RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 LRBAP50851 2863 aa8.95□□□□□ -0.98
ARHGEF28-212ENST00000513042 VCANP13611 3396 aa8.93□□□□□ -0.98
ARHGEF28-212ENST00000513042 MAP1AP78559 2803 aaPredicted RBP8.93□□□□□ -0.98
ARHGEF28-212ENST00000513042 BAHCC1Q9P281 2608 aa8.93□□□□□ -0.98
ARHGEF28-212ENST00000513042 APCP25054 2843 aa8.92□□□□□ -0.98
ARHGEF28-212ENST00000513042 TPRXLQ17RH7 258 aa8.91□□□□□ -0.98
ARHGEF28-212ENST00000513042 UBR5O95071 2799 aaPredicted RBP8.91□□□□□ -0.98
ARHGEF28-212ENST00000513042 KRTAP21-3Q3LHN1 58 aa8.91□□□□□ -0.98
ARHGEF28-212ENST00000513042 NSD1Q96L73 2696 aaPredicted RBP8.87□□□□□ -0.99
ARHGEF28-212ENST00000513042 KMT2BQ9UMN6 2715 aaPredicted RBP8.85□□□□□ -0.99
ARHGEF28-212ENST00000513042 CFAP47Q6ZTR5 3102 aa8.84□□□□□ -0.99
ARHGEF28-212ENST00000513042 LAMA1P25391 3075 aa8.84□□□□□ -0.99
ARHGEF28-212ENST00000513042 CRYBG3Q68DQ2 2970 aa8.83□□□□□ -1
ARHGEF28-212ENST00000513042 KRTAP13-3Q3SY46 172 aa8.83□□□□□ -1
ARHGEF28-212ENST00000513042 PRO2289Q9P1D8 64 aa8.81□□□□□ -1
ARHGEF28-212ENST00000513042 UTP20O75691 2785 aaKnown RBP8.81□□□□□ -1
ARHGEF28-212ENST00000513042 ITPR1Q14643 2758 aa8.81□□□□□ -1
ARHGEF28-212ENST00000513042 HIVEP1P15822 2718 aa8.8□□□□□ -1
ARHGEF28-212ENST00000513042 REV3LO60673 3130 aa8.8□□□□□ -1
ARHGEF28-212ENST00000513042 ATMQ13315 3056 aa8.77□□□□□ -1.01
ARHGEF28-212ENST00000513042 DMXL2Q8TDJ6 3036 aa8.77□□□□□ -1.01
ARHGEF28-212ENST00000513042 ASH1LQ9NR48 2969 aaKnown RBP8.75□□□□□ -1.01
ARHGEF28-212ENST00000513042 TACC2O95359 2948 aa8.75□□□□□ -1.01
ARHGEF28-212ENST00000513042 SPTBN5Q9NRC6 3674 aaKnown RBP8.72□□□□□ -1.01
ARHGEF28-212ENST00000513042 BOD1L1Q8NFC6 3051 aa8.72□□□□□ -1.01
ARHGEF28-212ENST00000513042 KRTAP12-2P59991 146 aa8.7□□□□□ -1.02
ARHGEF28-212ENST00000513042 COL12A1Q99715 3063 aa8.67□□□□□ -1.02
ARHGEF28-212ENST00000513042 ADGRG4Q8IZF6 3080 aa8.65□□□□□ -1.02
ARHGEF28-212ENST00000513042 SPEGQ15772 3267 aa8.63□□□□□ -1.03
ARHGEF28-212ENST00000513042 NBEAQ8NFP9 2946 aa8.62□□□□□ -1.03
ARHGEF28-212ENST00000513042 USP34Q70CQ2 3546 aa8.61□□□□□ -1.03
ARHGEF28-212ENST00000513042 FRYLO94915 3013 aa8.58□□□□□ -1.04
ARHGEF28-212ENST00000513042 ZZEF1O43149 2961 aa8.58□□□□□ -1.04
ARHGEF28-212ENST00000513042 EYSQ5T1H1 3165 aa8.55□□□□□ -1.04
ARHGEF28-212ENST00000513042 CELSR2Q9HCU4 2923 aa8.44□□□□□ -1.06
ARHGEF28-212ENST00000513042 KRTAP13-4Q3LI77 160 aa8.44□□□□□ -1.06
ARHGEF28-212ENST00000513042 KRTAP12-1P59990 96 aa8.41□□□□□ -1.06
ARHGEF28-212ENST00000513042 FLNCQ14315 2725 aa8.4□□□□□ -1.06
ARHGEF28-212ENST00000513042 TENM4Q6N022 2769 aa8.36□□□□□ -1.07
ARHGEF28-212ENST00000513042 DCHS2Q6V1P9 2916 aa8.34□□□□□ -1.07
ARHGEF28-212ENST00000513042 TNRC18O15417 2968 aaPredicted RBP8.33□□□□□ -1.08
ARHGEF28-212ENST00000513042 KRTAP3-1Q9BYR8 98 aa8.3□□□□□ -1.08
ARHGEF28-212ENST00000513042 HRNRQ86YZ3 2850 aaPredicted RBP8.3□□□□□ -1.08
ARHGEF28-212ENST00000513042 KRTAP15-1Q3LI76 137 aa8.27□□□□□ -1.09
ARHGEF28-212ENST00000513042 MYO15AQ9UKN7 3530 aa8.27□□□□□ -1.09
ARHGEF28-212ENST00000513042 NIPBLQ6KC79 2804 aaeCLIP8.25□□□□□ -1.09
ARHGEF28-212ENST00000513042 TGP01266 2768 aa8.24□□□□□ -1.09
ARHGEF28-212ENST00000513042 ASPMQ8IZT6 3477 aa8.24□□□□□ -1.09
ARHGEF28-212ENST00000513042 TENM2Q9NT68 2774 aa8.22□□□□□ -1.09
ARHGEF28-212ENST00000513042 WDFY3Q8IZQ1 3526 aa8.2□□□□□ -1.1
ARHGEF28-212ENST00000513042 DMXL1Q9Y485 3027 aa8.19□□□□□ -1.1
ARHGEF28-212ENST00000513042 ZANQ9Y493 2812 aa8.14□□□□□ -1.11
ARHGEF28-212ENST00000513042 CELSR1Q9NYQ6 3014 aa8.14□□□□□ -1.11
ARHGEF28-212ENST00000513042 DCHS1Q96JQ0 3298 aa8.14□□□□□ -1.11
ARHGEF28-212ENST00000513042 TENM1Q9UKZ4 2725 aa8.13□□□□□ -1.11
ARHGEF28-212ENST00000513042 FBN2P35556 2912 aa8.13□□□□□ -1.11
ARHGEF28-212ENST00000513042 LOC400499M0QZD8 3231 aa8.13□□□□□ -1.11
ARHGEF28-212ENST00000513042 NF1P21359 2839 aa8.09□□□□□ -1.11
ARHGEF28-212ENST00000513042 NBPF19A0A087WUL8 3843 aa8.05□□□□□ -1.12
ARHGEF28-212ENST00000513042 KRTAP10-6P60371 365 aaPredicted RBP8.04□□□□□ -1.12
ARHGEF28-212ENST00000513042 ZFHX4Q86UP3 3567 aa8.01□□□□□ -1.13
ARHGEF28-212ENST00000513042 CSMD1Q96PZ7 3565 aa8.01□□□□□ -1.13
ARHGEF28-212ENST00000513042 RELNP78509 3460 aa8□□□□□ -1.13
ARHGEF28-212ENST00000513042 CRCT1Q9UGL9 99 aa7.99□□□□□ -1.13
ARHGEF28-212ENST00000513042 TENM3Q9P273 2699 aa7.89□□□□□ -1.15
ARHGEF28-212ENST00000513042 ANK3Q12955 4377 aaKnown RBP7.84□□□□□ -1.15
ARHGEF28-212ENST00000513042 MXRA5Q9NR99 2828 aa7.84□□□□□ -1.15
ARHGEF28-212ENST00000513042 LAMA5O15230 3695 aa7.83□□□□□ -1.16
ARHGEF28-212ENST00000513042 KRTAP10-12P60413 245 aa7.78□□□□□ -1.16
ARHGEF28-212ENST00000513042 KRTAP3-3Q9BYR6 98 aa7.73□□□□□ -1.17
ARHGEF28-212ENST00000513042 VWFP04275 2813 aa7.73□□□□□ -1.17
ARHGEF28-212ENST00000513042 KRTAP3-2Q9BYR7 98 aa7.73□□□□□ -1.17
ARHGEF28-212ENST00000513042 MT1HL1P0DM35 61 aa7.72□□□□□ -1.17
ARHGEF28-212ENST00000513042 PKD1L1Q8TDX9 2849 aa7.72□□□□□ -1.17
ARHGEF28-212ENST00000513042 SMG1Q96Q15 3661 aaKnown RBP7.71□□□□□ -1.17
ARHGEF28-212ENST00000513042 INE1O15225 51 aa7.68□□□□□ -1.18
ARHGEF28-212ENST00000513042 PDZD2O15018 2839 aa7.65□□□□□ -1.19
ARHGEF28-212ENST00000513042 KRTAP4-5Q9BYR2 181 aa7.61□□□□□ -1.19
ARHGEF28-212ENST00000513042 HUWE1Q7Z6Z7 4374 aaKnown RBP7.57□□□□□ -1.2
ARHGEF28-212ENST00000513042 LCE3AQ5TA76 89 aa7.56□□□□□ -1.2
ARHGEF28-212ENST00000513042 SVEP1Q4LDE5 3571 aa7.55□□□□□ -1.2
ARHGEF28-212ENST00000513042 KRTAP12-3P60328 96 aa7.54□□□□□ -1.2
ARHGEF28-212ENST00000513042 DMDP11532 3685 aa7.54□□□□□ -1.2
ARHGEF28-212ENST00000513042 SPENQ96T58 3664 aaKnown RBP7.48□□□□□ -1.21
ARHGEF28-212ENST00000513042 ALMS1Q8TCU4 4167 aa7.45□□□□□ -1.22
ARHGEF28-212ENST00000513042 ZFHX3Q15911 3703 aa7.45□□□□□ -1.22
ARHGEF28-212ENST00000513042 LORP23490 312 aaPredicted RBP7.44□□□□□ -1.22
ARHGEF28-212ENST00000513042 KRTAP10-4P60372 401 aaPredicted RBP7.41□□□□□ -1.22
ARHGEF28-212ENST00000513042 MEGF8Q7Z7M0 2845 aa7.38□□□□□ -1.23
ARHGEF28-212ENST00000513042 FBN3Q75N90 2809 aa7.38□□□□□ -1.23
ARHGEF28-212ENST00000513042 CSMD2Q7Z408 3487 aa7.37□□□□□ -1.23
ARHGEF28-212ENST00000513042 FBN1P35555 2871 aaKnown RBP7.36□□□□□ -1.23
ARHGEF28-212ENST00000513042 TRRAPQ9Y4A5 3859 aa7.36□□□□□ -1.23
ARHGEF28-212ENST00000513042 KRTAP10-5P60370 271 aa7.29□□□□□ -1.24
ARHGEF28-212ENST00000513042 CUBNO60494 3623 aa7.29□□□□□ -1.24
ARHGEF28-212ENST00000513042 OTOGQ6ZRI0 2925 aa7.29□□□□□ -1.24
ARHGEF28-212ENST00000513042 KRTAP23-1A1A580 65 aa7.22□□□□□ -1.25
ARHGEF28-212ENST00000513042 VPS13CQ709C8 3753 aa7.2□□□□□ -1.26
ARHGEF28-212ENST00000513042 KRTAP8-1Q8IUC2 63 aa7.19□□□□□ -1.26
ARHGEF28-212ENST00000513042 BSNQ9UPA5 3926 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms