RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 KRTAP29-1A8MX34 341 aaPredicted RBP6.55□□□□□ -1.36
AMBRA1-211ENST00000533727 DMBT1Q9UGM3 2413 aaPredicted RBP6.55□□□□□ -1.36
AMBRA1-211ENST00000533727 WDFY3Q8IZQ1 3526 aa6.54□□□□□ -1.36
AMBRA1-211ENST00000533727 SPATA8Q6RVD6 105 aa6.52□□□□□ -1.37
AMBRA1-211ENST00000533727 NBEAL2Q6ZNJ1 2754 aa6.52□□□□□ -1.37
AMBRA1-211ENST00000533727 KALRNO60229 2985 aa6.51□□□□□ -1.37
AMBRA1-211ENST00000533727 KRTAP16-1A8MUX0 517 aa6.5□□□□□ -1.37
AMBRA1-211ENST00000533727 NIPBLQ6KC79 2804 aaeCLIP6.5□□□□□ -1.37
AMBRA1-211ENST00000533727 H1FX-AS1Q4G0G2 97 aa6.5□□□□□ -1.37
AMBRA1-211ENST00000533727 KRTAP13-1Q8IUC0 172 aa6.49□□□□□ -1.37
AMBRA1-211ENST00000533727 CFAP47Q6ZTR5 3102 aa6.46□□□□□ -1.38
AMBRA1-211ENST00000533727 R4GN34 69 aa6.45□□□□□ -1.38
AMBRA1-211ENST00000533727 KRTAP11-1Q8IUC1 163 aa6.45□□□□□ -1.38
AMBRA1-211ENST00000533727 LOC400499M0QZD8 3231 aa6.44□□□□□ -1.38
AMBRA1-211ENST00000533727 KRTAP13-2Q52LG2 175 aa6.43□□□□□ -1.38
AMBRA1-211ENST00000533727 KRTAP7-1Q8IUC3 87 aa6.43□□□□□ -1.38
AMBRA1-211ENST00000533727 KRTAP25-1Q3LHN0 102 aa6.43□□□□□ -1.38
AMBRA1-211ENST00000533727 LRBAP50851 2863 aa6.42□□□□□ -1.38
AMBRA1-211ENST00000533727 A8MU10 97 aa6.4□□□□□ -1.38
AMBRA1-211ENST00000533727 ADM2Q7Z4H4 148 aa6.4□□□□□ -1.38
AMBRA1-211ENST00000533727 DCHS1Q96JQ0 3298 aa6.39□□□□□ -1.39
AMBRA1-211ENST00000533727 MUC3AQ02505 3323 aa6.36□□□□□ -1.39
AMBRA1-211ENST00000533727 ZANQ9Y493 2812 aa6.33□□□□□ -1.4
AMBRA1-211ENST00000533727 NDUFAF8A1L188 74 aa6.32□□□□□ -1.4
AMBRA1-211ENST00000533727 ZFHX4Q86UP3 3567 aa6.32□□□□□ -1.4
AMBRA1-211ENST00000533727 PLAC4Q8WY50 150 aa6.31□□□□□ -1.4
AMBRA1-211ENST00000533727 NOTCH2NLQ7Z3S9 236 aa6.31□□□□□ -1.4
AMBRA1-211ENST00000533727 ASPMQ8IZT6 3477 aa6.31□□□□□ -1.4
AMBRA1-211ENST00000533727 M0QZ58 72 aa6.29□□□□□ -1.4
AMBRA1-211ENST00000533727 ASH1LQ9NR48 2969 aaKnown RBP6.27□□□□□ -1.41
AMBRA1-211ENST00000533727 CRYBG3Q68DQ2 2970 aa6.27□□□□□ -1.41
AMBRA1-211ENST00000533727 A8MUU9 505 aa6.24□□□□□ -1.41
AMBRA1-211ENST00000533727 KRTAP1-4P0C5Y4 121 aa6.24□□□□□ -1.41
AMBRA1-211ENST00000533727 DMDP11532 3685 aa6.23□□□□□ -1.41
AMBRA1-211ENST00000533727 C20orf166-AS1Q96NR2 134 aa6.23□□□□□ -1.41
AMBRA1-211ENST00000533727 TPRXLQ17RH7 258 aa6.22□□□□□ -1.41
AMBRA1-211ENST00000533727 A0A1B0GVY2 172 aa6.22□□□□□ -1.41
AMBRA1-211ENST00000533727 CELSR2Q9HCU4 2923 aa6.21□□□□□ -1.41
AMBRA1-211ENST00000533727 HRNRQ86YZ3 2850 aaPredicted RBP6.21□□□□□ -1.42
AMBRA1-211ENST00000533727 NF1P21359 2839 aa6.19□□□□□ -1.42
AMBRA1-211ENST00000533727 SMG1Q96Q15 3661 aaKnown RBP6.18□□□□□ -1.42
AMBRA1-211ENST00000533727 CSMD1Q96PZ7 3565 aa6.17□□□□□ -1.42
AMBRA1-211ENST00000533727 MXRA5Q9NR99 2828 aa6.17□□□□□ -1.42
AMBRA1-211ENST00000533727 DCHS2Q6V1P9 2916 aa6.16□□□□□ -1.42
AMBRA1-211ENST00000533727 RELNP78509 3460 aa6.15□□□□□ -1.42
AMBRA1-211ENST00000533727 XP32Q5T750 250 aa6.14□□□□□ -1.43
AMBRA1-211ENST00000533727 LAMA5O15230 3695 aa6.14□□□□□ -1.43
AMBRA1-211ENST00000533727 FBN2P35556 2912 aa6.1□□□□□ -1.43
AMBRA1-211ENST00000533727 PDZD2O15018 2839 aa6.1□□□□□ -1.43
AMBRA1-211ENST00000533727 TENM2Q9NT68 2774 aa6.06□□□□□ -1.44
AMBRA1-211ENST00000533727 KRTAP10-8P60410 259 aa6.06□□□□□ -1.44
AMBRA1-211ENST00000533727 TENM3Q9P273 2699 aa6.04□□□□□ -1.44
AMBRA1-211ENST00000533727 SPENQ96T58 3664 aaKnown RBP6.03□□□□□ -1.44
AMBRA1-211ENST00000533727 TENM1Q9UKZ4 2725 aa6.03□□□□□ -1.44
AMBRA1-211ENST00000533727 KRTAP13-3Q3SY46 172 aa6.02□□□□□ -1.45
AMBRA1-211ENST00000533727 SVEP1Q4LDE5 3571 aa6.02□□□□□ -1.45
AMBRA1-211ENST00000533727 OTOGQ6ZRI0 2925 aa5.93□□□□□ -1.46
AMBRA1-211ENST00000533727 C10orf95Q9H7T3 257 aa5.93□□□□□ -1.46
AMBRA1-211ENST00000533727 H0YAA0 97 aa5.91□□□□□ -1.46
AMBRA1-211ENST00000533727 CELSR1Q9NYQ6 3014 aa5.91□□□□□ -1.46
AMBRA1-211ENST00000533727 TNP1P09430 55 aa5.89□□□□□ -1.47
AMBRA1-211ENST00000533727 CUBNO60494 3623 aa5.88□□□□□ -1.47
AMBRA1-211ENST00000533727 P0C880 135 aa5.88□□□□□ -1.47
AMBRA1-211ENST00000533727 PP632Q6XCG6 107 aa5.88□□□□□ -1.47
AMBRA1-211ENST00000533727 KRTAP10-10P60014 251 aa5.84□□□□□ -1.47
AMBRA1-211ENST00000533727 PRO2289Q9P1D8 64 aa5.8□□□□□ -1.48
AMBRA1-211ENST00000533727 PKD1L1Q8TDX9 2849 aa5.78□□□□□ -1.48
AMBRA1-211ENST00000533727 FBN1P35555 2871 aaKnown RBP5.77□□□□□ -1.49
AMBRA1-211ENST00000533727 ZFHX3Q15911 3703 aa5.76□□□□□ -1.49
AMBRA1-211ENST00000533727 NBPF19A0A087WUL8 3843 aa5.72□□□□□ -1.49
AMBRA1-211ENST00000533727 TGP01266 2768 aa5.72□□□□□ -1.49
AMBRA1-211ENST00000533727 VWFP04275 2813 aa5.71□□□□□ -1.5
AMBRA1-211ENST00000533727 CSMD2Q7Z408 3487 aa5.64□□□□□ -1.51
AMBRA1-211ENST00000533727 BSNQ9UPA5 3926 aa5.63□□□□□ -1.51
AMBRA1-211ENST00000533727 ANK3Q12955 4377 aaKnown RBP5.63□□□□□ -1.51
AMBRA1-211ENST00000533727 FBN3Q75N90 2809 aa5.6□□□□□ -1.51
AMBRA1-211ENST00000533727 MT1HL1P0DM35 61 aa5.59□□□□□ -1.51
AMBRA1-211ENST00000533727 VPS13CQ709C8 3753 aa5.51□□□□□ -1.53
AMBRA1-211ENST00000533727 KRTAP10-4P60372 401 aaPredicted RBP5.48□□□□□ -1.53
AMBRA1-211ENST00000533727 KRTAP12-2P59991 146 aa5.45□□□□□ -1.54
AMBRA1-211ENST00000533727 SRRM2Q9UQ35 2752 aaKnown RBP5.44□□□□□ -1.54
AMBRA1-211ENST00000533727 KRTAP4-5Q9BYR2 181 aa5.4□□□□□ -1.55
AMBRA1-211ENST00000533727 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
AMBRA1-211ENST00000533727 ALMS1Q8TCU4 4167 aa5.38□□□□□ -1.55
AMBRA1-211ENST00000533727 KRTAP13-4Q3LI77 160 aa5.36□□□□□ -1.55
AMBRA1-211ENST00000533727 TRRAPQ9Y4A5 3859 aa5.36□□□□□ -1.55
AMBRA1-211ENST00000533727 MEGF8Q7Z7M0 2845 aa5.35□□□□□ -1.55
AMBRA1-211ENST00000533727 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
AMBRA1-211ENST00000533727 HUWE1Q7Z6Z7 4374 aaKnown RBP5.24□□□□□ -1.57
AMBRA1-211ENST00000533727 KRTAP15-1Q3LI76 137 aa5.23□□□□□ -1.57
AMBRA1-211ENST00000533727 COL7A1Q02388 2944 aa5.22□□□□□ -1.57
AMBRA1-211ENST00000533727 KRTAP10-6P60371 365 aaPredicted RBP5.21□□□□□ -1.58
AMBRA1-211ENST00000533727 ZNF469Q96JG9 3925 aaPredicted RBP5.15□□□□□ -1.58
AMBRA1-211ENST00000533727 AKAP9Q99996 3911 aa5.15□□□□□ -1.59
AMBRA1-211ENST00000533727 INE1O15225 51 aa5.14□□□□□ -1.59
AMBRA1-211ENST00000533727 DNAH9Q9NYC9 4486 aa5.09□□□□□ -1.59
AMBRA1-211ENST00000533727 DNAH11Q96DT5 4516 aa5.05□□□□□ -1.6
AMBRA1-211ENST00000533727 DNAH1Q9P2D7 4330 aa5.05□□□□□ -1.6
AMBRA1-211ENST00000533727 CSMD3Q7Z407 3707 aa5.05□□□□□ -1.6
AMBRA1-211ENST00000533727 DNAH10Q8IVF4 4471 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms