RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 TRRAPQ9Y4A5 3859 aa4.59□□□□□ -1.68
PTPRK-219ENST00000531050 LINC00304Q8N9R0 145 aa4.58□□□□□ -1.68
PTPRK-219ENST00000531050 KRTAP11-1Q8IUC1 163 aa4.57□□□□□ -1.68
PTPRK-219ENST00000531050 DNAH1Q9P2D7 4330 aa4.57□□□□□ -1.68
PTPRK-219ENST00000531050 H3BNG1 76 aa4.56□□□□□ -1.68
PTPRK-219ENST00000531050 KRTAP10-11P60412 298 aa4.56□□□□□ -1.68
PTPRK-219ENST00000531050 ATRQ13535 2644 aa4.56□□□□□ -1.68
PTPRK-219ENST00000531050 DNAH10OSP0CZ25 163 aa4.55□□□□□ -1.68
PTPRK-219ENST00000531050 PKD1L1Q8TDX9 2849 aa4.54□□□□□ -1.68
PTPRK-219ENST00000531050 CDK2AP2O75956 126 aa4.53□□□□□ -1.68
PTPRK-219ENST00000531050 CHTF8P0CG12 524 aa4.52□□□□□ -1.69
PTPRK-219ENST00000531050 H0YAA0 97 aa4.51□□□□□ -1.69
PTPRK-219ENST00000531050 CRIPTQ9P021 101 aa4.51□□□□□ -1.69
PTPRK-219ENST00000531050 KRTAP24-1Q3LI83 254 aa4.5□□□□□ -1.69
PTPRK-219ENST00000531050 IGLV9-49A0A0B4J1Y8 123 aa4.5□□□□□ -1.69
PTPRK-219ENST00000531050 NDUFAF8A1L188 74 aa4.48□□□□□ -1.69
PTPRK-219ENST00000531050 IGKV2-30P06310 120 aa4.48□□□□□ -1.69
PTPRK-219ENST00000531050 FBN1P35555 2871 aaKnown RBP4.48□□□□□ -1.69
PTPRK-219ENST00000531050 TENM3Q9P273 2699 aa4.48□□□□□ -1.69
PTPRK-219ENST00000531050 Q6ZSA8 131 aa4.48□□□□□ -1.69
PTPRK-219ENST00000531050 KRTAP13-1Q8IUC0 172 aa4.47□□□□□ -1.69
PTPRK-219ENST00000531050 C20orf166-AS1Q96NR2 134 aa4.47□□□□□ -1.69
PTPRK-219ENST00000531050 CMYA5Q8N3K9 4069 aa4.47□□□□□ -1.69
PTPRK-219ENST00000531050 FLG2Q5D862 2391 aaPredicted RBP4.47□□□□□ -1.69
PTPRK-219ENST00000531050 KRTAP16-1A8MUX0 517 aa4.46□□□□□ -1.69
PTPRK-219ENST00000531050 LY6G6CO95867 125 aa4.46□□□□□ -1.69
PTPRK-219ENST00000531050 DNAH3Q8TD57 4116 aa4.46□□□□□ -1.7
PTPRK-219ENST00000531050 A0A087WTM6 91 aa4.46□□□□□ -1.7
PTPRK-219ENST00000531050 LCE2CQ5TA81 110 aa4.45□□□□□ -1.7
PTPRK-219ENST00000531050 COL6A5A8TX70 2615 aa4.44□□□□□ -1.7
PTPRK-219ENST00000531050 PANO1I0J062 215 aa4.44□□□□□ -1.7
PTPRK-219ENST00000531050 ANK2Q01484 3957 aa4.44□□□□□ -1.7
PTPRK-219ENST00000531050 FAM229AH3BQW9 127 aa4.43□□□□□ -1.7
PTPRK-219ENST00000531050 DNAH10Q8IVF4 4471 aa4.43□□□□□ -1.7
PTPRK-219ENST00000531050 NUPR2A6NF83 97 aa4.43□□□□□ -1.7
PTPRK-219ENST00000531050 SSBP3-AS1Q7Z2R9 100 aa4.43□□□□□ -1.7
PTPRK-219ENST00000531050 PSORS1C2Q9UIG4 136 aa4.43□□□□□ -1.7
PTPRK-219ENST00000531050 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
PTPRK-219ENST00000531050 SPINK6Q6UWN8 80 aa4.42□□□□□ -1.7
PTPRK-219ENST00000531050 STAB1Q9NY15 2570 aa4.42□□□□□ -1.7
PTPRK-219ENST00000531050 SPINT4Q6UDR6 99 aa4.42□□□□□ -1.7
PTPRK-219ENST00000531050 COL7A1Q02388 2944 aa4.42□□□□□ -1.7
PTPRK-219ENST00000531050 LYSTQ99698 3801 aa4.41□□□□□ -1.7
PTPRK-219ENST00000531050 IGKV2D-30A0A075B6S6 120 aa4.41□□□□□ -1.7
PTPRK-219ENST00000531050 WWC2-AS2Q96NR7 200 aa4.4□□□□□ -1.7
PTPRK-219ENST00000531050 SPINK1P00995 79 aa4.4□□□□□ -1.71
PTPRK-219ENST00000531050 NBEAL1Q6ZS30 2694 aa4.38□□□□□ -1.71
PTPRK-219ENST00000531050 TYMSOSQ8TAI1 123 aa4.37□□□□□ -1.71
PTPRK-219ENST00000531050 DNHD1Q96M86 4753 aa4.37□□□□□ -1.71
PTPRK-219ENST00000531050 A0A1B0GU33 70 aa4.37□□□□□ -1.71
PTPRK-219ENST00000531050 LCE2AQ5TA79 106 aaPredicted RBP4.37□□□□□ -1.71
PTPRK-219ENST00000531050 HUWE1Q7Z6Z7 4374 aaKnown RBP4.36□□□□□ -1.71
PTPRK-219ENST00000531050 TPRXLQ17RH7 258 aa4.36□□□□□ -1.71
PTPRK-219ENST00000531050 ANAPC11Q9NYG5 84 aa4.36□□□□□ -1.71
PTPRK-219ENST00000531050 NOTCH1P46531 2555 aa4.36□□□□□ -1.71
PTPRK-219ENST00000531050 C14orf177Q52M58 125 aa4.36□□□□□ -1.71
PTPRK-219ENST00000531050 MEGF8Q7Z7M0 2845 aa4.35□□□□□ -1.71
PTPRK-219ENST00000531050 H1FX-AS1Q4G0G2 97 aa4.35□□□□□ -1.71
PTPRK-219ENST00000531050 KRTAP1-5Q9BYS1 174 aa4.35□□□□□ -1.71
PTPRK-219ENST00000531050 KRTAP21-3Q3LHN1 58 aa4.34□□□□□ -1.71
PTPRK-219ENST00000531050 DNAH8Q96JB1 4490 aa4.34□□□□□ -1.72
PTPRK-219ENST00000531050 FRAS1Q86XX4 4008 aa4.32□□□□□ -1.72
PTPRK-219ENST00000531050 Q8N1X5 172 aa4.32□□□□□ -1.72
PTPRK-219ENST00000531050 K7ERS5 55 aa4.31□□□□□ -1.72
PTPRK-219ENST00000531050 UBE2DNLQ8IWF7 75 aa4.3□□□□□ -1.72
PTPRK-219ENST00000531050 APLNQ9ULZ1 77 aa4.3□□□□□ -1.72
PTPRK-219ENST00000531050 DNAH9Q9NYC9 4486 aa4.29□□□□□ -1.72
PTPRK-219ENST00000531050 MGAM2Q2M2H8 2515 aa4.29□□□□□ -1.72
PTPRK-219ENST00000531050 LUZP6Q538Z0 58 aa4.27□□□□□ -1.73
PTPRK-219ENST00000531050 C10orf95Q9H7T3 257 aa4.27□□□□□ -1.73
PTPRK-219ENST00000531050 CIRBP-AS1Q8TBR5 109 aa4.27□□□□□ -1.73
PTPRK-219ENST00000531050 DYNC2H1Q8NCM8 4307 aaKnown RBP4.26□□□□□ -1.73
PTPRK-219ENST00000531050 STAB2Q8WWQ8 2551 aa4.26□□□□□ -1.73
PTPRK-219ENST00000531050 NBDYA0A0U1RRE5 68 aa4.25□□□□□ -1.73
PTPRK-219ENST00000531050 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.25□□□□□ -1.73
PTPRK-219ENST00000531050 DNAH17Q9UFH2 4485 aa4.25□□□□□ -1.73
PTPRK-219ENST00000531050 LORP23490 312 aaPredicted RBP4.23□□□□□ -1.73
PTPRK-219ENST00000531050 COX6B2Q6YFQ2 88 aa4.23□□□□□ -1.73
PTPRK-219ENST00000531050 Q6ZRN7 208 aaPredicted RBP4.23□□□□□ -1.73
PTPRK-219ENST00000531050 SPACA4Q8TDM5 124 aa4.22□□□□□ -1.73
PTPRK-219ENST00000531050 TGP01266 2768 aa4.22□□□□□ -1.73
PTPRK-219ENST00000531050 DNAH7Q8WXX0 4024 aa4.21□□□□□ -1.74
PTPRK-219ENST00000531050 RPL37P61927 97 aaKnown RBP4.19□□□□□ -1.74
PTPRK-219ENST00000531050 FBN3Q75N90 2809 aa4.18□□□□□ -1.74
PTPRK-219ENST00000531050 KRTAP3-1Q9BYR8 98 aa4.18□□□□□ -1.74
PTPRK-219ENST00000531050 PLECQ15149 4684 aaKnown RBP4.18□□□□□ -1.74
PTPRK-219ENST00000531050 PRKDCP78527 4128 aaKnown RBP4.18□□□□□ -1.74
PTPRK-219ENST00000531050 VPS13DQ5THJ4 4388 aa4.15□□□□□ -1.75
PTPRK-219ENST00000531050 STARD9Q9P2P6 4700 aa4.13□□□□□ -1.75
PTPRK-219ENST00000531050 KRTAP13-4Q3LI77 160 aa4.13□□□□□ -1.75
PTPRK-219ENST00000531050 HECTD4Q9Y4D8 3996 aa4.12□□□□□ -1.75
PTPRK-219ENST00000531050 A0A0D9SG42 100 aa4.11□□□□□ -1.75
PTPRK-219ENST00000531050 KRTAP13-2Q52LG2 175 aa4.1□□□□□ -1.75
PTPRK-219ENST00000531050 KRTAP10-6P60371 365 aaPredicted RBP4.09□□□□□ -1.76
PTPRK-219ENST00000531050 DMBT1Q9UGM3 2413 aaPredicted RBP4.07□□□□□ -1.76
PTPRK-219ENST00000531050 KMT2AQ03164 3969 aa4.07□□□□□ -1.76
PTPRK-219ENST00000531050 DNAH2Q9P225 4427 aa4.07□□□□□ -1.76
PTPRK-219ENST00000531050 SEC61BP60468 96 aaKnown RBP4.06□□□□□ -1.76
PTPRK-219ENST00000531050 S4R3F8 94 aa4.05□□□□□ -1.76
PTPRK-219ENST00000531050 XP32Q5T750 250 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms