RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 CSAG1Q6PB30 78 aa5.01□□□□□ -1.61
PCM1-212ENST00000519253 A0A1B0GU33 70 aa5.01□□□□□ -1.61
PCM1-212ENST00000519253 SMG1Q96Q15 3661 aaKnown RBP4.99□□□□□ -1.61
PCM1-212ENST00000519253 HIVEP1P15822 2718 aa4.98□□□□□ -1.61
PCM1-212ENST00000519253 SPINT4Q6UDR6 99 aa4.97□□□□□ -1.61
PCM1-212ENST00000519253 H3BS24 57 aa4.97□□□□□ -1.61
PCM1-212ENST00000519253 Q6ZRN7 208 aaPredicted RBP4.95□□□□□ -1.62
PCM1-212ENST00000519253 CELSR1Q9NYQ6 3014 aa4.94□□□□□ -1.62
PCM1-212ENST00000519253 CSMD1Q96PZ7 3565 aa4.94□□□□□ -1.62
PCM1-212ENST00000519253 STAB2Q8WWQ8 2551 aa4.94□□□□□ -1.62
PCM1-212ENST00000519253 C9orf92A6NGG3 77 aa4.93□□□□□ -1.62
PCM1-212ENST00000519253 CRIPTQ9P021 101 aa4.92□□□□□ -1.62
PCM1-212ENST00000519253 CUBNO60494 3623 aa4.92□□□□□ -1.62
PCM1-212ENST00000519253 KMT2BQ9UMN6 2715 aaPredicted RBP4.91□□□□□ -1.62
PCM1-212ENST00000519253 ADM2Q7Z4H4 148 aa4.91□□□□□ -1.62
PCM1-212ENST00000519253 H1FX-AS1Q4G0G2 97 aa4.86□□□□□ -1.63
PCM1-212ENST00000519253 SVEP1Q4LDE5 3571 aa4.85□□□□□ -1.63
PCM1-212ENST00000519253 TENM3Q9P273 2699 aa4.85□□□□□ -1.63
PCM1-212ENST00000519253 A0A0D9SG42 100 aa4.84□□□□□ -1.63
PCM1-212ENST00000519253 KRTAP25-1Q3LHN0 102 aa4.82□□□□□ -1.64
PCM1-212ENST00000519253 RPL37P61927 97 aaKnown RBP4.81□□□□□ -1.64
PCM1-212ENST00000519253 ROMO1P60602 79 aa4.8□□□□□ -1.64
PCM1-212ENST00000519253 KRTAP13-2Q52LG2 175 aa4.8□□□□□ -1.64
PCM1-212ENST00000519253 SMR3BP02814 79 aaPredicted RBP4.8□□□□□ -1.64
PCM1-212ENST00000519253 KRTAP10-2P60368 255 aa4.79□□□□□ -1.64
PCM1-212ENST00000519253 SPENQ96T58 3664 aaKnown RBP4.79□□□□□ -1.64
PCM1-212ENST00000519253 KRTAP10-1P60331 282 aa4.79□□□□□ -1.64
PCM1-212ENST00000519253 KRTAP13-3Q3SY46 172 aa4.79□□□□□ -1.64
PCM1-212ENST00000519253 VWFP04275 2813 aa4.78□□□□□ -1.64
PCM1-212ENST00000519253 RPS29P62273 56 aaKnown RBP4.78□□□□□ -1.64
PCM1-212ENST00000519253 COX6B2Q6YFQ2 88 aa4.77□□□□□ -1.65
PCM1-212ENST00000519253 TENM1Q9UKZ4 2725 aa4.77□□□□□ -1.65
PCM1-212ENST00000519253 DMBT1Q9UGM3 2413 aaPredicted RBP4.76□□□□□ -1.65
PCM1-212ENST00000519253 PDZD2O15018 2839 aa4.72□□□□□ -1.65
PCM1-212ENST00000519253 Q6ZSA8 131 aa4.72□□□□□ -1.65
PCM1-212ENST00000519253 KRTAP16-1A8MUX0 517 aa4.71□□□□□ -1.66
PCM1-212ENST00000519253 S4R3F8 94 aa4.71□□□□□ -1.66
PCM1-212ENST00000519253 A8MUU9 505 aa4.7□□□□□ -1.66
PCM1-212ENST00000519253 FLG2Q5D862 2391 aaPredicted RBP4.69□□□□□ -1.66
PCM1-212ENST00000519253 BSNQ9UPA5 3926 aa4.68□□□□□ -1.66
PCM1-212ENST00000519253 H0YAA0 97 aa4.66□□□□□ -1.66
PCM1-212ENST00000519253 TENM4Q6N022 2769 aa4.66□□□□□ -1.66
PCM1-212ENST00000519253 C20orf166-AS1Q96NR2 134 aa4.65□□□□□ -1.66
PCM1-212ENST00000519253 KRTAP1-4P0C5Y4 121 aa4.65□□□□□ -1.67
PCM1-212ENST00000519253 FBN1P35555 2871 aaKnown RBP4.64□□□□□ -1.67
PCM1-212ENST00000519253 PKD1L1Q8TDX9 2849 aa4.62□□□□□ -1.67
PCM1-212ENST00000519253 TGP01266 2768 aa4.61□□□□□ -1.67
PCM1-212ENST00000519253 LUZP6Q538Z0 58 aa4.6□□□□□ -1.67
PCM1-212ENST00000519253 OTOGQ6ZRI0 2925 aa4.59□□□□□ -1.67
PCM1-212ENST00000519253 ANK3Q12955 4377 aaKnown RBP4.55□□□□□ -1.68
PCM1-212ENST00000519253 SRRM2Q9UQ35 2752 aaKnown RBP4.55□□□□□ -1.68
PCM1-212ENST00000519253 CSMD2Q7Z408 3487 aa4.54□□□□□ -1.68
PCM1-212ENST00000519253 R4GN34 69 aa4.54□□□□□ -1.68
PCM1-212ENST00000519253 TENM2Q9NT68 2774 aa4.53□□□□□ -1.68
PCM1-212ENST00000519253 M0QZ58 72 aa4.53□□□□□ -1.68
PCM1-212ENST00000519253 NDUFAF8A1L188 74 aa4.52□□□□□ -1.69
PCM1-212ENST00000519253 CAMK2N1Q7Z7J9 78 aa4.5□□□□□ -1.69
PCM1-212ENST00000519253 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
PCM1-212ENST00000519253 Q5VSD8 79 aa4.45□□□□□ -1.7
PCM1-212ENST00000519253 C10orf95Q9H7T3 257 aa4.43□□□□□ -1.7
PCM1-212ENST00000519253 TRRAPQ9Y4A5 3859 aa4.41□□□□□ -1.7
PCM1-212ENST00000519253 KRTAP3-1Q9BYR8 98 aa4.41□□□□□ -1.7
PCM1-212ENST00000519253 VPS13CQ709C8 3753 aa4.41□□□□□ -1.7
PCM1-212ENST00000519253 SEC61BP60468 96 aaKnown RBP4.39□□□□□ -1.71
PCM1-212ENST00000519253 NBPF19A0A087WUL8 3843 aa4.39□□□□□ -1.71
PCM1-212ENST00000519253 ZFHX3Q15911 3703 aa4.39□□□□□ -1.71
PCM1-212ENST00000519253 J3QL48 77 aa4.39□□□□□ -1.71
PCM1-212ENST00000519253 FBN3Q75N90 2809 aa4.37□□□□□ -1.71
PCM1-212ENST00000519253 P0C880 135 aa4.37□□□□□ -1.71
PCM1-212ENST00000519253 XP32Q5T750 250 aa4.36□□□□□ -1.71
PCM1-212ENST00000519253 MEGF8Q7Z7M0 2845 aa4.35□□□□□ -1.71
PCM1-212ENST00000519253 TPRXLQ17RH7 258 aa4.32□□□□□ -1.72
PCM1-212ENST00000519253 AKAP9Q99996 3911 aa4.3□□□□□ -1.72
PCM1-212ENST00000519253 PLAC4Q8WY50 150 aa4.3□□□□□ -1.72
PCM1-212ENST00000519253 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
PCM1-212ENST00000519253 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
PCM1-212ENST00000519253 COL7A1Q02388 2944 aa4.27□□□□□ -1.73
PCM1-212ENST00000519253 KRTAP12-2P59991 146 aa4.27□□□□□ -1.73
PCM1-212ENST00000519253 KRTAP13-4Q3LI77 160 aa4.25□□□□□ -1.73
PCM1-212ENST00000519253 KRTAP12-1P59990 96 aa4.24□□□□□ -1.73
PCM1-212ENST00000519253 ZNF469Q96JG9 3925 aaPredicted RBP4.24□□□□□ -1.73
PCM1-212ENST00000519253 HUWE1Q7Z6Z7 4374 aaKnown RBP4.24□□□□□ -1.73
PCM1-212ENST00000519253 KRTAP10-8P60410 259 aa4.23□□□□□ -1.73
PCM1-212ENST00000519253 KRTAP3-2Q9BYR7 98 aa4.19□□□□□ -1.74
PCM1-212ENST00000519253 TNP1P09430 55 aa4.19□□□□□ -1.74
PCM1-212ENST00000519253 A0A1B0GVY2 172 aa4.19□□□□□ -1.74
PCM1-212ENST00000519253 KRTAP21-3Q3LHN1 58 aa4.19□□□□□ -1.74
PCM1-212ENST00000519253 KRTAP15-1Q3LI76 137 aa4.17□□□□□ -1.74
PCM1-212ENST00000519253 KRTAP3-3Q9BYR6 98 aa4.17□□□□□ -1.74
PCM1-212ENST00000519253 M0R2T5 61 aa4.11□□□□□ -1.75
PCM1-212ENST00000519253 DNAH9Q9NYC9 4486 aa4.07□□□□□ -1.76
PCM1-212ENST00000519253 DNAH10Q8IVF4 4471 aa4.07□□□□□ -1.76
PCM1-212ENST00000519253 KRTAP10-4P60372 401 aaPredicted RBP4.06□□□□□ -1.76
PCM1-212ENST00000519253 PLECQ15149 4684 aaKnown RBP4.06□□□□□ -1.76
PCM1-212ENST00000519253 CSMD3Q7Z407 3707 aa4.06□□□□□ -1.76
PCM1-212ENST00000519253 DNAH1Q9P2D7 4330 aa4.05□□□□□ -1.76
PCM1-212ENST00000519253 DNAH17Q9UFH2 4485 aa4.04□□□□□ -1.76
PCM1-212ENST00000519253 ALMS1Q8TCU4 4167 aa4.02□□□□□ -1.77
PCM1-212ENST00000519253 VPS13DQ5THJ4 4388 aa4.01□□□□□ -1.77
PCM1-212ENST00000519253 DNAH8Q96JB1 4490 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms