaKnown RBP7.07□□□□□ -1.28
MSH6-210ENST00000540021 FRAS1Q86XX4 4008 aa7.06□□□□□ -1.28
MSH6-210ENST00000540021 HECTD4Q9Y4D8 3996 aa7.01□□□□□ -1.29
MSH6-210ENST00000540021 COX6B2Q6YFQ2 88 aa7.01□□□□□ -1.29
MSH6-210ENST00000540021 DNAH2Q9P225 4427 aa7□□□□□ -1.29
MSH6-210ENST00000540021 A8MUU9 505 aa7□□□□□ -1.29
MSH6-210ENST00000540021 RPL37P61927 97 aaKnown RBP6.99□□□□□ -1.29
MSH6-210ENST00000540021 ROMO1P60602 79 aa6.98□□□□□ -1.29
MSH6-210ENST00000540021 VPS13DQ5THJ4 4388 aa6.96□□□□□ -1.29
MSH6-210ENST00000540021 DNHD1Q96M86 4753 aa6.94□□□□□ -1.3
MSH6-210ENST00000540021 DNAH8Q96JB1 4490 aa6.94□□□□□ -1.3
MSH6-210ENST00000540021 S4R3F8 94 aa6.92□□□□□ -1.3
MSH6-210ENST00000540021 DNAH11Q96DT5 4516 aa6.91□□□□□ -1.3
MSH6-210ENST00000540021 C20orf166-AS1Q96NR2 134 aa6.91□□□□□ -1.3
MSH6-210ENST00000540021 DNAH17Q9UFH2 4485 aa6.91□□□□□ -1.3
MSH6-210ENST00000540021 DNAH6Q9C0G6 4158 aa6.9□□□□□ -1.3
MSH6-210ENST00000540021 RPS29P62273 56 aaKnown RBP6.87□□□□□ -1.31
MSH6-210ENST00000540021 C10orf95Q9H7T3 257 aa6.86□□□□□ -1.31
MSH6-210ENST00000540021 KRTAP3-1Q9BYR8 98 aa6.85□□□□□ -1.31
MSH6-210ENST00000540021 ALMS1Q8TCU4 4167 aa6.8□□□□□ -1.32
MSH6-210ENST00000540021 DNAH5Q8TE73 4624 aa6.77□□□□□ -1.33
MSH6-210ENST00000540021 HYDINQ4G0P3 5121 aa6.77□□□□□ -1.33
MSH6-210ENST00000540021 LRP1BQ9NZR2 4599 aa6.76□□□□□ -1.33
MSH6-210ENST00000540021 NDUFAF8A1L188 74 aa6.74□□□□□ -1.33
MSH6-210ENST00000540021 Q5VSD8 79 aa6.74□□□□□ -1.33
MSH6-210ENST00000540021 P0C880 135 aa6.72□□□□□ -1.33
MSH6-210ENST00000540021 FAT2Q9NYQ8 4349 aa6.68□□□□□ -1.34
MSH6-210ENST00000540021 PKD1P98161 4303 aa6.68□□□□□ -1.34
MSH6-210ENST00000540021 M0QZ58 72 aa6.66□□□□□ -1.34
MSH6-210ENST00000540021 R4GN34 69 aa6.65□□□□□ -1.34
MSH6-210ENST00000540021 KRTAP13-4Q3LI77 160 aa6.64□□□□□ -1.35
MSH6-210ENST00000540021 XP32Q5T750 250 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms