RNA–Protein interactions for RNA: ENST00000516965.1

SNORA48.10-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 160 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.10-201ENST00000516965 VPS13BQ7Z7G8 4022 aa0.33□□□□□ -2.36
SNORA48.10-201ENST00000516965 LRRK2Q5S007 2527 aa0.33□□□□□ -2.36
SNORA48.10-201ENST00000516965 HSPG2P98160 4391 aa0.33□□□□□ -2.36
SNORA48.10-201ENST00000516965 SPTBN4Q9H254 2564 aa0.32□□□□□ -2.36
SNORA48.10-201ENST00000516965 ABCA5Q8WWZ7 1642 aa0.32□□□□□ -2.36
SNORA48.10-201ENST00000516965 TENM2Q9NT68 2774 aa0.32□□□□□ -2.36
SNORA48.10-201ENST00000516965 MAP1AP78559 2803 aaPredicted RBP0.32□□□□□ -2.36
SNORA48.10-201ENST00000516965 LMO7Q8WWI1 1683 aa0.32□□□□□ -2.36
SNORA48.10-201ENST00000516965 SETD2Q9BYW2 2564 aaPredicted RBP0.32□□□□□ -2.36
SNORA48.10-201ENST00000516965 DMXL1Q9Y485 3027 aa0.32□□□□□ -2.36
SNORA48.10-201ENST00000516965 A0A1B0GUL6 1792 aa0.32□□□□□ -2.36
SNORA48.10-201ENST00000516965 PDZD2O15018 2839 aa0.32□□□□□ -2.36
SNORA48.10-201ENST00000516965 COL7A1Q02388 2944 aa0.31□□□□□ -2.36
SNORA48.10-201ENST00000516965 H3BNG1 76 aa0.31□□□□□ -2.36
SNORA48.10-201ENST00000516965 PKD1P98161 4303 aa0.31□□□□□ -2.36
SNORA48.10-201ENST00000516965 SPG11Q96JI7 2443 aa0.3□□□□□ -2.36
SNORA48.10-201ENST00000516965 MTORP42345 2549 aa0.3□□□□□ -2.36
SNORA48.10-201ENST00000516965 DNAH9Q9NYC9 4486 aa0.3□□□□□ -2.36
SNORA48.10-201ENST00000516965 LINC01546A6NGU7 62 aa0.3□□□□□ -2.36
SNORA48.10-201ENST00000516965 NOP10Q9NPE3 64 aaKnown RBP0.3□□□□□ -2.36
SNORA48.10-201ENST00000516965 MUC5BQ9HC84 5762 aaPredicted RBP0.3□□□□□ -2.36
SNORA48.10-201ENST00000516965 FASNP49327 2511 aaKnown RBP0.29□□□□□ -2.36
SNORA48.10-201ENST00000516965 ANKRD11Q6UB99 2663 aaPredicted RBP0.29□□□□□ -2.36
SNORA48.10-201ENST00000516965 IGLV5-48A0A075B6I7 105 aa0.29□□□□□ -2.36
SNORA48.10-201ENST00000516965 SMIM2Q9BVW6 85 aa0.29□□□□□ -2.36
SNORA48.10-201ENST00000516965 EPG5Q9HCE0 2579 aa0.29□□□□□ -2.36
SNORA48.10-201ENST00000516965 DDX60Q8IY21 1712 aaKnown RBP0.28□□□□□ -2.36
SNORA48.10-201ENST00000516965 KALRNO60229 2985 aa0.28□□□□□ -2.36
SNORA48.10-201ENST00000516965 ANKHD1Q8IWZ3 2542 aaKnown RBP0.28□□□□□ -2.36
SNORA48.10-201ENST00000516965 NBEAL1Q6ZS30 2694 aa0.28□□□□□ -2.37
SNORA48.10-201ENST00000516965 IQGAP1P46940 1657 aa0.27□□□□□ -2.37
SNORA48.10-201ENST00000516965 COL6A3P12111 3177 aa0.27□□□□□ -2.37
SNORA48.10-201ENST00000516965 RIF1Q5UIP0 2472 aaKnown RBP0.27□□□□□ -2.37
SNORA48.10-201ENST00000516965 AKAP9Q99996 3911 aa0.27□□□□□ -2.37
SNORA48.10-201ENST00000516965 PKHD1P08F94 4074 aa0.27□□□□□ -2.37
SNORA48.10-201ENST00000516965 TGP01266 2768 aa0.27□□□□□ -2.37
SNORA48.10-201ENST00000516965 C9orf92A6NGG3 77 aa0.27□□□□□ -2.37
SNORA48.10-201ENST00000516965 TACC2O95359 2948 aa0.27□□□□□ -2.37
SNORA48.10-201ENST00000516965 CUBNO60494 3623 aa0.26□□□□□ -2.37
SNORA48.10-201ENST00000516965 SPRR2BP35325 72 aa0.26□□□□□ -2.37
SNORA48.10-201ENST00000516965 SACSQ9NZJ4 4579 aa0.26□□□□□ -2.37
SNORA48.10-201ENST00000516965 IQGAP2Q13576 1575 aa0.26□□□□□ -2.37
SNORA48.10-201ENST00000516965 KIF21BO75037 1637 aa0.26□□□□□ -2.37
SNORA48.10-201ENST00000516965 FLGP20930 4061 aaPredicted RBP0.26□□□□□ -2.37
SNORA48.10-201ENST00000516965 HMCN2Q8NDA2 5059 aa0.25□□□□□ -2.37
SNORA48.10-201ENST00000516965 NBEAQ8NFP9 2946 aa0.25□□□□□ -2.37
SNORA48.10-201ENST00000516965 STAB2Q8WWQ8 2551 aa0.25□□□□□ -2.37
SNORA48.10-201ENST00000516965 ACACAQ13085 2346 aa0.25□□□□□ -2.37
SNORA48.10-201ENST00000516965 DNAH3Q8TD57 4116 aa0.25□□□□□ -2.37
SNORA48.10-201ENST00000516965 LRP1BQ9NZR2 4599 aa0.25□□□□□ -2.37
SNORA48.10-201ENST00000516965 NBEAL2Q6ZNJ1 2754 aa0.24□□□□□ -2.37
SNORA48.10-201ENST00000516965 NFAT5O94916 1531 aa0.24□□□□□ -2.37
SNORA48.10-201ENST00000516965 SONP18583 2426 aaKnown RBP0.24□□□□□ -2.37
SNORA48.10-201ENST00000516965 ZANQ9Y493 2812 aa0.24□□□□□ -2.37
SNORA48.10-201ENST00000516965 HIVEP1P15822 2718 aa0.24□□□□□ -2.37
SNORA48.10-201ENST00000516965 TEP1Q99973 2627 aaKnown RBP0.24□□□□□ -2.37
SNORA48.10-201ENST00000516965 LRP2P98164 4655 aa0.23□□□□□ -2.37
SNORA48.10-201ENST00000516965 M0QY20 66 aa0.23□□□□□ -2.37
SNORA48.10-201ENST00000516965 HTTP42858 3142 aa0.23□□□□□ -2.37
SNORA48.10-201ENST00000516965 STAB1Q9NY15 2570 aa0.22□□□□□ -2.37
SNORA48.10-201ENST00000516965 WDR87Q6ZQQ6 2873 aa0.22□□□□□ -2.37
SNORA48.10-201ENST00000516965 FAM208AQ9UK61 1670 aaKnown RBP0.22□□□□□ -2.37
SNORA48.10-201ENST00000516965 NBPF19A0A087WUL8 3843 aa0.22□□□□□ -2.37
SNORA48.10-201ENST00000516965 MMP24-AS1A0A0U1RRL7 71 aa0.22□□□□□ -2.37
SNORA48.10-201ENST00000516965 DEFB110Q30KQ9 67 aa0.22□□□□□ -2.37
SNORA48.10-201ENST00000516965 DNAH11Q96DT5 4516 aa0.22□□□□□ -2.37
SNORA48.10-201ENST00000516965 MDN1Q9NU22 5596 aa0.22□□□□□ -2.37
SNORA48.10-201ENST00000516965 A0A0C4DFX4 3053 aa0.22□□□□□ -2.37
SNORA48.10-201ENST00000516965 KMT2DO14686 5537 aa0.21□□□□□ -2.38
SNORA48.10-201ENST00000516965 MYO18BQ8IUG5 2567 aa0.21□□□□□ -2.38
SNORA48.10-201ENST00000516965 APOBP04114 4563 aaKnown RBP0.21□□□□□ -2.38
SNORA48.10-201ENST00000516965 CCDC168Q8NDH2 2452 aa0.21□□□□□ -2.38
SNORA48.10-201ENST00000516965 NDUFA1O15239 70 aa0.21□□□□□ -2.38
SNORA48.10-201ENST00000516965 FAM186AA6NE01 2351 aa0.21□□□□□ -2.38
SNORA48.10-201ENST00000516965 SVEP1Q4LDE5 3571 aa0.21□□□□□ -2.38
SNORA48.10-201ENST00000516965 MUC5ACP98088 5654 aa0.2□□□□□ -2.38
SNORA48.10-201ENST00000516965 ANK3Q12955 4377 aaKnown RBP0.2□□□□□ -2.38
SNORA48.10-201ENST00000516965 DEFB131AP59861 70 aa0.2□□□□□ -2.38
SNORA48.10-201ENST00000516965 KRTAP6-2Q3LI66 62 aa0.2□□□□□ -2.38
SNORA48.10-201ENST00000516965 PKHD1L1Q86WI1 4243 aa0.19□□□□□ -2.38
SNORA48.10-201ENST00000516965 FAT3Q8TDW7 4589 aa0.19□□□□□ -2.38
SNORA48.10-201ENST00000516965 DNAH2Q9P225 4427 aa0.19□□□□□ -2.38
SNORA48.10-201ENST00000516965 SPENQ96T58 3664 aaKnown RBP0.18□□□□□ -2.38
SNORA48.10-201ENST00000516965 TNP1P09430 55 aa0.18□□□□□ -2.38
SNORA48.10-201ENST00000516965 MXRA5Q9NR99 2828 aa0.18□□□□□ -2.38
SNORA48.10-201ENST00000516965 ACACBO00763 2458 aa0.18□□□□□ -2.38
SNORA48.10-201ENST00000516965 MGAM2Q2M2H8 2515 aa0.17□□□□□ -2.38
SNORA48.10-201ENST00000516965 SPRR2AP35326 72 aa0.17□□□□□ -2.38
SNORA48.10-201ENST00000516965 RANBP2P49792 3224 aaKnown RBP0.17□□□□□ -2.38
SNORA48.10-201ENST00000516965 TRPM2O94759 1503 aa0.17□□□□□ -2.38
SNORA48.10-201ENST00000516965 DNAH6Q9C0G6 4158 aa0.16□□□□□ -2.38
SNORA48.10-201ENST00000516965 COL12A1Q99715 3063 aa0.16□□□□□ -2.38
SNORA48.10-201ENST00000516965 A8MTW9 85 aa0.16□□□□□ -2.38
SNORA48.10-201ENST00000516965 SPRR2GQ9BYE4 73 aa0.16□□□□□ -2.38
SNORA48.10-201ENST00000516965 USP9XQ93008 2570 aaPredicted RBP0.16□□□□□ -2.38
SNORA48.10-201ENST00000516965 VPS13DQ5THJ4 4388 aa0.16□□□□□ -2.38
SNORA48.10-201ENST00000516965 CLTCL1P53675 1640 aa0.16□□□□□ -2.38
SNORA48.10-201ENST00000516965 COL6A5A8TX70 2615 aa0.16□□□□□ -2.38
SNORA48.10-201ENST00000516965 DYNC2H1Q8NCM8 4307 aaKnown RBP0.15□□□□□ -2.39
SNORA48.10-201ENST00000516965 M0QZ58 72 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms