RNA–Protein interactions for RNA: ENST00000510312.6

ARHGEF28-210, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 8,285 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-210ENST00000510312 LAMA3Q16787 3333 aa4.7□□□□□ -1.66
ARHGEF28-210ENST00000510312 DSPP15924 2871 aaKnown RBP4.69□□□□□ -1.66
ARHGEF28-210ENST00000510312 MGAQ8IWI9 3026 aa4.68□□□□□ -1.66
ARHGEF28-210ENST00000510312 SZT2Q5T011 3432 aa4.68□□□□□ -1.66
ARHGEF28-210ENST00000510312 PRUNE2Q8WUY3 3088 aa4.67□□□□□ -1.66
ARHGEF28-210ENST00000510312 KRTAP1-4P0C5Y4 121 aa4.65□□□□□ -1.66
ARHGEF28-210ENST00000510312 PRO2289Q9P1D8 64 aa4.65□□□□□ -1.67
ARHGEF28-210ENST00000510312 KALRNO60229 2985 aa4.64□□□□□ -1.67
ARHGEF28-210ENST00000510312 KRTAP13-3Q3SY46 172 aa4.64□□□□□ -1.67
ARHGEF28-210ENST00000510312 TPRXLQ17RH7 258 aa4.63□□□□□ -1.67
ARHGEF28-210ENST00000510312 TGP01266 2768 aa4.63□□□□□ -1.67
ARHGEF28-210ENST00000510312 LAMA2P24043 3122 aaKnown RBP4.63□□□□□ -1.67
ARHGEF28-210ENST00000510312 CHD9Q3L8U1 2897 aa4.61□□□□□ -1.67
ARHGEF28-210ENST00000510312 FRYLO94915 3013 aa4.6□□□□□ -1.67
ARHGEF28-210ENST00000510312 NBEAQ8NFP9 2946 aa4.6□□□□□ -1.67
ARHGEF28-210ENST00000510312 ASH1LQ9NR48 2969 aaKnown RBP4.58□□□□□ -1.68
ARHGEF28-210ENST00000510312 REV3LO60673 3130 aa4.58□□□□□ -1.68
ARHGEF28-210ENST00000510312 INE1O15225 51 aa4.57□□□□□ -1.68
ARHGEF28-210ENST00000510312 HIVEP1P15822 2718 aa4.56□□□□□ -1.68
ARHGEF28-210ENST00000510312 WDFY4Q6ZS81 3184 aa4.56□□□□□ -1.68
ARHGEF28-210ENST00000510312 VPS13AQ96RL7 3174 aa4.56□□□□□ -1.68
ARHGEF28-210ENST00000510312 FLNCQ14315 2725 aa4.55□□□□□ -1.68
ARHGEF28-210ENST00000510312 FREM2Q5SZK8 3169 aa4.52□□□□□ -1.69
ARHGEF28-210ENST00000510312 TENM3Q9P273 2699 aa4.52□□□□□ -1.69
ARHGEF28-210ENST00000510312 CRYBG3Q68DQ2 2970 aa4.5□□□□□ -1.69
ARHGEF28-210ENST00000510312 SPEGQ15772 3267 aa4.5□□□□□ -1.69
ARHGEF28-210ENST00000510312 CFAP47Q6ZTR5 3102 aa4.49□□□□□ -1.69
ARHGEF28-210ENST00000510312 KRTAP13-4Q3LI77 160 aa4.48□□□□□ -1.69
ARHGEF28-210ENST00000510312 CELSR2Q9HCU4 2923 aa4.48□□□□□ -1.69
ARHGEF28-210ENST00000510312 TACC2O95359 2948 aa4.48□□□□□ -1.69
ARHGEF28-210ENST00000510312 SPTBN5Q9NRC6 3674 aaKnown RBP4.44□□□□□ -1.7
ARHGEF28-210ENST00000510312 VCANP13611 3396 aa4.44□□□□□ -1.7
ARHGEF28-210ENST00000510312 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
ARHGEF28-210ENST00000510312 PDZD2O15018 2839 aa4.43□□□□□ -1.7
ARHGEF28-210ENST00000510312 COL12A1Q99715 3063 aa4.42□□□□□ -1.7
ARHGEF28-210ENST00000510312 NF1P21359 2839 aa4.41□□□□□ -1.7
ARHGEF28-210ENST00000510312 TNRC18O15417 2968 aaPredicted RBP4.41□□□□□ -1.7
ARHGEF28-210ENST00000510312 USP34Q70CQ2 3546 aa4.41□□□□□ -1.7
ARHGEF28-210ENST00000510312 TENM1Q9UKZ4 2725 aa4.4□□□□□ -1.71
ARHGEF28-210ENST00000510312 LAMA1P25391 3075 aa4.39□□□□□ -1.71
ARHGEF28-210ENST00000510312 KRTAP12-1P59990 96 aa4.38□□□□□ -1.71
ARHGEF28-210ENST00000510312 DMXL2Q8TDJ6 3036 aa4.38□□□□□ -1.71
ARHGEF28-210ENST00000510312 KRTAP12-2P59991 146 aa4.38□□□□□ -1.71
ARHGEF28-210ENST00000510312 DCHS2Q6V1P9 2916 aa4.37□□□□□ -1.71
ARHGEF28-210ENST00000510312 ZANQ9Y493 2812 aa4.36□□□□□ -1.71
ARHGEF28-210ENST00000510312 ZZEF1O43149 2961 aa4.35□□□□□ -1.71
ARHGEF28-210ENST00000510312 ASPMQ8IZT6 3477 aa4.33□□□□□ -1.72
ARHGEF28-210ENST00000510312 ADGRG4Q8IZF6 3080 aa4.33□□□□□ -1.72
ARHGEF28-210ENST00000510312 DCHS1Q96JQ0 3298 aa4.3□□□□□ -1.72
ARHGEF28-210ENST00000510312 SRRM2Q9UQ35 2752 aaKnown RBP4.29□□□□□ -1.72
ARHGEF28-210ENST00000510312 EYSQ5T1H1 3165 aa4.29□□□□□ -1.72
ARHGEF28-210ENST00000510312 TENM2Q9NT68 2774 aa4.29□□□□□ -1.72
ARHGEF28-210ENST00000510312 CRCT1Q9UGL9 99 aa4.28□□□□□ -1.72
ARHGEF28-210ENST00000510312 HRNRQ86YZ3 2850 aaPredicted RBP4.27□□□□□ -1.73
ARHGEF28-210ENST00000510312 KRTAP23-1A1A580 65 aa4.27□□□□□ -1.73
ARHGEF28-210ENST00000510312 CELSR1Q9NYQ6 3014 aa4.26□□□□□ -1.73
ARHGEF28-210ENST00000510312 FBN2P35556 2912 aa4.26□□□□□ -1.73
ARHGEF28-210ENST00000510312 NBPF19A0A087WUL8 3843 aa4.26□□□□□ -1.73
ARHGEF28-210ENST00000510312 BOD1L1Q8NFC6 3051 aa4.25□□□□□ -1.73
ARHGEF28-210ENST00000510312 ATMQ13315 3056 aa4.23□□□□□ -1.73
ARHGEF28-210ENST00000510312 DMXL1Q9Y485 3027 aa4.22□□□□□ -1.73
ARHGEF28-210ENST00000510312 KRTAP10-6P60371 365 aaPredicted RBP4.22□□□□□ -1.73
ARHGEF28-210ENST00000510312 MXRA5Q9NR99 2828 aa4.21□□□□□ -1.73
ARHGEF28-210ENST00000510312 TENM4Q6N022 2769 aa4.21□□□□□ -1.74
ARHGEF28-210ENST00000510312 LOC400499M0QZD8 3231 aa4.2□□□□□ -1.74
ARHGEF28-210ENST00000510312 KRTAP3-1Q9BYR8 98 aa4.19□□□□□ -1.74
ARHGEF28-210ENST00000510312 MYO15AQ9UKN7 3530 aa4.17□□□□□ -1.74
ARHGEF28-210ENST00000510312 PKD1L1Q8TDX9 2849 aa4.15□□□□□ -1.75
ARHGEF28-210ENST00000510312 ANK3Q12955 4377 aaKnown RBP4.13□□□□□ -1.75
ARHGEF28-210ENST00000510312 WDFY3Q8IZQ1 3526 aa4.12□□□□□ -1.75
ARHGEF28-210ENST00000510312 ZFHX3Q15911 3703 aa4.09□□□□□ -1.75
ARHGEF28-210ENST00000510312 KRTAP4-5Q9BYR2 181 aa4.09□□□□□ -1.76
ARHGEF28-210ENST00000510312 CSMD1Q96PZ7 3565 aa4.08□□□□□ -1.76
ARHGEF28-210ENST00000510312 ZFHX4Q86UP3 3567 aa4.04□□□□□ -1.76
ARHGEF28-210ENST00000510312 AKAP9Q99996 3911 aa4.04□□□□□ -1.76
ARHGEF28-210ENST00000510312 VWFP04275 2813 aa4.04□□□□□ -1.76
ARHGEF28-210ENST00000510312 RELNP78509 3460 aa4.04□□□□□ -1.76
ARHGEF28-210ENST00000510312 MEGF8Q7Z7M0 2845 aa4.03□□□□□ -1.76
ARHGEF28-210ENST00000510312 KRTAP3-2Q9BYR7 98 aa4.03□□□□□ -1.76
ARHGEF28-210ENST00000510312 HUWE1Q7Z6Z7 4374 aaKnown RBP4.01□□□□□ -1.77
ARHGEF28-210ENST00000510312 KRTAP10-12P60413 245 aa4.01□□□□□ -1.77
ARHGEF28-210ENST00000510312 LAMA5O15230 3695 aa4.01□□□□□ -1.77
ARHGEF28-210ENST00000510312 MT1HL1P0DM35 61 aa4□□□□□ -1.77
ARHGEF28-210ENST00000510312 ALMS1Q8TCU4 4167 aa3.99□□□□□ -1.77
ARHGEF28-210ENST00000510312 CMYA5Q8N3K9 4069 aa3.97□□□□□ -1.77
ARHGEF28-210ENST00000510312 FBN3Q75N90 2809 aa3.95□□□□□ -1.78
ARHGEF28-210ENST00000510312 KRTAP3-3Q9BYR6 98 aa3.94□□□□□ -1.78
ARHGEF28-210ENST00000510312 COL7A1Q02388 2944 aa3.93□□□□□ -1.78
ARHGEF28-210ENST00000510312 LORP23490 312 aaPredicted RBP3.92□□□□□ -1.78
ARHGEF28-210ENST00000510312 LCE3AQ5TA76 89 aa3.86□□□□□ -1.79
ARHGEF28-210ENST00000510312 SPENQ96T58 3664 aaKnown RBP3.85□□□□□ -1.79
ARHGEF28-210ENST00000510312 KRTAP8-1Q8IUC2 63 aa3.84□□□□□ -1.79
ARHGEF28-210ENST00000510312 KRTAP12-3P60328 96 aa3.83□□□□□ -1.8
ARHGEF28-210ENST00000510312 SMG1Q96Q15 3661 aaKnown RBP3.82□□□□□ -1.8
ARHGEF28-210ENST00000510312 DMDP11532 3685 aa3.8□□□□□ -1.8
ARHGEF28-210ENST00000510312 KRTAP10-5P60370 271 aa3.79□□□□□ -1.8
ARHGEF28-210ENST00000510312 TRRAPQ9Y4A5 3859 aa3.79□□□□□ -1.8
ARHGEF28-210ENST00000510312 CSMD2Q7Z408 3487 aa3.78□□□□□ -1.8
ARHGEF28-210ENST00000510312 KRTAP19-4Q3LI73 84 aa3.77□□□□□ -1.81
ARHGEF28-210ENST00000510312 KRTAP10-4P60372 401 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms