RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 KIF1AQ12756 1690 aa-0.17□□□□□ -2.44
SQLE-202ENST00000518604 DSTQ03001 7570 aaKnown RBP-0.17□□□□□ -2.44
SQLE-202ENST00000518604 SPRR2EP22531 72 aa-0.17□□□□□ -2.44
SQLE-202ENST00000518604 RPS27P42677 84 aaKnown RBP-0.17□□□□□ -2.44
SQLE-202ENST00000518604 PRLHP81277 87 aa-0.17□□□□□ -2.44
SQLE-202ENST00000518604 RPS27LQ71UM5 84 aaKnown RBP-0.17□□□□□ -2.44
SQLE-202ENST00000518604 KALRNO60229 2985 aa-0.17□□□□□ -2.44
SQLE-202ENST00000518604 ANKRD36CQ5JPF3 1778 aa-0.17□□□□□ -2.44
SQLE-202ENST00000518604 TEP1Q99973 2627 aaKnown RBP-0.17□□□□□ -2.44
SQLE-202ENST00000518604 ANKRD11Q6UB99 2663 aaPredicted RBP-0.18□□□□□ -2.44
SQLE-202ENST00000518604 LINC01549A6NIU2 74 aa-0.18□□□□□ -2.44
SQLE-202ENST00000518604 H0YGG7 62 aa-0.18□□□□□ -2.44
SQLE-202ENST00000518604 KRTAP6-1Q3LI64 71 aa-0.18□□□□□ -2.44
SQLE-202ENST00000518604 GNG13Q9P2W3 67 aa-0.18□□□□□ -2.44
SQLE-202ENST00000518604 S4R3F8 94 aa-0.18□□□□□ -2.44
SQLE-202ENST00000518604 STARD9Q9P2P6 4700 aa-0.18□□□□□ -2.44
SQLE-202ENST00000518604 A0A087WWC5 75 aa-0.19□□□□□ -2.44
SQLE-202ENST00000518604 NCBP2-AS2Q69YL0 99 aa-0.19□□□□□ -2.44
SQLE-202ENST00000518604 LRRK2Q5S007 2527 aa-0.19□□□□□ -2.44
SQLE-202ENST00000518604 PCLOQ9Y6V0 5065 aa-0.19□□□□□ -2.44
SQLE-202ENST00000518604 HERC1Q15751 4861 aa-0.19□□□□□ -2.44
SQLE-202ENST00000518604 MXRA5Q9NR99 2828 aa-0.19□□□□□ -2.44
SQLE-202ENST00000518604 FAT1Q14517 4588 aa-0.2□□□□□ -2.44
SQLE-202ENST00000518604 NBEAL2Q6ZNJ1 2754 aa-0.2□□□□□ -2.44
SQLE-202ENST00000518604 RANBP2P49792 3224 aaKnown RBP-0.2□□□□□ -2.44
SQLE-202ENST00000518604 CROCC2H7BZ55 1655 aa-0.2□□□□□ -2.44
SQLE-202ENST00000518604 DEFB106AQ8N104 65 aa-0.2□□□□□ -2.44
SQLE-202ENST00000518604 CLASP1Q7Z460 1538 aa-0.2□□□□□ -2.44
SQLE-202ENST00000518604 MTORP42345 2549 aa-0.2□□□□□ -2.44
SQLE-202ENST00000518604 TIAM1Q13009 1591 aa-0.2□□□□□ -2.44
SQLE-202ENST00000518604 FAM186AA6NE01 2351 aa-0.2□□□□□ -2.44
SQLE-202ENST00000518604 TOGARAM1Q9Y4F4 1720 aa-0.21□□□□□ -2.44
SQLE-202ENST00000518604 HIVEP1P15822 2718 aa-0.21□□□□□ -2.44
SQLE-202ENST00000518604 UTP20O75691 2785 aaKnown RBP-0.21□□□□□ -2.44
SQLE-202ENST00000518604 MYO18BQ8IUG5 2567 aa-0.21□□□□□ -2.44
SQLE-202ENST00000518604 ALS2Q96Q42 1657 aa-0.21□□□□□ -2.44
SQLE-202ENST00000518604 SPENQ96T58 3664 aaKnown RBP-0.22□□□□□ -2.44
SQLE-202ENST00000518604 DNAH1Q9P2D7 4330 aa-0.22□□□□□ -2.44
SQLE-202ENST00000518604 ERICH3Q5RHP9 1530 aa-0.22□□□□□ -2.44
SQLE-202ENST00000518604 SMIM31A0A1B0GVY4 71 aa-0.22□□□□□ -2.44
SQLE-202ENST00000518604 MT1AP04731 61 aa-0.22□□□□□ -2.44
SQLE-202ENST00000518604 WT1-ASQ06250 92 aa-0.22□□□□□ -2.44
SQLE-202ENST00000518604 KRTAP19-7Q3SYF9 63 aa-0.22□□□□□ -2.44
SQLE-202ENST00000518604 CDC42BPAQ5VT25 1732 aa-0.22□□□□□ -2.44
SQLE-202ENST00000518604 MUC17Q685J3 4493 aa-0.23□□□□□ -2.45
SQLE-202ENST00000518604 MINOS1Q5TGZ0 78 aa-0.23□□□□□ -2.45
SQLE-202ENST00000518604 SPRR2FQ96RM1 72 aa-0.23□□□□□ -2.45
SQLE-202ENST00000518604 NBEAQ8NFP9 2946 aa-0.23□□□□□ -2.45
SQLE-202ENST00000518604 DNAH8Q96JB1 4490 aa-0.23□□□□□ -2.45
SQLE-202ENST00000518604 ABCA10Q8WWZ4 1543 aa-0.23□□□□□ -2.45
SQLE-202ENST00000518604 UBR4Q5T4S7 5183 aa-0.24□□□□□ -2.45
SQLE-202ENST00000518604 SPTBN5Q9NRC6 3674 aaKnown RBP-0.24□□□□□ -2.45
SQLE-202ENST00000518604 WDR87Q6ZQQ6 2873 aa-0.24□□□□□ -2.45
SQLE-202ENST00000518604 C9orf92A6NGG3 77 aa-0.24□□□□□ -2.45
SQLE-202ENST00000518604 H3BNG1 76 aa-0.24□□□□□ -2.45
SQLE-202ENST00000518604 K7EMI3 77 aa-0.24□□□□□ -2.45
SQLE-202ENST00000518604 RIF1Q5UIP0 2472 aaKnown RBP-0.24□□□□□ -2.45
SQLE-202ENST00000518604 ACACAQ13085 2346 aa-0.25□□□□□ -2.45
SQLE-202ENST00000518604 M0R1W7 72 aa-0.25□□□□□ -2.45
SQLE-202ENST00000518604 C6orf48Q9UBA6 75 aa-0.25□□□□□ -2.45
SQLE-202ENST00000518604 UGGT1Q9NYU2 1555 aa-0.25□□□□□ -2.45
SQLE-202ENST00000518604 MAST1Q9Y2H9 1570 aa-0.25□□□□□ -2.45
SQLE-202ENST00000518604 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.25□□□□□ -2.45
SQLE-202ENST00000518604 IGIPA6NJ69 53 aa-0.26□□□□□ -2.45
SQLE-202ENST00000518604 SFTA3P0C7M3 94 aa-0.26□□□□□ -2.45
SQLE-202ENST00000518604 ACACBO00763 2458 aa-0.26□□□□□ -2.45
SQLE-202ENST00000518604 DNAH7Q8WXX0 4024 aa-0.26□□□□□ -2.45
SQLE-202ENST00000518604 LAMA1P25391 3075 aa-0.27□□□□□ -2.45
SQLE-202ENST00000518604 NEBP20929 6669 aa-0.27□□□□□ -2.45
SQLE-202ENST00000518604 HYDINQ4G0P3 5121 aa-0.27□□□□□ -2.45
SQLE-202ENST00000518604 ITPR3Q14573 2671 aa-0.27□□□□□ -2.45
SQLE-202ENST00000518604 PRXQ9BXM0 1461 aa-0.27□□□□□ -2.45
SQLE-202ENST00000518604 TRIOO75962 3097 aa-0.27□□□□□ -2.45
SQLE-202ENST00000518604 RYR3Q15413 4870 aa-0.27□□□□□ -2.45
SQLE-202ENST00000518604 HERC2O95714 4834 aa-0.28□□□□□ -2.45
SQLE-202ENST00000518604 USH2AO75445 5202 aa-0.28□□□□□ -2.45
SQLE-202ENST00000518604 CCDC168Q8NDH2 2452 aa-0.28□□□□□ -2.45
SQLE-202ENST00000518604 MGAM2Q2M2H8 2515 aa-0.28□□□□□ -2.45
SQLE-202ENST00000518604 COL12A1Q99715 3063 aa-0.29□□□□□ -2.46
SQLE-202ENST00000518604 RELNP78509 3460 aa-0.29□□□□□ -2.46
SQLE-202ENST00000518604 EEA1Q15075 1411 aa-0.29□□□□□ -2.46
SQLE-202ENST00000518604 MROH2AA6NES4 1674 aa-0.29□□□□□ -2.46
SQLE-202ENST00000518604 FCER1GP30273 86 aa-0.29□□□□□ -2.46
SQLE-202ENST00000518604 S100ZQ8WXG8 99 aa-0.29□□□□□ -2.46
SQLE-202ENST00000518604 CPS1P31327 1500 aa-0.29□□□□□ -2.46
SQLE-202ENST00000518604 A0A0C4DFX4 3053 aa-0.29□□□□□ -2.46
SQLE-202ENST00000518604 KIAA1109Q2LD37 5005 aa-0.3□□□□□ -2.46
SQLE-202ENST00000518604 IGLV5-48A0A075B6I7 105 aa-0.3□□□□□ -2.46
SQLE-202ENST00000518604 AGLP35573 1532 aa-0.3□□□□□ -2.46
SQLE-202ENST00000518604 PLECQ15149 4684 aaKnown RBP-0.31□□□□□ -2.46
SQLE-202ENST00000518604 PREX2Q70Z35 1606 aa-0.31□□□□□ -2.46
SQLE-202ENST00000518604 TLN2Q9Y4G6 2542 aa-0.31□□□□□ -2.46
SQLE-202ENST00000518604 RYR1P21817 5038 aa-0.31□□□□□ -2.46
SQLE-202ENST00000518604 KRTAP19-8Q3LI54 63 aa-0.31□□□□□ -2.46
SQLE-202ENST00000518604 USP9XQ93008 2570 aaPredicted RBP-0.32□□□□□ -2.46
SQLE-202ENST00000518604 CMYA5Q8N3K9 4069 aa-0.32□□□□□ -2.46
SQLE-202ENST00000518604 USP9YO00507 2555 aaPredicted RBP-0.33□□□□□ -2.46
SQLE-202ENST00000518604 NRXN3Q9Y4C0 1643 aa-0.33□□□□□ -2.46
SQLE-202ENST00000518604 KRTAP19-5Q3LI72 72 aa-0.33□□□□□ -2.46
SQLE-202ENST00000518604 SYCP2Q9BX26 1530 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms