RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 CYB5AP00167 134 aa-0.52□□□□□ -2.49
HMGB1P28-201ENST00000507778 SMR3BP02814 79 aaPredicted RBP-0.52□□□□□ -2.49
HMGB1P28-201ENST00000507778 IFI6P09912 130 aa-0.52□□□□□ -2.49
HMGB1P28-201ENST00000507778 C3orf79P0CE67 100 aa-0.52□□□□□ -2.49
HMGB1P28-201ENST00000507778 HMGN3Q15651 99 aa-0.52□□□□□ -2.49
HMGB1P28-201ENST00000507778 COX6B2Q6YFQ2 88 aa-0.52□□□□□ -2.49
HMGB1P28-201ENST00000507778 SMG1Q96Q15 3661 aaKnown RBP-0.52□□□□□ -2.49
HMGB1P28-201ENST00000507778 SMARCA2P51531 1590 aa-0.53□□□□□ -2.49
HMGB1P28-201ENST00000507778 TTC37Q6PGP7 1564 aa-0.53□□□□□ -2.49
HMGB1P28-201ENST00000507778 BPTFQ12830 3046 aa-0.53□□□□□ -2.49
HMGB1P28-201ENST00000507778 CCNB3Q8WWL7 1395 aa-0.53□□□□□ -2.49
HMGB1P28-201ENST00000507778 MYMXA0A1B0GTQ4 84 aa-0.53□□□□□ -2.49
HMGB1P28-201ENST00000507778 SFTA3P0C7M3 94 aa-0.53□□□□□ -2.49
HMGB1P28-201ENST00000507778 RBP2P50120 134 aa-0.53□□□□□ -2.49
HMGB1P28-201ENST00000507778 MT1XP80297 61 aa-0.53□□□□□ -2.49
HMGB1P28-201ENST00000507778 SNHG12Q9BXW3 62 aa-0.53□□□□□ -2.49
HMGB1P28-201ENST00000507778 DPY30Q9C005 99 aa-0.53□□□□□ -2.49
HMGB1P28-201ENST00000507778 CROCC2H7BZ55 1655 aa-0.53□□□□□ -2.49
HMGB1P28-201ENST00000507778 IQGAP3Q86VI3 1631 aa-0.53□□□□□ -2.49
HMGB1P28-201ENST00000507778 DIP2AQ14689 1571 aa-0.53□□□□□ -2.49
HMGB1P28-201ENST00000507778 CDC42BPGQ6DT37 1551 aa-0.53□□□□□ -2.49
HMGB1P28-201ENST00000507778 INO80Q9ULG1 1556 aaPredicted RBP-0.53□□□□□ -2.49
HMGB1P28-201ENST00000507778 ASXL1Q8IXJ9 1541 aa-0.54□□□□□ -2.5
HMGB1P28-201ENST00000507778 KDM5DQ9BY66 1539 aa-0.54□□□□□ -2.5
HMGB1P28-201ENST00000507778 HFM1A2PYH4 1435 aa-0.54□□□□□ -2.5
HMGB1P28-201ENST00000507778 COL6A5A8TX70 2615 aa-0.54□□□□□ -2.5
HMGB1P28-201ENST00000507778 TRRAPQ9Y4A5 3859 aa-0.54□□□□□ -2.5
HMGB1P28-201ENST00000507778 CEBPZOSA8MTT3 80 aa-0.54□□□□□ -2.5
HMGB1P28-201ENST00000507778 LYNX1G3V0Z9 82 aa-0.54□□□□□ -2.5
HMGB1P28-201ENST00000507778 LINC00032P0C843 101 aa-0.54□□□□□ -2.5
HMGB1P28-201ENST00000507778 MT1GP13640 62 aa-0.54□□□□□ -2.5
HMGB1P28-201ENST00000507778 NREPQ16612 68 aa-0.54□□□□□ -2.5
HMGB1P28-201ENST00000507778 CLPSL2Q6UWE3 100 aa-0.54□□□□□ -2.5
HMGB1P28-201ENST00000507778 TCEAL7Q9BRU2 100 aa-0.54□□□□□ -2.5
HMGB1P28-201ENST00000507778 ITPR1Q14643 2758 aa-0.54□□□□□ -2.5
HMGB1P28-201ENST00000507778 MAST1Q9Y2H9 1570 aa-0.54□□□□□ -2.5
HMGB1P28-201ENST00000507778 CHD7Q9P2D1 2997 aa-0.54□□□□□ -2.5
HMGB1P28-201ENST00000507778 CCDC88BA6NC98 1476 aa-0.54□□□□□ -2.5
HMGB1P28-201ENST00000507778 ARHGAP35Q9NRY4 1499 aa-0.54□□□□□ -2.5
HMGB1P28-201ENST00000507778 SPTAN1Q13813 2472 aaKnown RBP-0.55□□□□□ -2.5
HMGB1P28-201ENST00000507778 MADDQ8WXG6 1647 aa-0.55□□□□□ -2.5
HMGB1P28-201ENST00000507778 M0R143 59 aa-0.55□□□□□ -2.5
HMGB1P28-201ENST00000507778 S100PP25815 95 aa-0.55□□□□□ -2.5
HMGB1P28-201ENST00000507778 LMTK2Q8IWU2 1503 aa-0.55□□□□□ -2.5
HMGB1P28-201ENST00000507778 ADGRG4Q8IZF6 3080 aa-0.56□□□□□ -2.5
HMGB1P28-201ENST00000507778 UMAD1C9J7I0 102 aa-0.56□□□□□ -2.5
HMGB1P28-201ENST00000507778 GYPAP02724 150 aa-0.56□□□□□ -2.5
HMGB1P28-201ENST00000507778 TNP1P09430 55 aa-0.56□□□□□ -2.5
HMGB1P28-201ENST00000507778 IFI27P40305 119 aaPredicted RBP-0.56□□□□□ -2.5
HMGB1P28-201ENST00000507778 RPS27P42677 84 aaKnown RBP-0.56□□□□□ -2.5
HMGB1P28-201ENST00000507778 SMIM11AP58511 58 aa-0.56□□□□□ -2.5
HMGB1P28-201ENST00000507778 RPS27LQ71UM5 84 aaKnown RBP-0.56□□□□□ -2.5
HMGB1P28-201ENST00000507778 DCAF1Q9Y4B6 1507 aa-0.56□□□□□ -2.5
HMGB1P28-201ENST00000507778 MYO9AB2RTY4 2548 aa-0.57□□□□□ -2.5
HMGB1P28-201ENST00000507778 CEP295Q9C0D2 2601 aa-0.57□□□□□ -2.5
HMGB1P28-201ENST00000507778 IGLV5-48A0A075B6I7 105 aa-0.57□□□□□ -2.5
HMGB1P28-201ENST00000507778 NDUFB1O75438 58 aa-0.57□□□□□ -2.5
HMGB1P28-201ENST00000507778 FCER1GP30273 86 aa-0.57□□□□□ -2.5
HMGB1P28-201ENST00000507778 WT1-ASQ06250 92 aa-0.57□□□□□ -2.5
HMGB1P28-201ENST00000507778 MINOS1Q5TGZ0 78 aa-0.57□□□□□ -2.5
HMGB1P28-201ENST00000507778 KRTAP8-1Q8IUC2 63 aa-0.57□□□□□ -2.5
HMGB1P28-201ENST00000507778 ACBD7Q8N6N7 88 aa-0.57□□□□□ -2.5
HMGB1P28-201ENST00000507778 S100A16Q96FQ6 103 aaKnown RBP-0.57□□□□□ -2.5
HMGB1P28-201ENST00000507778 RABAC1Q9UI14 185 aa-0.57□□□□□ -2.5
HMGB1P28-201ENST00000507778 ALS2Q96Q42 1657 aa-0.57□□□□□ -2.5
HMGB1P28-201ENST00000507778 VPS8Q8N3P4 1428 aa-0.57□□□□□ -2.5
HMGB1P28-201ENST00000507778 ABCA9Q8IUA7 1624 aa-0.57□□□□□ -2.5
HMGB1P28-201ENST00000507778 ABCA8O94911 1581 aa-0.57□□□□□ -2.5
HMGB1P28-201ENST00000507778 CFAP74Q9C0B2 1584 aa-0.57□□□□□ -2.5
HMGB1P28-201ENST00000507778 CSMD2Q7Z408 3487 aa-0.58□□□□□ -2.5
HMGB1P28-201ENST00000507778 RALGAPBQ86X10 1494 aa-0.58□□□□□ -2.5
HMGB1P28-201ENST00000507778 A0A087WXM4 84 aa-0.58□□□□□ -2.5
HMGB1P28-201ENST00000507778 MMP24-AS1A0A0U1RRL7 71 aa-0.58□□□□□ -2.5
HMGB1P28-201ENST00000507778 CRIP1P50238 77 aa-0.58□□□□□ -2.5
HMGB1P28-201ENST00000507778 PKIAP61925 76 aa-0.58□□□□□ -2.5
HMGB1P28-201ENST00000507778 SNRPFP62306 86 aaKnown RBP-0.58□□□□□ -2.5
HMGB1P28-201ENST00000507778 LINC00643Q86TS7 51 aa-0.58□□□□□ -2.5
HMGB1P28-201ENST00000507778 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.58□□□□□ -2.5
HMGB1P28-201ENST00000507778 KIF21BO75037 1637 aa-0.59□□□□□ -2.5
HMGB1P28-201ENST00000507778 LRBAP50851 2863 aa-0.59□□□□□ -2.5
HMGB1P28-201ENST00000507778 DEFB131BA0A096LNP1 70 aa-0.59□□□□□ -2.5
HMGB1P28-201ENST00000507778 PVALEFA0A1B0GWK0 134 aa-0.59□□□□□ -2.5
HMGB1P28-201ENST00000507778 MT1EP04732 61 aa-0.59□□□□□ -2.5
HMGB1P28-201ENST00000507778 SMIM13P0DJ93 91 aa-0.59□□□□□ -2.5
HMGB1P28-201ENST00000507778 TDRG1Q3Y452 100 aa-0.59□□□□□ -2.5
HMGB1P28-201ENST00000507778 UBL5Q9BZL1 73 aa-0.59□□□□□ -2.5
HMGB1P28-201ENST00000507778 C6orf48Q9UBA6 75 aa-0.59□□□□□ -2.5
HMGB1P28-201ENST00000507778 MYO15AQ9UKN7 3530 aa-0.59□□□□□ -2.5
HMGB1P28-201ENST00000507778 ABCC6O95255 1503 aa-0.59□□□□□ -2.5
HMGB1P28-201ENST00000507778 CFAP46Q8IYW2 2715 aa-0.59□□□□□ -2.5
HMGB1P28-201ENST00000507778 PREX2Q70Z35 1606 aa-0.6□□□□□ -2.5
HMGB1P28-201ENST00000507778 CD163L1Q9NR16 1453 aa-0.6□□□□□ -2.5
HMGB1P28-201ENST00000507778 ZFHX4Q86UP3 3567 aa-0.6□□□□□ -2.51
HMGB1P28-201ENST00000507778 ATP5EP2Q5VTU8 51 aa-0.6□□□□□ -2.51
HMGB1P28-201ENST00000507778 ENHOQ6UWT2 76 aa-0.6□□□□□ -2.51
HMGB1P28-201ENST00000507778 MT1LQ93083 61 aa-0.6□□□□□ -2.51
HMGB1P28-201ENST00000507778 KCNQ1DNQ9H478 68 aa-0.6□□□□□ -2.51
HMGB1P28-201ENST00000507778 Q9H521 79 aa-0.6□□□□□ -2.51
HMGB1P28-201ENST00000507778 GLI2P10070 1586 aa-0.61□□□□□ -2.51
HMGB1P28-201ENST00000507778 TIAM1Q13009 1591 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms