RNA–Protein interactions for RNA: ENST00000510871.5

RBM47-207, Transcript of RNA binding motif protein 47, humanhuman

TSL 1 (best)

Gene RBM47, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-207ENST00000510871 MXRA5Q9NR99 2828 aa8.14□□□□□ -1.11
RBM47-207ENST00000510871 KRTAP7-1Q8IUC3 87 aa8.14□□□□□ -1.11
RBM47-207ENST00000510871 ADM2Q7Z4H4 148 aa8.13□□□□□ -1.11
RBM47-207ENST00000510871 KRTAP10-2P60368 255 aa8.12□□□□□ -1.11
RBM47-207ENST00000510871 LINC00483Q53H64 154 aa8.12□□□□□ -1.11
RBM47-207ENST00000510871 Q6ZR54 194 aa8.12□□□□□ -1.11
RBM47-207ENST00000510871 Q8N1X5 172 aa8.12□□□□□ -1.11
RBM47-207ENST00000510871 KRTAP29-1A8MX34 341 aaPredicted RBP8.11□□□□□ -1.11
RBM47-207ENST00000510871 KRTAP11-1Q8IUC1 163 aa8.1□□□□□ -1.11
RBM47-207ENST00000510871 KRTAP10-1P60331 282 aa8.1□□□□□ -1.11
RBM47-207ENST00000510871 Q6ZRN7 208 aaPredicted RBP8.08□□□□□ -1.12
RBM47-207ENST00000510871 STAB2Q8WWQ8 2551 aa8.07□□□□□ -1.12
RBM47-207ENST00000510871 J3QL48 77 aa8.04□□□□□ -1.12
RBM47-207ENST00000510871 ROMO1P60602 79 aa8.03□□□□□ -1.12
RBM47-207ENST00000510871 SMG1Q96Q15 3661 aaKnown RBP8.01□□□□□ -1.13
RBM47-207ENST00000510871 Q5W150 140 aa8.01□□□□□ -1.13
RBM47-207ENST00000510871 FLG2Q5D862 2391 aaPredicted RBP8.01□□□□□ -1.13
RBM47-207ENST00000510871 NDUFAF8A1L188 74 aa8.01□□□□□ -1.13
RBM47-207ENST00000510871 A0A1B0GU33 70 aa8.01□□□□□ -1.13
RBM47-207ENST00000510871 KRTAP25-1Q3LHN0 102 aa8□□□□□ -1.13
RBM47-207ENST00000510871 SPATA8Q6RVD6 105 aa7.98□□□□□ -1.13
RBM47-207ENST00000510871 A0A0D9SG42 100 aa7.96□□□□□ -1.14
RBM47-207ENST00000510871 SEC61BP60468 96 aaKnown RBP7.94□□□□□ -1.14
RBM47-207ENST00000510871 A0A087X002 238 aa7.94□□□□□ -1.14
RBM47-207ENST00000510871 KRTAP13-1Q8IUC0 172 aa7.93□□□□□ -1.14
RBM47-207ENST00000510871 TENM4Q6N022 2769 aa7.92□□□□□ -1.14
RBM47-207ENST00000510871 CSMD1Q96PZ7 3565 aa7.92□□□□□ -1.14
RBM47-207ENST00000510871 NOTCH2NLQ7Z3S9 236 aa7.89□□□□□ -1.15
RBM47-207ENST00000510871 PDZD2O15018 2839 aa7.86□□□□□ -1.15
RBM47-207ENST00000510871 COX6B2Q6YFQ2 88 aa7.86□□□□□ -1.15
RBM47-207ENST00000510871 CELSR1Q9NYQ6 3014 aa7.84□□□□□ -1.15
RBM47-207ENST00000510871 Q5VSD8 79 aa7.81□□□□□ -1.16
RBM47-207ENST00000510871 Q6ZSA8 131 aa7.81□□□□□ -1.16
RBM47-207ENST00000510871 TENM3Q9P273 2699 aa7.78□□□□□ -1.16
RBM47-207ENST00000510871 KRTAP13-2Q52LG2 175 aa7.77□□□□□ -1.17
RBM47-207ENST00000510871 SVEP1Q4LDE5 3571 aa7.77□□□□□ -1.17
RBM47-207ENST00000510871 TENM1Q9UKZ4 2725 aa7.77□□□□□ -1.17
RBM47-207ENST00000510871 C20orf166-AS1Q96NR2 134 aa7.75□□□□□ -1.17
RBM47-207ENST00000510871 SPENQ96T58 3664 aaKnown RBP7.75□□□□□ -1.17
RBM47-207ENST00000510871 DMBT1Q9UGM3 2413 aaPredicted RBP7.73□□□□□ -1.17
RBM47-207ENST00000510871 BSNQ9UPA5 3926 aa7.72□□□□□ -1.17
RBM47-207ENST00000510871 A8MUU9 505 aa7.71□□□□□ -1.17
RBM47-207ENST00000510871 CAMK2N1Q7Z7J9 78 aa7.71□□□□□ -1.18
RBM47-207ENST00000510871 NBPF19A0A087WUL8 3843 aa7.69□□□□□ -1.18
RBM47-207ENST00000510871 RPL37P61927 97 aaKnown RBP7.69□□□□□ -1.18
RBM47-207ENST00000510871 S4R3F8 94 aa7.68□□□□□ -1.18
RBM47-207ENST00000510871 RPS29P62273 56 aaKnown RBP7.67□□□□□ -1.18
RBM47-207ENST00000510871 H1FX-AS1Q4G0G2 97 aa7.67□□□□□ -1.18
RBM47-207ENST00000510871 OTOGQ6ZRI0 2925 aa7.67□□□□□ -1.18
RBM47-207ENST00000510871 VWFP04275 2813 aa7.66□□□□□ -1.18
RBM47-207ENST00000510871 KRTAP21-3Q3LHN1 58 aa7.64□□□□□ -1.19
RBM47-207ENST00000510871 ANK3Q12955 4377 aaKnown RBP7.59□□□□□ -1.19
RBM47-207ENST00000510871 FBN1P35555 2871 aaKnown RBP7.53□□□□□ -1.2
RBM47-207ENST00000510871 KRTAP1-4P0C5Y4 121 aa7.51□□□□□ -1.21
RBM47-207ENST00000510871 CSMD2Q7Z408 3487 aa7.51□□□□□ -1.21
RBM47-207ENST00000510871 CUBNO60494 3623 aa7.44□□□□□ -1.22
RBM47-207ENST00000510871 ZFHX3Q15911 3703 aa7.44□□□□□ -1.22
RBM47-207ENST00000510871 TENM2Q9NT68 2774 aa7.43□□□□□ -1.22
RBM47-207ENST00000510871 R4GN34 69 aa7.42□□□□□ -1.22
RBM47-207ENST00000510871 M0R2T5 61 aa7.38□□□□□ -1.23
RBM47-207ENST00000510871 TGP01266 2768 aa7.37□□□□□ -1.23
RBM47-207ENST00000510871 PKD1L1Q8TDX9 2849 aa7.34□□□□□ -1.23
RBM47-207ENST00000510871 TRRAPQ9Y4A5 3859 aa7.34□□□□□ -1.23
RBM47-207ENST00000510871 M0QZ58 72 aa7.33□□□□□ -1.24
RBM47-207ENST00000510871 PLAC4Q8WY50 150 aa7.28□□□□□ -1.24
RBM47-207ENST00000510871 H0YAA0 97 aa7.26□□□□□ -1.25
RBM47-207ENST00000510871 VPS13CQ709C8 3753 aa7.23□□□□□ -1.25
RBM47-207ENST00000510871 C10orf95Q9H7T3 257 aa7.22□□□□□ -1.25
RBM47-207ENST00000510871 XP32Q5T750 250 aa7.2□□□□□ -1.26
RBM47-207ENST00000510871 KRTAP13-3Q3SY46 172 aa7.18□□□□□ -1.26
RBM47-207ENST00000510871 A0A1B0GVY2 172 aa7.16□□□□□ -1.26
RBM47-207ENST00000510871 P0C880 135 aa7.15□□□□□ -1.26
RBM47-207ENST00000510871 ZNF469Q96JG9 3925 aaPredicted RBP7.09□□□□□ -1.28
RBM47-207ENST00000510871 FBN3Q75N90 2809 aa7.04□□□□□ -1.28
RBM47-207ENST00000510871 HUWE1Q7Z6Z7 4374 aaKnown RBP7.04□□□□□ -1.28
RBM47-207ENST00000510871 KRTAP10-8P60410 259 aa7.03□□□□□ -1.28
RBM47-207ENST00000510871 TPRXLQ17RH7 258 aa7.02□□□□□ -1.29
RBM47-207ENST00000510871 MEGF8Q7Z7M0 2845 aa7.01□□□□□ -1.29
RBM47-207ENST00000510871 AKAP9Q99996 3911 aa7□□□□□ -1.29
RBM47-207ENST00000510871 SRRM2Q9UQ35 2752 aaKnown RBP6.97□□□□□ -1.29
RBM47-207ENST00000510871 PP632Q6XCG6 107 aa6.85□□□□□ -1.31
RBM47-207ENST00000510871 KRTAP3-1Q9BYR8 98 aa6.8□□□□□ -1.32
RBM47-207ENST00000510871 DNAH9Q9NYC9 4486 aa6.78□□□□□ -1.32
RBM47-207ENST00000510871 KRTAP15-1Q3LI76 137 aa6.77□□□□□ -1.33
RBM47-207ENST00000510871 COL7A1Q02388 2944 aa6.74□□□□□ -1.33
RBM47-207ENST00000510871 TNP1P09430 55 aa6.73□□□□□ -1.33
RBM47-207ENST00000510871 KRTAP12-2P59991 146 aa6.67□□□□□ -1.34
RBM47-207ENST00000510871 CSMD3Q7Z407 3707 aa6.66□□□□□ -1.34
RBM47-207ENST00000510871 KRTAP10-4P60372 401 aaPredicted RBP6.64□□□□□ -1.35
RBM47-207ENST00000510871 PLECQ15149 4684 aaKnown RBP6.62□□□□□ -1.35
RBM47-207ENST00000510871 ALMS1Q8TCU4 4167 aa6.59□□□□□ -1.35
RBM47-207ENST00000510871 DNAH1Q9P2D7 4330 aa6.59□□□□□ -1.35
RBM47-207ENST00000510871 MT1HL1P0DM35 61 aa6.58□□□□□ -1.36
RBM47-207ENST00000510871 KRTAP12-1P59990 96 aa6.57□□□□□ -1.36
RBM47-207ENST00000510871 KRTAP13-4Q3LI77 160 aa6.55□□□□□ -1.36
RBM47-207ENST00000510871 KRTAP10-10P60014 251 aa6.54□□□□□ -1.36
RBM47-207ENST00000510871 PRO2289Q9P1D8 64 aa6.54□□□□□ -1.36
RBM47-207ENST00000510871 KRTAP10-6P60371 365 aaPredicted RBP6.52□□□□□ -1.36
RBM47-207ENST00000510871 DNAH10Q8IVF4 4471 aa6.52□□□□□ -1.37
RBM47-207ENST00000510871 VPS13DQ5THJ4 4388 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms