RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 PLA2G1BP04054 148 aaKnown RBP9.35□□□□□ -0.91
ATP2C1-224ENST00000533801 LINC00336Q6ZUF6 198 aa9.35□□□□□ -0.91
ATP2C1-224ENST00000533801 ZCCHC13Q8WW36 166 aaKnown RBP9.35□□□□□ -0.91
ATP2C1-224ENST00000533801 MRPL34Q9BQ48 92 aaKnown RBP9.33□□□□□ -0.92
ATP2C1-224ENST00000533801 C4orf48Q5BLP8 95 aa9.33□□□□□ -0.92
ATP2C1-224ENST00000533801 LCE6AA0A183 80 aa9.32□□□□□ -0.92
ATP2C1-224ENST00000533801 KRTAP13-2Q52LG2 175 aa9.31□□□□□ -0.92
ATP2C1-224ENST00000533801 PKHD1P08F94 4074 aa9.29□□□□□ -0.92
ATP2C1-224ENST00000533801 TYMSOSQ8TAI1 123 aa9.27□□□□□ -0.93
ATP2C1-224ENST00000533801 SSBP3-AS1Q7Z2R9 100 aa9.27□□□□□ -0.93
ATP2C1-224ENST00000533801 C1orf195Q5TG92 126 aa9.26□□□□□ -0.93
ATP2C1-224ENST00000533801 SPTSSBQ8NFR3 76 aa9.26□□□□□ -0.93
ATP2C1-224ENST00000533801 PRR26Q8N8Z3 221 aa9.25□□□□□ -0.93
ATP2C1-224ENST00000533801 LINC00313P59037 77 aa9.24□□□□□ -0.93
ATP2C1-224ENST00000533801 ALMS1Q8TCU4 4167 aa9.23□□□□□ -0.93
ATP2C1-224ENST00000533801 FLG2Q5D862 2391 aaPredicted RBP9.23□□□□□ -0.93
ATP2C1-224ENST00000533801 CD164Q04900 197 aa9.23□□□□□ -0.93
ATP2C1-224ENST00000533801 Q5W150 140 aa9.23□□□□□ -0.93
ATP2C1-224ENST00000533801 V9GYY9 64 aa9.23□□□□□ -0.93
ATP2C1-224ENST00000533801 VPS13BQ7Z7G8 4022 aa9.23□□□□□ -0.93
ATP2C1-224ENST00000533801 TP53AIP1Q9HCN2 124 aa9.23□□□□□ -0.93
ATP2C1-224ENST00000533801 PRO0628Q9UI54 55 aa9.23□□□□□ -0.93
ATP2C1-224ENST00000533801 Q6ZSA8 131 aa9.21□□□□□ -0.94
ATP2C1-224ENST00000533801 FAT1Q14517 4588 aa9.19□□□□□ -0.94
ATP2C1-224ENST00000533801 FAT2Q9NYQ8 4349 aa9.19□□□□□ -0.94
ATP2C1-224ENST00000533801 DMBT1Q9UGM3 2413 aaPredicted RBP9.19□□□□□ -0.94
ATP2C1-224ENST00000533801 IGKV2D-30A0A075B6S6 120 aa9.17□□□□□ -0.94
ATP2C1-224ENST00000533801 IGKV2-30P06310 120 aa9.17□□□□□ -0.94
ATP2C1-224ENST00000533801 Q8N9P0 234 aaPredicted RBP9.17□□□□□ -0.94
ATP2C1-224ENST00000533801 H3BPC8 53 aa9.17□□□□□ -0.94
ATP2C1-224ENST00000533801 A8MUN3 132 aa9.16□□□□□ -0.94
ATP2C1-224ENST00000533801 COA5Q86WW8 74 aa9.16□□□□□ -0.94
ATP2C1-224ENST00000533801 KRTAP1-4P0C5Y4 121 aa9.16□□□□□ -0.94
ATP2C1-224ENST00000533801 PKD1P98161 4303 aa9.14□□□□□ -0.95
ATP2C1-224ENST00000533801 SPAG11AQ6PDA7 123 aa9.14□□□□□ -0.95
ATP2C1-224ENST00000533801 SACSQ9NZJ4 4579 aa9.14□□□□□ -0.95
ATP2C1-224ENST00000533801 CYP4F30PQ9H0H9 118 aa9.13□□□□□ -0.95
ATP2C1-224ENST00000533801 PRR15LQ9BU68 103 aa9.12□□□□□ -0.95
ATP2C1-224ENST00000533801 C9orf92A6NGG3 77 aa9.12□□□□□ -0.95
ATP2C1-224ENST00000533801 LIMD2Q9BT23 127 aa9.11□□□□□ -0.95
ATP2C1-224ENST00000533801 ASB16-AS1Q495Z4 193 aa9.09□□□□□ -0.95
ATP2C1-224ENST00000533801 LINC00304Q8N9R0 145 aa9.09□□□□□ -0.95
ATP2C1-224ENST00000533801 DYNC1H1Q14204 4646 aaKnown RBP9.08□□□□□ -0.96
ATP2C1-224ENST00000533801 SPANXA2-OT1Q8N9U9 137 aa9.07□□□□□ -0.96
ATP2C1-224ENST00000533801 IGLV7-46A0A075B6I9 117 aa9.07□□□□□ -0.96
ATP2C1-224ENST00000533801 CHKB-CPT1BH3BT56 60 aa9.06□□□□□ -0.96
ATP2C1-224ENST00000533801 C8orf87E5RJ46 101 aa9.06□□□□□ -0.96
ATP2C1-224ENST00000533801 PMAIP1Q13794 54 aa9.06□□□□□ -0.96
ATP2C1-224ENST00000533801 SEC61GP60059 68 aa9.06□□□□□ -0.96
ATP2C1-224ENST00000533801 KMT2CQ8NEZ4 4911 aaKnown RBP9.04□□□□□ -0.96
ATP2C1-224ENST00000533801 LOC101927531A0A1B0GV80 90 aa9.04□□□□□ -0.96
ATP2C1-224ENST00000533801 HRES1P13985 223 aa9.01□□□□□ -0.97
ATP2C1-224ENST00000533801 FAM229AH3BQW9 127 aa9.01□□□□□ -0.97
ATP2C1-224ENST00000533801 KRTAP21-3Q3LHN1 58 aa9.01□□□□□ -0.97
ATP2C1-224ENST00000533801 A8MU10 97 aa8.99□□□□□ -0.97
ATP2C1-224ENST00000533801 SPINK1P00995 79 aa8.99□□□□□ -0.97
ATP2C1-224ENST00000533801 A6NED7 52 aa8.98□□□□□ -0.97
ATP2C1-224ENST00000533801 Q1T7F1 81 aa8.98□□□□□ -0.97
ATP2C1-224ENST00000533801 Q8N1X5 172 aa8.93□□□□□ -0.98
ATP2C1-224ENST00000533801 Q5VV11 94 aa8.91□□□□□ -0.98
ATP2C1-224ENST00000533801 C7orf65Q6ZTY9 151 aa8.91□□□□□ -0.98
ATP2C1-224ENST00000533801 ACYP2P14621 99 aa8.89□□□□□ -0.99
ATP2C1-224ENST00000533801 KRTAP13-3Q3SY46 172 aa8.88□□□□□ -0.99
ATP2C1-224ENST00000533801 KRTAP16-1A8MUX0 517 aa8.88□□□□□ -0.99
ATP2C1-224ENST00000533801 A0A1B0GVY2 172 aa8.87□□□□□ -0.99
ATP2C1-224ENST00000533801 APOBP04114 4563 aaKnown RBP8.86□□□□□ -0.99
ATP2C1-224ENST00000533801 RYR2Q92736 4967 aa8.84□□□□□ -0.99
ATP2C1-224ENST00000533801 LRP1Q07954 4544 aaKnown RBP8.83□□□□□ -1
ATP2C1-224ENST00000533801 Q5VSD8 79 aa8.78□□□□□ -1
ATP2C1-224ENST00000533801 MYCBP2O75592 4640 aa8.77□□□□□ -1.01
ATP2C1-224ENST00000533801 SPINK7P58062 85 aa8.77□□□□□ -1.01
ATP2C1-224ENST00000533801 DMAC1Q96GE9 116 aa8.75□□□□□ -1.01
ATP2C1-224ENST00000533801 A0A1B0GU69 56 aa8.72□□□□□ -1.01
ATP2C1-224ENST00000533801 LINC01558Q9Y6Z2 57 aa8.72□□□□□ -1.01
ATP2C1-224ENST00000533801 KRTAP10-4P60372 401 aaPredicted RBP8.71□□□□□ -1.01
ATP2C1-224ENST00000533801 KIAA1109Q2LD37 5005 aa8.71□□□□□ -1.02
ATP2C1-224ENST00000533801 LCA10Q71F78 164 aa8.7□□□□□ -1.02
ATP2C1-224ENST00000533801 RYR3Q15413 4870 aa8.69□□□□□ -1.02
ATP2C1-224ENST00000533801 Q75L30 129 aa8.68□□□□□ -1.02
ATP2C1-224ENST00000533801 RPS29P62273 56 aaKnown RBP8.59□□□□□ -1.03
ATP2C1-224ENST00000533801 FAT3Q8TDW7 4589 aa8.58□□□□□ -1.04
ATP2C1-224ENST00000533801 ATP11AUNQ6ZP68 121 aa8.57□□□□□ -1.04
ATP2C1-224ENST00000533801 PKHD1L1Q86WI1 4243 aa8.55□□□□□ -1.04
ATP2C1-224ENST00000533801 CDC42SE1Q9NRR8 79 aa8.55□□□□□ -1.04
ATP2C1-224ENST00000533801 HSPG2P98160 4391 aa8.54□□□□□ -1.04
ATP2C1-224ENST00000533801 A8MUU9 505 aa8.54□□□□□ -1.04
ATP2C1-224ENST00000533801 KRTAP17-1Q9BYP8 105 aa8.53□□□□□ -1.04
ATP2C1-224ENST00000533801 C20orf166-AS1Q96NR2 134 aa8.53□□□□□ -1.04
ATP2C1-224ENST00000533801 RYR1P21817 5038 aa8.5□□□□□ -1.05
ATP2C1-224ENST00000533801 RBM12B-AS1Q9P1G2 102 aa8.48□□□□□ -1.05
ATP2C1-224ENST00000533801 KTN1-AS1Q86SY8 53 aa8.46□□□□□ -1.05
ATP2C1-224ENST00000533801 EPPK1P58107 5090 aaKnown RBP8.46□□□□□ -1.06
ATP2C1-224ENST00000533801 PRAC1Q96KF2 57 aa8.45□□□□□ -1.06
ATP2C1-224ENST00000533801 MIR22HGQ0VDD5 57 aa8.45□□□□□ -1.06
ATP2C1-224ENST00000533801 KRTAP10-8P60410 259 aa8.44□□□□□ -1.06
ATP2C1-224ENST00000533801 UQCR11O14957 56 aa8.43□□□□□ -1.06
ATP2C1-224ENST00000533801 KRTAP3-1Q9BYR8 98 aa8.42□□□□□ -1.06
ATP2C1-224ENST00000533801 XP32Q5T750 250 aa8.36□□□□□ -1.07
ATP2C1-224ENST00000533801 TNXBP22105 4242 aa8.36□□□□□ -1.07
ATP2C1-224ENST00000533801 COX6B2Q6YFQ2 88 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms