RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 MYCBP2O75592 4640 aa3.7□□□□□ -1.82
SNHG1-212ENST00000539975 TRBV7-7A0A0K0K1E9 115 aa3.69□□□□□ -1.82
SNHG1-212ENST00000539975 F8W1H4 67 aa3.69□□□□□ -1.82
SNHG1-212ENST00000539975 PDE6GP18545 87 aa3.69□□□□□ -1.82
SNHG1-212ENST00000539975 SEC61GP60059 68 aa3.69□□□□□ -1.82
SNHG1-212ENST00000539975 A0A0G2JQZ4 141 aa3.68□□□□□ -1.82
SNHG1-212ENST00000539975 H3BT86 120 aa3.68□□□□□ -1.82
SNHG1-212ENST00000539975 K7EP34 96 aa3.68□□□□□ -1.82
SNHG1-212ENST00000539975 CCKP06307 115 aa3.68□□□□□ -1.82
SNHG1-212ENST00000539975 Q5XG85 94 aa3.68□□□□□ -1.82
SNHG1-212ENST00000539975 Q6Q795 121 aa3.68□□□□□ -1.82
SNHG1-212ENST00000539975 TRBV7-4A0A0J9YYF1 115 aa3.67□□□□□ -1.82
SNHG1-212ENST00000539975 A0A087WSZ3 146 aa3.66□□□□□ -1.82
SNHG1-212ENST00000539975 LRP1Q07954 4544 aaKnown RBP3.66□□□□□ -1.82
SNHG1-212ENST00000539975 A0A1B0GW54 56 aa3.65□□□□□ -1.83
SNHG1-212ENST00000539975 RPS28P62857 69 aaKnown RBP3.65□□□□□ -1.83
SNHG1-212ENST00000539975 TPRXLQ17RH7 258 aa3.65□□□□□ -1.83
SNHG1-212ENST00000539975 ASB16-AS1Q495Z4 193 aa3.65□□□□□ -1.83
SNHG1-212ENST00000539975 C1orf195Q5TG92 126 aa3.64□□□□□ -1.83
SNHG1-212ENST00000539975 ANAPC13Q9BS18 74 aa3.64□□□□□ -1.83
SNHG1-212ENST00000539975 LOC110117498A0A087WWA1 95 aa3.63□□□□□ -1.83
SNHG1-212ENST00000539975 A0A1W2PNM2 257 aa3.63□□□□□ -1.83
SNHG1-212ENST00000539975 SMIM20Q8N5G0 67 aa3.63□□□□□ -1.83
SNHG1-212ENST00000539975 C14orf132Q9NPU4 83 aa3.63□□□□□ -1.83
SNHG1-212ENST00000539975 PKHD1L1Q86WI1 4243 aa3.62□□□□□ -1.83
SNHG1-212ENST00000539975 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
SNHG1-212ENST00000539975 FAT3Q8TDW7 4589 aa3.62□□□□□ -1.83
SNHG1-212ENST00000539975 IGKV4-1P06312 121 aa3.61□□□□□ -1.83
SNHG1-212ENST00000539975 NREPQ16612 68 aa3.61□□□□□ -1.83
SNHG1-212ENST00000539975 Q6ZQT0 140 aa3.61□□□□□ -1.83
SNHG1-212ENST00000539975 C9orf92A6NGG3 77 aa3.6□□□□□ -1.83
SNHG1-212ENST00000539975 J3KT08 172 aa3.6□□□□□ -1.83
SNHG1-212ENST00000539975 NDUFB1O75438 58 aa3.6□□□□□ -1.83
SNHG1-212ENST00000539975 OBSCN-AS1Q96MR7 158 aa3.6□□□□□ -1.83
SNHG1-212ENST00000539975 SEC61BP60468 96 aaKnown RBP3.59□□□□□ -1.83
SNHG1-212ENST00000539975 KRTAP13-3Q3SY46 172 aa3.59□□□□□ -1.83
SNHG1-212ENST00000539975 DEFB116Q30KQ4 102 aa3.57□□□□□ -1.84
SNHG1-212ENST00000539975 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
SNHG1-212ENST00000539975 UBL5Q9BZL1 73 aa3.57□□□□□ -1.84
SNHG1-212ENST00000539975 HERC1Q15751 4861 aa3.57□□□□□ -1.84
SNHG1-212ENST00000539975 TNXBP22105 4242 aa3.56□□□□□ -1.84
SNHG1-212ENST00000539975 MT3P25713 68 aa3.56□□□□□ -1.84
SNHG1-212ENST00000539975 LINC00313P59037 77 aa3.56□□□□□ -1.84
SNHG1-212ENST00000539975 ETDBQ3ZM63 59 aa3.56□□□□□ -1.84
SNHG1-212ENST00000539975 Q96NJ1 140 aa3.56□□□□□ -1.84
SNHG1-212ENST00000539975 IMUPQ9GZP8 106 aa3.56□□□□□ -1.84
SNHG1-212ENST00000539975 LINC00472Q9H8W2 130 aa3.56□□□□□ -1.84
SNHG1-212ENST00000539975 PRO0461Q9UI25 63 aa3.56□□□□□ -1.84
SNHG1-212ENST00000539975 IGHV6-1A0A0B4J1U7 121 aa3.55□□□□□ -1.84
SNHG1-212ENST00000539975 ATP11AUNQ6ZP68 121 aa3.55□□□□□ -1.84
SNHG1-212ENST00000539975 V9GYY9 64 aa3.55□□□□□ -1.84
SNHG1-212ENST00000539975 A0A0U1RQV1 116 aa3.54□□□□□ -1.84
SNHG1-212ENST00000539975 C8orf87E5RJ46 101 aa3.54□□□□□ -1.84
SNHG1-212ENST00000539975 BPY2O14599 106 aa3.54□□□□□ -1.84
SNHG1-212ENST00000539975 A0A1B0GVX0 72 aa3.53□□□□□ -1.84
SNHG1-212ENST00000539975 A8MWP4 228 aa3.53□□□□□ -1.84
SNHG1-212ENST00000539975 ACYP1P07311 99 aa3.53□□□□□ -1.84
SNHG1-212ENST00000539975 PRO0628Q9UI54 55 aa3.53□□□□□ -1.84
SNHG1-212ENST00000539975 UQCRQO14949 82 aa3.52□□□□□ -1.85
SNHG1-212ENST00000539975 DSCR10P59022 87 aa3.52□□□□□ -1.85
SNHG1-212ENST00000539975 MT-ATP8P03928 68 aa3.51□□□□□ -1.85
SNHG1-212ENST00000539975 RPL37P61927 97 aaKnown RBP3.51□□□□□ -1.85
SNHG1-212ENST00000539975 Q6ZVQ6 151 aa3.51□□□□□ -1.85
SNHG1-212ENST00000539975 Q75L30 129 aa3.5□□□□□ -1.85
SNHG1-212ENST00000539975 FAM240AA0A1B0GVK7 77 aa3.49□□□□□ -1.85
SNHG1-212ENST00000539975 CCDC179H3BU77 68 aa3.49□□□□□ -1.85
SNHG1-212ENST00000539975 TMEM258P61165 79 aa3.49□□□□□ -1.85
SNHG1-212ENST00000539975 PCOTHQ58A44 107 aa3.49□□□□□ -1.85
SNHG1-212ENST00000539975 PRR15Q8IV56 129 aa3.49□□□□□ -1.85
SNHG1-212ENST00000539975 LINC00846Q9NV44 126 aa3.49□□□□□ -1.85
SNHG1-212ENST00000539975 HMCN2Q8NDA2 5059 aa3.48□□□□□ -1.85
SNHG1-212ENST00000539975 IGKV3D-7A0A0C4DH55 119 aa3.48□□□□□ -1.85
SNHG1-212ENST00000539975 C8orf17Q9NRJ1 99 aa3.48□□□□□ -1.85
SNHG1-212ENST00000539975 NDUFS5O43920 106 aa3.47□□□□□ -1.85
SNHG1-212ENST00000539975 C20orf166-AS1Q96NR2 134 aa3.47□□□□□ -1.85
SNHG1-212ENST00000539975 hDV103S1A0JD37 113 aa3.46□□□□□ -1.86
SNHG1-212ENST00000539975 A8MUU9 505 aa3.46□□□□□ -1.86
SNHG1-212ENST00000539975 K7EQZ3 153 aa3.46□□□□□ -1.86
SNHG1-212ENST00000539975 CXCL6P80162 114 aa3.46□□□□□ -1.86
SNHG1-212ENST00000539975 ATP5EP2Q5VTU8 51 aa3.45□□□□□ -1.86
SNHG1-212ENST00000539975 CASC2Q6XLA1 102 aa3.45□□□□□ -1.86
SNHG1-212ENST00000539975 NOTCH2NLQ7Z3S9 236 aa3.45□□□□□ -1.86
SNHG1-212ENST00000539975 TMEM254Q8TBM7 123 aa3.45□□□□□ -1.86
SNHG1-212ENST00000539975 MRPL34Q9BQ48 92 aaKnown RBP3.45□□□□□ -1.86
SNHG1-212ENST00000539975 COX7CP15954 63 aa3.44□□□□□ -1.86
SNHG1-212ENST00000539975 ATOX1O00244 68 aa3.43□□□□□ -1.86
SNHG1-212ENST00000539975 HIST1H4AP62805 103 aaKnown RBP3.43□□□□□ -1.86
SNHG1-212ENST00000539975 WFDC13Q8IUB5 93 aa3.43□□□□□ -1.86
SNHG1-212ENST00000539975 Q8N9L7 120 aa3.43□□□□□ -1.86
SNHG1-212ENST00000539975 LPAP08519 4548 aa3.42□□□□□ -1.86
SNHG1-212ENST00000539975 MMP24-AS1A0A0U1RRL7 71 aa3.42□□□□□ -1.86
SNHG1-212ENST00000539975 KRTAP16-1A8MUX0 517 aa3.42□□□□□ -1.86
SNHG1-212ENST00000539975 HCG22E2RYF7 251 aa3.42□□□□□ -1.86
SNHG1-212ENST00000539975 C4orf26Q17RF5 130 aa3.42□□□□□ -1.86
SNHG1-212ENST00000539975 LINC00643Q86TS7 51 aa3.42□□□□□ -1.86
SNHG1-212ENST00000539975 LRP2P98164 4655 aa3.41□□□□□ -1.86
SNHG1-212ENST00000539975 KRTAP10-6P60371 365 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-212ENST00000539975 COX6B2Q6YFQ2 88 aa3.41□□□□□ -1.86
SNHG1-212ENST00000539975 ZCCHC13Q8WW36 166 aaKnown RBP3.41□□□□□ -1.86
SNHG1-212ENST00000539975 UBR4Q5T4S7 5183 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms